Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0731900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:29950669:29953904:-1 gene:Os03g0731900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, HMBDP reductase description:Similar to Isopentenyl/dimethylallyl diphosphate synthase (Fragment). (Os03t0731900-01)
Sequence	ATGGCGACCATCACCACGCAGCTCCGGTCGGCCCTCCTCTCGCCGGCGGCCTCGCCGAGC CGCCGTGCCAGGCGCGCCCCGTCGTCCGTGCGGTGCGACTCCTCGGCAGCGTCGTCCCTG TCCGCCTCCGCGTCGCTCGACGCCGACTTCGACAAGAAGCAGTTCCGCCACAACCTCACC CGCAGCGACAACTACAACCGCAAGGGCTTCGGCCACAAGAAGGAGACGCTCGAGCTCATG AGCCAGGAGTACACCAGCGACGTGATCAAGACGCTCAAGGAGAACGGGAACCAGCACACG TGGGGCCCCGTGACGGTGAAGCTGGCGGAGGCGTACGGCTTCTGCTGGGGCGTCGAGCGC GCCGTGCAGATCGCCTACGAGGCGCGCAAGCAGTTCCCCGACGATCGCATCTGGCTCACC AACGAGATCATCCACAACCCCACCGTCAACAAGCGATTGGAGGACATGGGCGTCCAAAAC ATTCCTGTTGATGCAGGTATTAAGGATTTCGATGTTGTCGAGCAAGGGGATGTTGTCGTA TTGCCTGCATTTGGAGCGGCCGTGGAGGAGATGTACACGCTGAATGAGAAGAAGGTGCAG ATAGTCGATACAACGTGCCCTTGGGTTTCAAAGGTGTGGAACATGGTTGAAAAGCACAAG AAGGGTGACTACACTTCTATTATTCATGGAAAATACTCCCATGAAGAAACTGTTGCCACT GCTTCCTTTGCAGGGACATACATCATTGTTAAGAACATAGCAGAGGCTAGCTATGTATGT GATTATATACTTGGTGGCCAACTTGATGGTTCTAGCTCCACAAAAGAGGAGTTCCTTGAG AAATTCAAAAATGCTGTTTCTCCAGGATTTGATCCTGATGTTGACTTAGTGAAAGTTGGC ATTGCCAATCAAACAACAATGCTTAAAGGAGAAACTGAAGAAATTGGGAAGCTTGTTGAG AAGACAATGATGCGTAGGTTTGGAGTTGAGAATGTCAATGACCACTTCATTGCCTTCAAC ACTATCTGTGATGCCACACAGGAAAGACAAGATGCAATGTACCAGCTAGTGAAGGAGAAA GTTGATCTTATTCTGGTTGTTGGAGGATGGAACTCCAGTAACACCTCTCATTTGCAAGAA ATTGGAGAACTCAGTGGAATTCCGTCTTACTGGATTGACAGTGAACAAAGGATTGGACCT GGAAACAAGATCAGCTACAAGTTAAATCATGGCGAGCTTGTCGAGAAAGAGAACTGGTTA CCAGAAGGCCCTATCACAATCGGAGTTACTTCTGGCGCCTCAACTCCGGACAAGGTTGTT GAGGATGCGTTACAGAAGGTGTTTGAGATCAAGCGCCAGGAAGTTTTGCAGGCCGCGTAA

Peptide Sequence

PEP ID	Os03t0731900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:29950669:29953904:-1 gene:Os03g0731900 transcript:Os03t0731900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, HMBDP reductase description:Similar to Isopentenyl/dimethylallyl diphosphate synthase (Fragment). (Os03t0731900-01)
Sequence	MATITTQLRSALLSPAASPSRRARRAPSSVRCDSSAASSLSASASLDADFDKKQFRHNLT RSDNYNRKGFGHKKETLELMSQEYTSDVIKTLKENGNQHTWGPVTVKLAEAYGFCWGVER AVQIAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVV LPAFGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVAT ASFAGTYIIVKNIAEASYVCDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVG IANQTTMLKGETEEIGKLVEKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEK VDLILVVGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWL PEGPITIGVTSGASTPDKVVEDALQKVFEIKRQEVLQAA

Transcript Sequence

Transcript ID	Os03t0731900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29950669:29953904:-1 gene:Os03g0731900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, HMBDP reductase description:Similar to Isopentenyl/dimethylallyl diphosphate synthase (Fragment). (Os03t0731900-01)
Sequence	GGGGAGATCCCAACTCCGAATCCGACGCACCCACACCCATCCACTCCAGAGCTCCCCGCG GCACTTGGCACCACCACCACCACCACCGGCATCCGGCGGCGCGGGCGGTGATGGCGACCA TCACCACGCAGCTCCGGTCGGCCCTCCTCTCGCCGGCGGCCTCGCCGAGCCGCCGTGCCA GGCGCGCCCCGTCGTCCGTGCGGTGCGACTCCTCGGCAGCGTCGTCCCTGTCCGCCTCCG CGTCGCTCGACGCCGACTTCGACAAGAAGCAGTTCCGCCACAACCTCACCCGCAGCGACA ACTACAACCGCAAGGGCTTCGGCCACAAGAAGGAGACGCTCGAGCTCATGAGCCAGGAGT ACACCAGCGACGTGATCAAGACGCTCAAGGAGAACGGGAACCAGCACACGTGGGGCCCCG TGACGGTGAAGCTGGCGGAGGCGTACGGCTTCTGCTGGGGCGTCGAGCGCGCCGTGCAGA TCGCCTACGAGGCGCGCAAGCAGTTCCCCGACGATCGCATCTGGCTCACCAACGAGATCA TCCACAACCCCACCGTCAACAAGCGATTGGAGGACATGGGCGTCCAAAACATTCCTGTTG ATGCAGGTATTAAGGATTTCGATGTTGTCGAGCAAGGGGATGTTGTCGTATTGCCTGCAT TTGGAGCGGCCGTGGAGGAGATGTACACGCTGAATGAGAAGAAGGTGCAGATAGTCGATA CAACGTGCCCTTGGGTTTCAAAGGTGTGGAACATGGTTGAAAAGCACAAGAAGGGTGACT ACACTTCTATTATTCATGGAAAATACTCCCATGAAGAAACTGTTGCCACTGCTTCCTTTG CAGGGACATACATCATTGTTAAGAACATAGCAGAGGCTAGCTATGTATGTGATTATATAC TTGGTGGCCAACTTGATGGTTCTAGCTCCACAAAAGAGGAGTTCCTTGAGAAATTCAAAA ATGCTGTTTCTCCAGGATTTGATCCTGATGTTGACTTAGTGAAAGTTGGCATTGCCAATC AAACAACAATGCTTAAAGGAGAAACTGAAGAAATTGGGAAGCTTGTTGAGAAGACAATGA TGCGTAGGTTTGGAGTTGAGAATGTCAATGACCACTTCATTGCCTTCAACACTATCTGTG ATGCCACACAGGAAAGACAAGATGCAATGTACCAGCTAGTGAAGGAGAAAGTTGATCTTA TTCTGGTTGTTGGAGGATGGAACTCCAGTAACACCTCTCATTTGCAAGAAATTGGAGAAC TCAGTGGAATTCCGTCTTACTGGATTGACAGTGAACAAAGGATTGGACCTGGAAACAAGA TCAGCTACAAGTTAAATCATGGCGAGCTTGTCGAGAAAGAGAACTGGTTACCAGAAGGCC CTATCACAATCGGAGTTACTTCTGGCGCCTCAACTCCGGACAAGGTTGTTGAGGATGCGT TACAGAAGGTGTTTGAGATCAAGCGCCAGGAAGTTTTGCAGGCCGCGTAAATTTTCATCA GGTTTGGTCACGGTAGCTGATGGCTTGGTGAAGGTTAATAGAACCAGTGCACAAGCGATG TCTGTACAGTAGTGAAGAATGCTACGCTTTTAGGAGCGCATACTACGGCATGTGCTGAGA TTTACGTAGTATGTTGGGGGCAAATGTTGTAATCAATTATCACACGAAGAACAGTTGCTG TATCGGCTGTCATAACTTTCTGACCCCCTCAAATAACGTTGCAGAAGTATCTTTCTTCGG TATAAATATCACCCAATTTGTTAGCTAGTACTATTTGATAGAGCTCAAATGCAGGACTCC CTGTATATATATGGCAAGTACAAGAAATGCAGGGTTCCCTATGTATAACATTAAGTTCAG AACC