Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0729300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:29798706:29800489:-1 gene:Os03g0729300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin-like fold domain containing protein. (Os03t0729300-01)
Sequence

ATGGAGACGGTCGCCTCGCTCTCGCGCGCCGCGCTCGCCGGCGCGCCCGCCGCTACACGC
GCGACAGCGTCGCCCGTGAACAGGGCCGTGGTCCCTGCGGCGTCCCGGCCGCGCGGGGGA
CGCCTTTGCTGCCGACGCTCGCTGACGGCCGTCTCCGCGGCGGCAGGGGCTTCCCCTCCC
GTCTCCCCGTCGCCTAGCCCCGATGGCGGCTCCCCCGGCGTGTGGGACGCTCTCGGCGGC
GTGTCCGTGCTCGCCGCCGGCACCGGCGAAGCCGTTCAGCTCAGGGACCTGTGGGACCCC
ACCGAGGGGGTGGCCGTGGTGGCGCTGCTCCGGCACTTCGGGTGCTTCTGCTGCTGGGAG
CTGGCCTCTGTTCTGAAGGAATCCATGGCGAAATTCGACGCTGCCGGGGCCAAGCTGATC
GCCATCGGCGTCGGGACTCCTGACAAAGCTCGCATTCTCGCCGATGGGCTGCCGTTCCCT
GTTGATAGCTTGTACGCTGACCCCGAGCGCAAGGCTTACGACGTATTGGGGCTTTACCAT
GGTCTGGGTCGGACATTAATCAGTCCTGCGAAGATGTACTCGGGGCTTAATTCCATCAAG
AAGGTAACCAAGAACTACACGCTCAAGGGCACACCAGCAGACCTGACGGGTATCTTGCAG
CAGGGTGGTATGCTTGTGTTCAGAGGGAAAGAGTTGCTGTACTCATGGAAAGACAAAGGC
ACGGGTGATCATGCTCCTCTGGATGATGTCCTCAACGCTTGCTGCAATCGAACTTCTTGA

Peptide Sequence

PEP ID

Os03t0729300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:29798706:29800489:-1 gene:Os03g0729300 transcript:Os03t0729300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin-like fold domain containing protein. (Os03t0729300-01)
Sequence

METVASLSRAALAGAPAATRATASPVNRAVVPAASRPRGGRLCCRRSLTAVSAAAGASPP
VSPSPSPDGGSPGVWDALGGVSVLAAGTGEAVQLRDLWDPTEGVAVVALLRHFGCFCCWE
LASVLKESMAKFDAAGAKLIAIGVGTPDKARILADGLPFPVDSLYADPERKAYDVLGLYH
GLGRTLISPAKMYSGLNSIKKVTKNYTLKGTPADLTGILQQGGMLVFRGKELLYSWKDKG
TGDHAPLDDVLNACCNRTS

Transcript Sequence

Transcript ID

Os03t0729300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:29798706:29800489:-1 gene:Os03g0729300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin-like fold domain containing protein. (Os03t0729300-01)
Sequence

TACCTATGGAGACGGTCGCCTCGCTCTCGCGCGCCGCGCTCGCCGGCGCGCCCGCCGCTA
CACGCGCGACAGCGTCGCCCGTGAACAGGGCCGTGGTCCCTGCGGCGTCCCGGCCGCGCG
GGGGACGCCTTTGCTGCCGACGCTCGCTGACGGCCGTCTCCGCGGCGGCAGGGGCTTCCC
CTCCCGTCTCCCCGTCGCCTAGCCCCGATGGCGGCTCCCCCGGCGTGTGGGACGCTCTCG
GCGGCGTGTCCGTGCTCGCCGCCGGCACCGGCGAAGCCGTTCAGCTCAGGGACCTGTGGG
ACCCCACCGAGGGGGTGGCCGTGGTGGCGCTGCTCCGGCACTTCGGGTGCTTCTGCTGCT
GGGAGCTGGCCTCTGTTCTGAAGGAATCCATGGCGAAATTCGACGCTGCCGGGGCCAAGC
TGATCGCCATCGGCGTCGGGACTCCTGACAAAGCTCGCATTCTCGCCGATGGGCTGCCGT
TCCCTGTTGATAGCTTGTACGCTGACCCCGAGCGCAAGGCTTACGACGTATTGGGGCTTT
ACCATGGTCTGGGTCGGACATTAATCAGTCCTGCGAAGATGTACTCGGGGCTTAATTCCA
TCAAGAAGGTAACCAAGAACTACACGCTCAAGGGCACACCAGCAGACCTGACGGGTATCT
TGCAGCAGGGTGGTATGCTTGTGTTCAGAGGGAAAGAGTTGCTGTACTCATGGAAAGACA
AAGGCACGGGTGATCATGCTCCTCTGGATGATGTCCTCAACGCTTGCTGCAATCGAACTT
CTTGAGGTCTCTAGCAGTCGGAAGATGTGTATGTAAATATATGAAATGCTCAGCATGCCA
AACAGAGAGCAATTAGACTCAACAGTACTAGATGTTCGATTAATTATGCATTGTTGGTTT
GCTTATGTACTTAGCATGATATTGGATTAGCTACCCAATGGACATGACACTACAGTCTG