Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0728900-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:29774858:29778471:-1 gene:Os03g0728900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 084 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0728900-00)
Sequence	TCTCTCACAGGCACATTCTGTCAAAATATCCAACTGAGTGATGATCATAGCAGTGGTGCA AAGAGAAGGAAAGGAATAGATGATCACATTGCCTTGTTGAACCCATCAGCAAGTAGCAGG ATACAAAATGTTGGTGATCAACAGACAGAGGTTTCATCTCAGCAAGAGAGGATATCAATG GAGGAGGACAACCAAAAGAGTTGCTCCAAAATGCAAAGCAAGGAAGATTCTTCTGATGGT GATGGTACTAAAGAAGATTATGTTCATGTCCGGGCAAAGCGAGGCCAAGCCACTAATAGC CACAGCCTTGCAGAAAGACTGAGGAGAAAAAAGATAAGCGAGAGGATGAAGCTGCTTCAA GATCTTGTCCCAGGCTGCAGTAAGATCACTGGTAAGGCAGTCATGCTTGATGAGATAATC AATTATGTACAGTCACTACAACGTCAAGTTGAGTTTTTGTCGATGAAACTCGCAACTGTC AACCCTGAGCTTAGCTTTGATATTGAGCAGATTCTATCGAAACAAATGATGCTTTCACAA GATAGACATCTTGCTTTCTACGGAGTCGACCCAGGATCAAGTGCCCTCGTTGCTCATTTT AACCAAGGAATCATGCAGCCAGAAATGCTGTGTAATGTTTCCAATCCTGCAGATGTTTTG CAGGGGACAACAATTCAGGACATCTCCACAGTTAACCAGATACCTGCCATGTGGGAAGGA CTTCAGAACATTCCTCACTTGAACTACAACCCTGGTGGCGCAATGGCAGAGGGCAGCACC AACAATTCTGGTTCCATGAAGATTGAAAAATGA

Peptide Sequence

PEP ID	Os03t0728900-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:29774858:29778471:-1 gene:Os03g0728900 transcript:Os03t0728900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 084 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0728900-00)
Sequence	SLTGTFCQNIQLSDDHSSGAKRRKGIDDHIALLNPSASSRIQNVGDQQTEVSSQQERISM EEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQ DLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLSQ DRHLAFYGVDPGSSALVAHFNQGIMQPEMLCNVSNPADVLQGTTIQDISTVNQIPAMWEG LQNIPHLNYNPGGAMAEGSTNNSGSMKIEK

Transcript Sequence

Transcript ID	Os03t0728900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29774858:29778471:-1 gene:Os03g0728900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 084 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0728900-00)
Sequence	AGGGCAAGAAGGAATCATTTCACCTCAGTGGCAGGTAACAAACACCACATTAGCCTGCAG CTCTCTTCTTGCCCTTTTGCTCCCTCTTCTTGTCCATATAATCTTTCACCGCACCATTCA TTCTCCCCTGCGGTCAAATTGCGGCCAAGAAGACAACTGAGCTGTGTCCAAATGCGCACT AGCACTAGGTAAGATGCTGCGGAGAAAGATTAAAAAAAGAGAGAATTTTGAAAGGGAGGA GATCATCAAGCTGCTGTTTTTTTTTTTTCCTTTTTTGCGTTCTTGAATTGTTTCAGTATA CACATGTCTCCATTTGCAGGTGAAATTGGTGGTGGGCTCTTGCAGGGGTTCATGTGATCT CGCGGTCAGGGAACAGGGAAAGATAGGTGTTTCCTGAACAGTTGGAGATGTATTCAGGCC AGCAATCTGATCAGTGTCCTGGTCCAAATAGTGGCAAAGAATTCTTGGAGGTGAACTGGG ATTCTGTTGCACTGCATCAGAAGATGGGGTATAACAGTGGCGCATTTGGATTTCAAGCTT ACCCCATGTGACGATAATCTCTCACAGGCACATTCTGTCAAAATATCCAACTGAGTGATG ATCATAGCAGTGGTGCAAAGAGAAGGAAAGGAATAGATGATCACATTGCCTTGTTGAACC CATCAGCAAGTAGCAGGATACAAAATGTTGGTGATCAACAGACAGAGGTTTCATCTCAGC AAGAGAGGATATCAATGGAGGAGGACAACCAAAAGAGTTGCTCCAAAATGCAAAGCAAGG AAGATTCTTCTGATGGTGATGGTACTAAAGAAGATTATGTTCATGTCCGGGCAAAGCGAG GCCAAGCCACTAATAGCCACAGCCTTGCAGAAAGACTGAGGAGAAAAAAGATAAGCGAGA GGATGAAGCTGCTTCAAGATCTTGTCCCAGGCTGCAGTAAGATCACTGGTAAGGCAGTCA TGCTTGATGAGATAATCAATTATGTACAGTCACTACAACGTCAAGTTGAGTTTTTGTCGA TGAAACTCGCAACTGTCAACCCTGAGCTTAGCTTTGATATTGAGCAGATTCTATCGAAAC AAATGATGCTTTCACAAGATAGACATCTTGCTTTCTACGGAGTCGACCCAGGATCAAGTG CCCTCGTTGCTCATTTTAACCAAGGAATCATGCAGCCAGAAATGCTGTGTAATGTTTCCA ATCCTGCAGATGTTTTGCAGGGGACAACAATTCAGGACATCTCCACAGTTAACCAGATAC CTGCCATGTGGGAAGGACTTCAGAACATTCCTCACTTGAACTACAACCCTGGTGGCGCAA TGGCAGAGGGCAGCACCAACAATTCTGGTTCCATGAAGATTGAAAAATGAGCAGCTGGTA TAGCTTGCACGGTTGCTTGGTGAATCATAAAGCGCTCGCAGTATCAATTTTTGTATAGAT GGAGGCCCCCTAACCATTCGTTGCCGTTGCCTGTTTCCATATCTTGGCTCCCCATAGTGT ATGGTTTTCATGTGGCATCTGAAGATTTTGTACAGTTGGAGCTCAAAATAGCTGATTCCA CTGTAAATCGCTACTGTATTTTAGATTGTGGAAATTGGGAAACCTTGTATTGTTCATGAG CTCCAAGATTGGGACCAAGTATTGATGGGCTTAAGCATGCAAACGAGTAGGATGGACTTT TGGTA