Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0732100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:30003190:30014029:1 gene:Os03g0732100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Homeodomain protein JUBEL1. (Os03t0732100-01)
Sequence	ATGGGAATAGCGGCGCCACCGTGTCAGCCAGGGCAGACCACCACGTTCGTCATAAGCCAA CCCACCAGCAGCAAGAGCTCCCCGGCGGCGATCGTCGTCCGGCCGCCGGCCACGGCGAGT TCTTCTTCTATGTCCCACTCCCAGGGTTTCCACCAGCCCAGCAGCGGCGCCGTCTTCGGC TTCTCCTCCGATGGCTTCGACGGCCGCCCCGGCTCCGGCCAAGACCACCAGCAGCACGAG CAGCAGCAGCAGCAGCACGTGGCGCAGCAGAGCCGCCGCGACAAGCTGAGGGTGCAAGGC TTCGACCCGGCGGCGGCGGCGGCGGGGCACGGGTTGCTCCCCATCGAGGGCGACGAGCAT GGCGCGGAGCCCGGCGCCATGTACGACCACGCGGAGGCGGCGGCGGCCGGGGCGTCGAAC ATGCTCTCCGAGATGTTCAACTTCCCGTCGCAGCCGCCGACGGGCCCCTCCGCCACCGAG CTGCTCGCCAGCCAGATGAACGCCAACTACCGGTTCGGGTTCCGGCAGGCGGCGGGTTTG GCCGGCGGCGAAGGCGGTTGGTTCGGCGGCGGCGGCGCGGCCGGCCGGACTGGGTTGGTG CTCGGTGGGGCCAGCTTGGGTTCGTTAGGTGAGACGTCGTCGCCGAAGCAGCAAGCGAGC GGCATGGCGGGCCTCGCCGCTGACCCGGCCGCGGCGATGCACCTGTTCCTGATGAACCCG CAGCAGCAGCAGCAGCAGCAGTCACGGTCGTCGACGTCGCCGCCGCCGTCGGACGCGCAG TCGGCAATCCACCAGCACCACGAAGCGTTCCAGGCGTTCGGCGGCGCCGGTGCAGCAGCG TTCGGCGGCGGCGCGGCGGCCGGCGTGGTGGAAGGCCAGGGGCTCTCCCTCTCGCTGTCG CCGTCGCTGCAGCAGCTGGAGATGGCGAAGCAGGCGGAGGAGCTGCGCGTCCGCGACGGC GTGCTCTACTTCAACCGGCAACAGCAGCAGCAGCAGGCGGCGGCGGCGGCGGCGTCGGTG CAGCAGCAGCTCCCGATGGCATTGCACGGGCAGGTCGGCGTGCTGGGGCAGCAGCTGCAC GGCGGCGGGTACGGCGGCCCGGCGGGCGTCGCCGGCGTCCTCCGCAACTCCAAGTACACC CGCGCGGCGCAGGAGCTCCTCGAGGAGTTCTGCAGCGTCGGCCGCGGCCAGATCAAGGGC GGCGGCGGCCGCGGCTCCGCCCCCAATAACCCTAACTCCAGCAAGGCCGCCGCCTCCAGC TCCGGCGCCGCCCAGTCCCCCTCGTCGGCGTCCAAAGAACCCCCTCAACTCTCCCCCGCC GACCGCTTCGAGCACCAGCGCAAGAAGGCCAAGCTCATCTCCATGCTCGACGAGGTGGAC AGGAGGTACAACCACTACTGCGACCAGATGCAGATGGTGGTGAACTTCTTCGACTCGGTG ATGGGGTTCGGGGCGGCGACGCCGTACACGGCGCTGGCGCAGAAGGCCATGTCGAGGCAC TTCCGGTGCCTCAAGGACGCGATCGCGGCGCAGCTGAGGGGGACGTGCGAGGCGCTGGGG GAGAAGGACGCCGGCACGGGGTCGGGGCTGACCAAGGGGGAGACGCCGCGGCTGCGGGCC ATCGACCAGAGCCTCCGGCAGCAGCGCGCCTTCCACCACATGGGGATCATGGAGCAGGAG GCGTGGCGCCCCCAGCGCGGCCTCCCCGAGCGCTCCGTCAACATCCTCCGCTCCTGGCTC TTCGAACACTTCCTCCACCCGTACCCGAGCGATGCAGATAAGCACCTGTTGGCGAGGCAG ACCGGGCTGTCCAGGAACCAGGTCTCGAATTGGTTCATCAACGCCCGTGTCCGGCTATGG AAGCCCATGATCGAGGAGATGTACCAGCAAGAATGCAAGGAGCTCGAGGGCTCCTCCGGC GCCGGCGACGACCCCTCCGGCGCCGACGACACGCACTCGCCGACGACCACCGCCGCCGCG CATCATCAGCACAGGCACGGCCAGCTAATGGTAGAGCACGGCGGCGCGTCCAGCGGCGGC GGCGCCGCCATGTCGTCGCACAAGCACGAGCCCGGCGTCGTCGCGGGGCCCTCCTCGTCG TCGGCGGCGGCGGTGGCGGACGCCGCCTTCGTCGGCATCGACCCGGTGGAGCTCCTCGGC GGCGACGGCGCGGCGGCCGACGACCTGTACGGGCGGTTCGACCCGGCCGGCGCCGTCAGG GTGCGGTACGGGCCGGCGGGCGCCGCCGCCGGCGCCGCCGCGGCGGCGGCCGGCGACGTG TCGCTGACGCTGGGCCTGCAGCACGCCGGCGCCGGCAACGCCGGGCCCGACGGCAGCGGC CGCTTCTCCTTGCGAGACTACAGTGGTTGCTGA

Peptide Sequence

PEP ID	Os03t0732100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:30003190:30014029:1 gene:Os03g0732100 transcript:Os03t0732100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Homeodomain protein JUBEL1. (Os03t0732100-01)
Sequence	MGIAAPPCQPGQTTTFVISQPTSSKSSPAAIVVRPPATASSSSMSHSQGFHQPSSGAVFG FSSDGFDGRPGSGQDHQQHEQQQQQHVAQQSRRDKLRVQGFDPAAAAAGHGLLPIEGDEH GAEPGAMYDHAEAAAAGASNMLSEMFNFPSQPPTGPSATELLASQMNANYRFGFRQAAGL AGGEGGWFGGGGAAGRTGLVLGGASLGSLGETSSPKQQASGMAGLAADPAAAMHLFLMNP QQQQQQQSRSSTSPPPSDAQSAIHQHHEAFQAFGGAGAAAFGGGAAAGVVEGQGLSLSLS PSLQQLEMAKQAEELRVRDGVLYFNRQQQQQQAAAAAASVQQQLPMALHGQVGVLGQQLH GGGYGGPAGVAGVLRNSKYTRAAQELLEEFCSVGRGQIKGGGGRGSAPNNPNSSKAAASS SGAAQSPSSASKEPPQLSPADRFEHQRKKAKLISMLDEVDRRYNHYCDQMQMVVNFFDSV MGFGAATPYTALAQKAMSRHFRCLKDAIAAQLRGTCEALGEKDAGTGSGLTKGETPRLRA IDQSLRQQRAFHHMGIMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQ TGLSRNQVSNWFINARVRLWKPMIEEMYQQECKELEGSSGAGDDPSGADDTHSPTTTAAA HHQHRHGQLMVEHGGASSGGGAAMSSHKHEPGVVAGPSSSSAAAVADAAFVGIDPVELLG GDGAAADDLYGRFDPAGAVRVRYGPAGAAAGAAAAAAGDVSLTLGLQHAGAGNAGPDGSG RFSLRDYSGC

Transcript Sequence

Transcript ID	Os03t0732100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30003190:30014029:1 gene:Os03g0732100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Homeodomain protein JUBEL1. (Os03t0732100-01)
Sequence	TTCACTTTCAGAAGGCGATTGTACAAGGCTGCTTCTGTGCCCGACCAGACAAGGGAAGCT AAGCACCATCACCAGCAGCTACTAGGTGGAGGAGGAGGAGGAGGAGAAAAAAAATATAGA GTTAGTCACAGCTCAGGCAGGGAGAGACAGAGAGAGAGAAAGAGATTTTTGAGAGAGAGA GACAGACATGGAGAGGAGGAGGTCTCGGAGGCAGCAAGCCTTTCACCCCGTCTCCGAGAT AACGATGTACTCCTCATCTTAGGTAGCTGCGGAGGAGGAAGAAGAAGAGGGGTTGGTTGT TGTTGGCCGGAGGAGCACCGCCGACGATGGTGACAGTGGCGCCGCCGGCATGGGAATAGC GGCGCCACCGTGTCAGCCAGGGCAGACCACCACGTTCGTCATAAGCCAACCCACCAGCAG CAAGAGCTCCCCGGCGGCGATCGTCGTCCGGCCGCCGGCCACGGCGAGTTCTTCTTCTAT GTCCCACTCCCAGGGTTTCCACCAGCCCAGCAGCGGCGCCGTCTTCGGCTTCTCCTCCGA TGGCTTCGACGGCCGCCCCGGCTCCGGCCAAGACCACCAGCAGCACGAGCAGCAGCAGCA GCAGCACGTGGCGCAGCAGAGCCGCCGCGACAAGCTGAGGGTGCAAGGCTTCGACCCGGC GGCGGCGGCGGCGGGGCACGGGTTGCTCCCCATCGAGGGCGACGAGCATGGCGCGGAGCC CGGCGCCATGTACGACCACGCGGAGGCGGCGGCGGCCGGGGCGTCGAACATGCTCTCCGA GATGTTCAACTTCCCGTCGCAGCCGCCGACGGGCCCCTCCGCCACCGAGCTGCTCGCCAG CCAGATGAACGCCAACTACCGGTTCGGGTTCCGGCAGGCGGCGGGTTTGGCCGGCGGCGA AGGCGGTTGGTTCGGCGGCGGCGGCGCGGCCGGCCGGACTGGGTTGGTGCTCGGTGGGGC CAGCTTGGGTTCGTTAGGTGAGACGTCGTCGCCGAAGCAGCAAGCGAGCGGCATGGCGGG CCTCGCCGCTGACCCGGCCGCGGCGATGCACCTGTTCCTGATGAACCCGCAGCAGCAGCA GCAGCAGCAGTCACGGTCGTCGACGTCGCCGCCGCCGTCGGACGCGCAGTCGGCAATCCA CCAGCACCACGAAGCGTTCCAGGCGTTCGGCGGCGCCGGTGCAGCAGCGTTCGGCGGCGG CGCGGCGGCCGGCGTGGTGGAAGGCCAGGGGCTCTCCCTCTCGCTGTCGCCGTCGCTGCA GCAGCTGGAGATGGCGAAGCAGGCGGAGGAGCTGCGCGTCCGCGACGGCGTGCTCTACTT CAACCGGCAACAGCAGCAGCAGCAGGCGGCGGCGGCGGCGGCGTCGGTGCAGCAGCAGCT CCCGATGGCATTGCACGGGCAGGTCGGCGTGCTGGGGCAGCAGCTGCACGGCGGCGGGTA CGGCGGCCCGGCGGGCGTCGCCGGCGTCCTCCGCAACTCCAAGTACACCCGCGCGGCGCA GGAGCTCCTCGAGGAGTTCTGCAGCGTCGGCCGCGGCCAGATCAAGGGCGGCGGCGGCCG CGGCTCCGCCCCCAATAACCCTAACTCCAGCAAGGCCGCCGCCTCCAGCTCCGGCGCCGC CCAGTCCCCCTCGTCGGCGTCCAAAGAACCCCCTCAACTCTCCCCCGCCGACCGCTTCGA GCACCAGCGCAAGAAGGCCAAGCTCATCTCCATGCTCGACGAGGTGGACAGGAGGTACAA CCACTACTGCGACCAGATGCAGATGGTGGTGAACTTCTTCGACTCGGTGATGGGGTTCGG GGCGGCGACGCCGTACACGGCGCTGGCGCAGAAGGCCATGTCGAGGCACTTCCGGTGCCT CAAGGACGCGATCGCGGCGCAGCTGAGGGGGACGTGCGAGGCGCTGGGGGAGAAGGACGC CGGCACGGGGTCGGGGCTGACCAAGGGGGAGACGCCGCGGCTGCGGGCCATCGACCAGAG CCTCCGGCAGCAGCGCGCCTTCCACCACATGGGGATCATGGAGCAGGAGGCGTGGCGCCC CCAGCGCGGCCTCCCCGAGCGCTCCGTCAACATCCTCCGCTCCTGGCTCTTCGAACACTT CCTCCACCCGTACCCGAGCGATGCAGATAAGCACCTGTTGGCGAGGCAGACCGGGCTGTC CAGGAACCAGGTCTCGAATTGGTTCATCAACGCCCGTGTCCGGCTATGGAAGCCCATGAT CGAGGAGATGTACCAGCAAGAATGCAAGGAGCTCGAGGGCTCCTCCGGCGCCGGCGACGA CCCCTCCGGCGCCGACGACACGCACTCGCCGACGACCACCGCCGCCGCGCATCATCAGCA CAGGCACGGCCAGCTAATGGTAGAGCACGGCGGCGCGTCCAGCGGCGGCGGCGCCGCCAT GTCGTCGCACAAGCACGAGCCCGGCGTCGTCGCGGGGCCCTCCTCGTCGTCGGCGGCGGC GGTGGCGGACGCCGCCTTCGTCGGCATCGACCCGGTGGAGCTCCTCGGCGGCGACGGCGC GGCGGCCGACGACCTGTACGGGCGGTTCGACCCGGCCGGCGCCGTCAGGGTGCGGTACGG GCCGGCGGGCGCCGCCGCCGGCGCCGCCGCGGCGGCGGCCGGCGACGTGTCGCTGACGCT GGGCCTGCAGCACGCCGGCGCCGGCAACGCCGGGCCCGACGGCAGCGGCCGCTTCTCCTT GCGAGACTACAGTGGTTGCTGATCATTTCTGCATACTACACACCTACCTATCCATCCATG ATTTGGCTCATCCATGCATTGCACTTGGAGCACTAGAGTGAGAAGAAGATCTAGAGAGAG AAACAAAAAAAGTTACAGCAAGGAGAGAGAAATTAAAAGAGATCAAGCATCAGAGATCTC TAGAGAGAGAGATTAATTTGCAAAATGGTGCCTAGCCTTGGAGGTGATGGATGCATATGC ATGCATGGGATGGGGAGAAATATTAATATGAGAGAACTCTCCTTCTTTTTTCCAAGATGA TTCTTAATTTAGCTAGATTAATTCCTTTAGTTTAGGCATTATTGTTGGGGGGTTAAGGAT AATTTGTATACAGGAAAGAAAGATAGGAGGAAGTGTATGTTATAGATTGTTTAGTCACAC ATTTTGTTGTTCTCTCTGTTGCTTGCCCCCTCTACATCTTTTGTTTTTGTCAGTTTTTGG TCTTGGTGTATACTTATTAATGTTCTTTCCATCTCTGTAACTAAACATAAGAAACACATA CATACATACGTAAATACATATATATTGG