Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0728200-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:29730260:29732149:1 gene:Os03g0728200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0728200-00)
Sequence	ATGAACCAAAAAGAAAAGAAAAATGAACCGGGCAAGCATTCTGGGCTTGCGCAGTTGCGC CACACTGCCACAGTCCAGCCCACCATGCGGCGCCTCCTCTCCGCTCCGCTGCGCCGCCGC CTATGCACGGCGGCCGTGGCCGCGGCGGCGCCCGACCCGGCCCTCGCCTCCTCCGCGGAG CTCGCGTACCGCCTCCTCCGCCGCCACCACTCCGACCCCAAGAGGCTCACCGCCGCGCTC TCCGGCTCGGGCCTCGACCCGACCTCGCCGCGCCTCCTCGACGCCGTCCTCCGCCGCTGC GGCGCCGCCTCCGCGCTCGCGCTCCACTTCTTCCACTGGTGCTCCCCGTCGCTGCCGCCG CCGGGGCCGCTCCCTTCCTCCCTCGCGCTCCTCGCCAAGTCCTTCTCCCGCGCCTCCTCC GCGCCGTCCCCTTCCCTCCTCGCGCCGCTCCCCGCCCAGCTCCTCTCCCCGTCCCTCCTC TCCCCCGTCCTCCGCCGCCTCCCGCCCCCGCGCCTCCTCCCCTTCGCGCTCTCACTCCTC TCCGCGCGCCCCAACCACGACCACCCCTCGCTCTTCCTCTCCCTCCTCGAGTCCCTCGCC AAGACCGGCCATGTCGCCGTCGCCGAGCAGCTCGTCGAGGAGCTCCAGCCCAGGCTCCCG CTCTCGCTCCGCCACTACACCGCGCTGCTCTACGGGTGGTGCCGCATGGGCAAGCTCGAC GAGGCCAAGCACGTGCTCGCCCGCATGAAGGCCGCGGAGGTCGCCCCGGACGTCGTCGTC TTCAACACCCTCCTCGCCGGCTTCGTCGCCGACGGGCGGTTCGAGGACGCGTTCGAGCTG GCCCGGGAGATGGAGCGGCGTGGCTGCCCGCCGAACGCCGTGTCGTACACCACCCTGATG CAGGGGCTTGGCGCCAGGGGGAGGGTTGATGAGGCAATGCGGGTGTTTGTGGAAATGCGC AGGAAGGGGTGTGCACCGGATTCCGTCACCTATGGCACTCTGGTTACTGCGTTCTGCAAG GCTGGTAGGATATCACAGGGATATGAGTTCTTGGACGTCATGGCAAGGGAGGGTCTGCGG GTGGACGCCGGCGTGTACCTCGGGTTCTTCGTCGCGCACGAGAAGAAGGAGCAGCTTGAG GAGTGCTTGGAGTTGATGGAGAGGATGAGGGAGTGCAGGTGCCCGCCAGACCTCAGCATC TACAATGTGGTGATCAGGTTGGCCTGCAAACTCGGGGAGACGAAGCAGGCTGTGGCATTG TGGAACGAGATGGAGACCAACGAGCTTAGTCCCGGGGTTGACACATTTGCTATCATGGTG ACTGGCCTCGTTGGCCAAGGCGTGCTGGTTGAGGCCTGCGGTTATTTCAAGGACATGGTT GGGAGGGGACTCTTTGTTGCACCCCAGTATGGGGTGCTGAAGGACCTCCTCAATTCATTG GTCAGAGATCAGAAACTTGAGCTTGCAAAGGATGTTTGGGGATGCATTATGACCAAAGGC TGTGAGCTCAATTTTGGCGCATGGACAATCTGGATTCATGCACTGTACGCAAAGAAACAC GTCAAGGAGGCCTGCATGTATTGCTTGGACATGCTTGACGCTGGTCTGATGCCGCAGCCC GACACATTTGCAAAGCTGATGAAGGGACTGAAGAAGCTCTACAACAGGCAGATTGCTGCT GAGATCACTGAGAAGGTGAGGAAGATGGCGGAGGAGAGACATGTTAGCTTCAAGATGTAT AAGAGGCGTGGGGTGAGGGATCTTGAAGAGAAGCCTAAGGCAAAGAGAAAGAAAGGGCAG AAAAGGAGTCGCTTGAGGCAGGCTGGTCAGAATCAATCCAATAGGCATGCTGACAAAACT GACCTTTTTGATGATTTTGATGATGAATAA

Peptide Sequence

PEP ID	Os03t0728200-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:29730260:29732149:1 gene:Os03g0728200 transcript:Os03t0728200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0728200-00)
Sequence	MNQKEKKNEPGKHSGLAQLRHTATVQPTMRRLLSAPLRRRLCTAAVAAAAPDPALASSAE LAYRLLRRHHSDPKRLTAALSGSGLDPTSPRLLDAVLRRCGAASALALHFFHWCSPSLPP PGPLPSSLALLAKSFSRASSAPSPSLLAPLPAQLLSPSLLSPVLRRLPPPRLLPFALSLL SARPNHDHPSLFLSLLESLAKTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLD EAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLM QGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLR VDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVAL WNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSL VRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALYAKKHVKEACMYCLDMLDAGLMPQP DTFAKLMKGLKKLYNRQIAAEITEKVRKMAEERHVSFKMYKRRGVRDLEEKPKAKRKKGQ KRSRLRQAGQNQSNRHADKTDLFDDFDDE

Transcript Sequence

Transcript ID	Os03t0728200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29730260:29732149:1 gene:Os03g0728200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0728200-00)
Sequence	ATGAACCAAAAAGAAAAGAAAAATGAACCGGGCAAGCATTCTGGGCTTGCGCAGTTGCGC CACACTGCCACAGTCCAGCCCACCATGCGGCGCCTCCTCTCCGCTCCGCTGCGCCGCCGC CTATGCACGGCGGCCGTGGCCGCGGCGGCGCCCGACCCGGCCCTCGCCTCCTCCGCGGAG CTCGCGTACCGCCTCCTCCGCCGCCACCACTCCGACCCCAAGAGGCTCACCGCCGCGCTC TCCGGCTCGGGCCTCGACCCGACCTCGCCGCGCCTCCTCGACGCCGTCCTCCGCCGCTGC GGCGCCGCCTCCGCGCTCGCGCTCCACTTCTTCCACTGGTGCTCCCCGTCGCTGCCGCCG CCGGGGCCGCTCCCTTCCTCCCTCGCGCTCCTCGCCAAGTCCTTCTCCCGCGCCTCCTCC GCGCCGTCCCCTTCCCTCCTCGCGCCGCTCCCCGCCCAGCTCCTCTCCCCGTCCCTCCTC TCCCCCGTCCTCCGCCGCCTCCCGCCCCCGCGCCTCCTCCCCTTCGCGCTCTCACTCCTC TCCGCGCGCCCCAACCACGACCACCCCTCGCTCTTCCTCTCCCTCCTCGAGTCCCTCGCC AAGACCGGCCATGTCGCCGTCGCCGAGCAGCTCGTCGAGGAGCTCCAGCCCAGGCTCCCG CTCTCGCTCCGCCACTACACCGCGCTGCTCTACGGGTGGTGCCGCATGGGCAAGCTCGAC GAGGCCAAGCACGTGCTCGCCCGCATGAAGGCCGCGGAGGTCGCCCCGGACGTCGTCGTC TTCAACACCCTCCTCGCCGGCTTCGTCGCCGACGGGCGGTTCGAGGACGCGTTCGAGCTG GCCCGGGAGATGGAGCGGCGTGGCTGCCCGCCGAACGCCGTGTCGTACACCACCCTGATG CAGGGGCTTGGCGCCAGGGGGAGGGTTGATGAGGCAATGCGGGTGTTTGTGGAAATGCGC AGGAAGGGGTGTGCACCGGATTCCGTCACCTATGGCACTCTGGTTACTGCGTTCTGCAAG GCTGGTAGGATATCACAGGGATATGAGTTCTTGGACGTCATGGCAAGGGAGGGTCTGCGG GTGGACGCCGGCGTGTACCTCGGGTTCTTCGTCGCGCACGAGAAGAAGGAGCAGCTTGAG GAGTGCTTGGAGTTGATGGAGAGGATGAGGGAGTGCAGGTGCCCGCCAGACCTCAGCATC TACAATGTGGTGATCAGGTTGGCCTGCAAACTCGGGGAGACGAAGCAGGCTGTGGCATTG TGGAACGAGATGGAGACCAACGAGCTTAGTCCCGGGGTTGACACATTTGCTATCATGGTG ACTGGCCTCGTTGGCCAAGGCGTGCTGGTTGAGGCCTGCGGTTATTTCAAGGACATGGTT GGGAGGGGACTCTTTGTTGCACCCCAGTATGGGGTGCTGAAGGACCTCCTCAATTCATTG GTCAGAGATCAGAAACTTGAGCTTGCAAAGGATGTTTGGGGATGCATTATGACCAAAGGC TGTGAGCTCAATTTTGGCGCATGGACAATCTGGATTCATGCACTGTACGCAAAGAAACAC GTCAAGGAGGCCTGCATGTATTGCTTGGACATGCTTGACGCTGGTCTGATGCCGCAGCCC GACACATTTGCAAAGCTGATGAAGGGACTGAAGAAGCTCTACAACAGGCAGATTGCTGCT GAGATCACTGAGAAGGTGAGGAAGATGGCGGAGGAGAGACATGTTAGCTTCAAGATGTAT AAGAGGCGTGGGGTGAGGGATCTTGAAGAGAAGCCTAAGGCAAAGAGAAAGAAAGGGCAG AAAAGGAGTCGCTTGAGGCAGGCTGGTCAGAATCAATCCAATAGGCATGCTGACAAAACT GACCTTTTTGATGATTTTGATGATGAATAA