Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0727600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:29660662:29662922:-1 gene:Os03g0727600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 1 description:ACC synthase, Ethylene biosynthesis (Os03t0727600-01)
Sequence

ATGGTGAGCCAAGTGGTCGCCGAGGAGAAGCCGCAGCTGCTGTCCAAGAAGGCCGGGTGC
AACAGCCACGGCCAGGACTCGTCCTACTTCCTGGGGTGGCAGGAGTACGAGAAAAACCCG
TTCGACCCCGTCTCCAACCCTTCCGGCATCATCCAGATGGGCCTCGCCGAGAACCAGCTG
TCGTTCGACCTGCTTGAGGAGTGGCTGGAGAAGAACCCCCACGCGCTCGGCCTCCGGCGA
GAGGGCGGCGGCGCCTCCGTCTTCCGCGAGCTCGCGCTGTTCCAGGACTACCACGGCCTC
CCGGCTTTCAAAAATGCATTGGCGCGGTTCATGTCGGAGCAGAGAGGGTACAAGGTGGTG
TTCGACCCCAGCAACATCGTGCTCACCGCCGGCGCCACCTCGGCTAACGAGGCGCTCATG
TTCTGCCTCGCCGACCACGGCGACGCCTTCCTCATCCCCACCCCATACTACCCAGGGTTC
GACCGCGACCTCAAGTGGCGCACCGGCGCGGAGATCGTACCCGTGCACTGCGCGAGCGCG
AACGGGTTCCGGGTGACGCGCCCCGCGCTGGACGACGCGTACCGCCGCGCGCAGAAGCGC
CGGCTGCGCGTCAAGGGGGTGCTGATCACCAACCCGTCCAACCCGCTCGGCACCGCGTCG
CCGCGCGCCGACCTCGAGACGATCGTCGACTTCGTCGCCGCCAAGGGCATCCACCTCATC
AGCGACGAGATCTACGCCGGCACGGCGTTCGCCGAGCCGCCCGCGGGCTTCGTCAGCGCG
CTCGAGGTCGTGGCCGGGCGCGACGGCGGCGGCGCTGACGTGTCCGACCGCGTGCACGTC
GTGTACAGCCTGTCCAAGGACCTCGGCCTCCCGGGGTTCCGCGTCGGCGCCATCTACTCC
GCCAACGCCGCCGTCGTGTCCGCGGCGACCAAGATGTCCAGCTTCGGCCTCGTGTCGTCC
CAGACGCAGTACCTCCTCGCGGCGCTGCTCGGCGACAGGGACTTCACCCGGAGCTACGTC
GCGGAGAACAAGCGGCGGATCAAGGAGCGGCACGACCAGCTCGTGGACGGGCTCAGGGAG
ATCGGCATTGGGTGCCTGCCCAGCAACGCCGGCCTCTTCTGCTGGGTGGACATGAGCCAC
CTGATGCGGAGCCGGTCGTTCGCCGGCGAGATGGAGCTCTGGAAGAAGGTGGTGTTCGAG
GTCGGCCTCAACATCTCCCCCGGGTCGTCGTGCCACTGCCGCGAGCCCGGCTGGTTCCGC
GTCTGCTTCGCCAACATGTCGGCCAAGACCCTCGACGTCGCCATGCAGCGCCTCAGGTCG
TTCGTCGACTCCGCCACCGGCGGCGGCGACAACGCCGCCCTCCGCCGCGCCGCCGTCCCC
GTCAGGAGCGTCAGCTGCCCGCTCGCCATCAAGTGGGCGCTCCGCCTCACCCCGTCCATC
GCCGACCGGAAGGCCGAGAGATAA

Peptide Sequence

PEP ID

Os03t0727600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:29660662:29662922:-1 gene:Os03g0727600 transcript:Os03t0727600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 1 description:ACC synthase, Ethylene biosynthesis (Os03t0727600-01)
Sequence

MVSQVVAEEKPQLLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQL
SFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVV
FDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASA
NGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLI
SDEIYAGTAFAEPPAGFVSALEVVAGRDGGGADVSDRVHVVYSLSKDLGLPGFRVGAIYS
ANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLRE
IGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFR
VCFANMSAKTLDVAMQRLRSFVDSATGGGDNAALRRAAVPVRSVSCPLAIKWALRLTPSI
ADRKAER

Transcript Sequence

Transcript ID

Os03t0727600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:29660662:29662922:-1 gene:Os03g0727600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC SYNTHASE 1 description:ACC synthase, Ethylene biosynthesis (Os03t0727600-01)
Sequence

GCAGCAGCCAGCTAGCTAGCTACTCCTACTCAGCAGCAGCAGCAGCTCAGGTCTCTCCAG
TGTTCTTCGAGCTATACACTAGCTCTCACAGATTTTTGCTCCGACTCATCAAGCGGATTG
ATTCGATCGGCTGTTAGAGAGAGAAAAAAGGAGAGTTGGAGATGGTGAGCCAAGTGGTCG
CCGAGGAGAAGCCGCAGCTGCTGTCCAAGAAGGCCGGGTGCAACAGCCACGGCCAGGACT
CGTCCTACTTCCTGGGGTGGCAGGAGTACGAGAAAAACCCGTTCGACCCCGTCTCCAACC
CTTCCGGCATCATCCAGATGGGCCTCGCCGAGAACCAGCTGTCGTTCGACCTGCTTGAGG
AGTGGCTGGAGAAGAACCCCCACGCGCTCGGCCTCCGGCGAGAGGGCGGCGGCGCCTCCG
TCTTCCGCGAGCTCGCGCTGTTCCAGGACTACCACGGCCTCCCGGCTTTCAAAAATGCAT
TGGCGCGGTTCATGTCGGAGCAGAGAGGGTACAAGGTGGTGTTCGACCCCAGCAACATCG
TGCTCACCGCCGGCGCCACCTCGGCTAACGAGGCGCTCATGTTCTGCCTCGCCGACCACG
GCGACGCCTTCCTCATCCCCACCCCATACTACCCAGGGTTCGACCGCGACCTCAAGTGGC
GCACCGGCGCGGAGATCGTACCCGTGCACTGCGCGAGCGCGAACGGGTTCCGGGTGACGC
GCCCCGCGCTGGACGACGCGTACCGCCGCGCGCAGAAGCGCCGGCTGCGCGTCAAGGGGG
TGCTGATCACCAACCCGTCCAACCCGCTCGGCACCGCGTCGCCGCGCGCCGACCTCGAGA
CGATCGTCGACTTCGTCGCCGCCAAGGGCATCCACCTCATCAGCGACGAGATCTACGCCG
GCACGGCGTTCGCCGAGCCGCCCGCGGGCTTCGTCAGCGCGCTCGAGGTCGTGGCCGGGC
GCGACGGCGGCGGCGCTGACGTGTCCGACCGCGTGCACGTCGTGTACAGCCTGTCCAAGG
ACCTCGGCCTCCCGGGGTTCCGCGTCGGCGCCATCTACTCCGCCAACGCCGCCGTCGTGT
CCGCGGCGACCAAGATGTCCAGCTTCGGCCTCGTGTCGTCCCAGACGCAGTACCTCCTCG
CGGCGCTGCTCGGCGACAGGGACTTCACCCGGAGCTACGTCGCGGAGAACAAGCGGCGGA
TCAAGGAGCGGCACGACCAGCTCGTGGACGGGCTCAGGGAGATCGGCATTGGGTGCCTGC
CCAGCAACGCCGGCCTCTTCTGCTGGGTGGACATGAGCCACCTGATGCGGAGCCGGTCGT
TCGCCGGCGAGATGGAGCTCTGGAAGAAGGTGGTGTTCGAGGTCGGCCTCAACATCTCCC
CCGGGTCGTCGTGCCACTGCCGCGAGCCCGGCTGGTTCCGCGTCTGCTTCGCCAACATGT
CGGCCAAGACCCTCGACGTCGCCATGCAGCGCCTCAGGTCGTTCGTCGACTCCGCCACCG
GCGGCGGCGACAACGCCGCCCTCCGCCGCGCCGCCGTCCCCGTCAGGAGCGTCAGCTGCC
CGCTCGCCATCAAGTGGGCGCTCCGCCTCACCCCGTCCATCGCCGACCGGAAGGCCGAGA
GATAATCGCCAAGAACAAAACCACACCATGTCCATTACTATTACCAGTAGTAGCACATAC
TAGTACATTACTACGTCACAGTACACTATACTAGTAGCAGCAGTAGCAGATTCCTTTCGT
TTCTTGTAATCTTTTGGCGCCATTTTTTTTTCCTCGGATCGAGGCGTGCATGCCCGATGG
TCTCGGATGATCACATATCGATCCATTCCATCAGCCGGCATCGGATCGATCCCGTATTTT
TCACTGGGAATTTTCAGTTTTCCCCCGACACTGAATTTCTCCCAGTTGTTGTAACCTATG
GAAAGTATTATTGCTCGTCAATAAAAGCTAGTGCCCACCACTTGTAGTTC