Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0728800-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:29766132:29774052:1 gene:Os03g0728800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 16 description:Similar to RNA helicase (Fragment). (Os03t0728800-01);Similar to cDNA clone:J013129E17, full insert sequence. (Os03t0728800-02)
Sequence	ATGGCCGCCGCCGCCGCCGCCTCCTCCATGGCGAAGCGCAAGCAACGCAAGGCGGCGACG GAGCAGGAGGTAGAGAACCACGACGAGGCCACTGTCGCCGCGGAGGCGGGGCCCGAGAAT GACGGGCACACGGCGCACGCCGCCGAAGAGGCTGCGGCCGCTGAGGAGGGTGTCGAGCGC GAAGGAGGAGGCGAGGGCGGCGCGGAGGGGGAGGAGGGCCCGGACGCTGCAGCCAGGGGA GGTGAGGAGGGCAAGGAAGAGGAGGAGAGGGAGGTGAGCTTTGACGAGCTTGGCTTGGAC GAGCAACTGAAGAGGGCTTTGAGGAAGAAGGGCTTGGACAAGGCCACCCCGATCCAGAGA GAGGCCATCCCGCTCATCCTGGAAGGGAAGGATGTGGTCGCTAAGGCCAAGACTGGCTCC GGAAAGACCTTTGCTTACCTTCTCCCTATGCTGCATGAGCTATTGAAGTTGTCTGCAGAA GGGCGTATCCGAAAATCTGCTCCAAATGTTTTCATCCTTGTGCCAACTCGCGAGTTATGC CAGCAGGTTCATAATGAGGCATCATCTCTCCTTGAATTCTGTACATCCAAATTGAAGGTT GTGCAAGTGAATGCGAGCATGTCAGACAAAGATATTAAAGTTGCATTGTCTGGCCCCCCT AATATACTTGTTACAACTCCTGCTTGTGTTGCATCATGCATATCAAAGGGCATTATCCGT GGATCATCTATCAAAGAATCACTATCAATGATGATTCTAGACGAGGCTGACCTCCTCCTA TCCTATCGTTGTGAAGATGACATAAAAGCTCTCGTTCCACATATCCCAAGAAGCTGCCAG TCCATCCTGATGTCTGCAACGTCAAGCGCTGATATTGAGAAACTGACTAAGCTACTTCTG CACAACCCTTTTATTCTGACCCTTACGGAGGTTGGTCATGCGAAGGATGATTTGATCCCA AAAAATGTGCAGCAGTTTTGGATATCATGTGATGCTAAGGATAAGATGCTTTATATCCTT GTACTCCTGAAGTTGGAGCTTATTCAGAAGAAAGTTCTCATATTTGTAAACTCAATTGAC TCGGCATTCAAATTAAGGCTGTTTCTGGAGAAGTTTGGGATAAGATCTTCAGTGCTAAAT GCTGAATTACCACAAAATTCACGCCTCCATATCATTCAGGCATTCAATGCTAGGCTATTT GATTATCTGATAGCAACGGATGACAATAAGTCTAAAGAGGAGAGGCAAGCCAATAAGGGA AACAAAAAGGATTCTAGGGTGTCACGCAAGCAGTTGCAGCAAACTTTAGATGCTGAATTC GGTGTTGTCAGAGGAATTGACTTCAAAAATGTATTCACGGTAGTTAATTATGACATGCCT CCAGATCCTGCTGGGTATGTTCACAGAGTAGGAAGGACAGGGAGAGCAAATAAAACTGGT GCATCCATATCGCTTGTTTCACCAAAGGAGAATGGCATTTTTGAAGATATTGAAAATATG TTGAAAGATGTTGAAAATAGAGACACCAGTTGCATTTCACCTTTCCCATTACTTACAAAA AATGCCGTTGAGTCTTTACGCTATAGAGCTCAGGATGTTGCCAGGAGTGTGACAACCCGT GATATAAAAGAAGCACGTCGCCAAGACATAAAGAATGAAATCCTCAACTCTGAGAAGTTG AAGGCTCATTTTGATGAGAATCCGAGAGACCTTGATTTGCTCAAACATGATAAGTTATTG AGCAACAAGGAAATCCCTGCACACCTACGTGATGTCCCTGAGTACCTTATTGATCCCACA ACAAAAGAAGCAAGCAATGTAGTCAAACTTTCAAGGGCTGCTATGGATATCGATAAGCCA CGGAGGAGGAAAAGAATGGGATTCAAGGGAGGATCTGGCAGAAGTAGTGATCCCCTTAAG ACTTTCTCTGCTGAGGGGAAATCACGGAGGCGAGGGAGGAAGGAAAGAGACGGAGAACAG GATAGAAGAAAGAGGAAGAAGGTGGAAAGCTAA

Peptide Sequence

PEP ID	Os03t0728800-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:29766132:29774052:1 gene:Os03g0728800 transcript:Os03t0728800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 16 description:Similar to RNA helicase (Fragment). (Os03t0728800-01);Similar to cDNA clone:J013129E17, full insert sequence. (Os03t0728800-02)
Sequence	MAAAAAASSMAKRKQRKAATEQEVENHDEATVAAEAGPENDGHTAHAAEEAAAAEEGVER EGGGEGGAEGEEGPDAAARGGEEGKEEEEREVSFDELGLDEQLKRALRKKGLDKATPIQR EAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRKSAPNVFILVPTRELC QQVHNEASSLLEFCTSKLKVVQVNASMSDKDIKVALSGPPNILVTTPACVASCISKGIIR GSSIKESLSMMILDEADLLLSYRCEDDIKALVPHIPRSCQSILMSATSSADIEKLTKLLL HNPFILTLTEVGHAKDDLIPKNVQQFWISCDAKDKMLYILVLLKLELIQKKVLIFVNSID SAFKLRLFLEKFGIRSSVLNAELPQNSRLHIIQAFNARLFDYLIATDDNKSKEERQANKG NKKDSRVSRKQLQQTLDAEFGVVRGIDFKNVFTVVNYDMPPDPAGYVHRVGRTGRANKTG ASISLVSPKENGIFEDIENMLKDVENRDTSCISPFPLLTKNAVESLRYRAQDVARSVTTR DIKEARRQDIKNEILNSEKLKAHFDENPRDLDLLKHDKLLSNKEIPAHLRDVPEYLIDPT TKEASNVVKLSRAAMDIDKPRRRKRMGFKGGSGRSSDPLKTFSAEGKSRRRGRKERDGEQ DRRKRKKVES

Transcript Sequence

Transcript ID	Os03t0728800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29766132:29774052:1 gene:Os03g0728800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 16 description:Similar to RNA helicase (Fragment). (Os03t0728800-01);Similar to cDNA clone:J013129E17, full insert sequence. (Os03t0728800-02)
Sequence	TTCTCCCGCGGCTGCGCTTCCGGCTTAAACCCTAGCTCTATGGCCGCCGCCGCCGCCGCC TCCTCCATGGCGAAGCGCAAGCAACGCAAGGCGGCGACGGAGCAGGAGGTAGAGAACCAC GACGAGGCCACTGTCGCCGCGGAGGCGGGGCCCGAGAATGACGGGCACACGGCGCACGCC GCCGAAGAGGCTGCGGCCGCTGAGGAGGGTGTCGAGCGCGAAGGAGGAGGCGAGGGCGGC GCGGAGGGGGAGGAGGGCCCGGACGCTGCAGCCAGGGGAGGTGAGGAGGGCAAGGAAGAG GAGGAGAGGGAGGTGAGCTTTGACGAGCTTGGCTTGGACGAGCAACTGAAGAGGGCTTTG AGGAAGAAGGGCTTGGACAAGGCCACCCCGATCCAGAGAGAGGCCATCCCGCTCATCCTG GAAGGGAAGGATGTGGTCGCTAAGGCCAAGACTGGCTCCGGAAAGACCTTTGCTTACCTT CTCCCTATGCTGCATGAGCTATTGAAGTTGTCTGCAGAAGGGCGTATCCGAAAATCTGCT CCAAATGTTTTCATCCTTGTGCCAACTCGCGAGTTATGCCAGCAGGTTCATAATGAGGCA TCATCTCTCCTTGAATTCTGTACATCCAAATTGAAGGTTGTGCAAGTGAATGCGAGCATG TCAGACAAAGATATTAAAGTTGCATTGTCTGGCCCCCCTAATATACTTGTTACAACTCCT GCTTGTGTTGCATCATGCATATCAAAGGGCATTATCCGTGGATCATCTATCAAAGAATCA CTATCAATGATGATTCTAGACGAGGCTGACCTCCTCCTATCCTATCGTTGTGAAGATGAC ATAAAAGCTCTCGTTCCACATATCCCAAGAAGCTGCCAGTCCATCCTGATGTCTGCAACG TCAAGCGCTGATATTGAGAAACTGACTAAGCTACTTCTGCACAACCCTTTTATTCTGACC CTTACGGAGGTTGGTCATGCGAAGGATGATTTGATCCCAAAAAATGTGCAGCAGTTTTGG ATATCATGTGATGCTAAGGATAAGATGCTTTATATCCTTGTACTCCTGAAGTTGGAGCTT ATTCAGAAGAAAGTTCTCATATTTGTAAACTCAATTGACTCGGCATTCAAATTAAGGCTG TTTCTGGAGAAGTTTGGGATAAGATCTTCAGTGCTAAATGCTGAATTACCACAAAATTCA CGCCTCCATATCATTCAGGCATTCAATGCTAGGCTATTTGATTATCTGATAGCAACGGAT GACAATAAGTCTAAAGAGGAGAGGCAAGCCAATAAGGGAAACAAAAAGGATTCTAGGGTG TCACGCAAGCAGTTGCAGCAAACTTTAGATGCTGAATTCGGTGTTGTCAGAGGAATTGAC TTCAAAAATGTATTCACGGTAGTTAATTATGACATGCCTCCAGATCCTGCTGGGTATGTT CACAGAGTAGGAAGGACAGGGAGAGCAAATAAAACTGGTGCATCCATATCGCTTGTTTCA CCAAAGGAGAATGGCATTTTTGAAGATATTGAAAATATGTTGAAAGATGTTGAAAATAGA GACACCAGTTGCATTTCACCTTTCCCATTACTTACAAAAAATGCCGTTGAGTCTTTACGC TATAGAGCTCAGGATGTTGCCAGGAGTGTGACAACCCGTGATATAAAAGAAGCACGTCGC CAAGACATAAAGAATGAAATCCTCAACTCTGAGAAGTTGAAGGCTCATTTTGATGAGAAT CCGAGAGACCTTGATTTGCTCAAACATGATAAGTTATTGAGCAACAAGGAAATCCCTGCA CACCTACGTGATGTCCCTGAGTACCTTATTGATCCCACAACAAAAGAAGCAAGCAATGTA GTCAAACTTTCAAGGGCTGCTATGGATATCGATAAGCCACGGAGGAGGAAAAGAATGGGA TTCAAGGGAGGATCTGGCAGAAGTAGTGATCCCCTTAAGACTTTCTCTGCTGAGGGGAAA TCACGGAGGCGAGGGAGGAAGGAAAGAGACGGAGAACAGGATAGAAGAAAGAGGAAGAAG GTGGAAAGCTAATCTTTTGTGAAGCGTTCACTGCCAAGTGCGCACAGTTTTGTAGGTTTC TGGTATCTCGTCCTGTAACTTTGTAGCATCTCCAGATATAGGGGGATAACAATGTCAAGC TTTACTGAATGCTGCGTGTGCTATGCTATGCACACCATTATATAGACAGACGAGTAGAGA GTTTGTTT