Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0727000-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:29596367:29606861:-1 gene:Os03g0727000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX 1 description:Similar to Homeobox protein. (Os03t0727000-01);Knotted1-like homeobox protein, Shoot apical meristem maintenance, Embryogenesis (Os03t0727000-02)
Sequence	ATGGAGGAGATCTCCCACCACTTCGGGGTCGTCGGAGCCAGCGGCGTCCATGGCGGCCAC CAGCATCAGCATCACCACCACCCGTGGGGTTCTTCCCTGAGCGCCATCGTCGCGCCGCCG CCGCCGCCGCAGCTGCAGCAGCAGCAGACGCAGGCCGGCGGCATGGCGCACACGCCGCTC ACGCTGAACACGGCGGCGGCGGCGGTCGGCAACCCGGTGCTGCAGCTGGCGAACGGCAGC CTGCTCGACGCGTGCGGCAAGGCGAAGGAGGCGTCGGCGTCGGCGTCGTACGCCGCCGAC GTGGAGGCCATCAAGGCCAAGATCATCTCCCACCCCCACTACTCCTCCCTCCTCGCCGCC TACCTCGACTGCCAGAAGGTTGGGGCGCCGCCGGAGGTGGCGGCGAGGCTGACGGCGGTG GCGCAGGACCTGGAGCTTCGCCAGCGCACGGCGCTCGGCGTCCTCGGCGCCGCCACGGAG CCGGAGCTGGACCAGTTCATGGAGGCGTACCACGAGATGCTGGTGAAGTACAGGGAGGAG CTGACGAGGCCGCTGCAGGAGGCCATGGAGTTCTTGAGGAGGGTGGAGACGCAGCTCAAC ACGCTCTCCATCTCCGGCAGATCGCTTCGCAATATCCTTTCCTCCGGCTCTTCTGAGGAG GACCAAGAAGGTAGCGGAGGAGAGACAGAGCTACCTGAGATTGATGCACATGGTGTGGAT CAGGAGCTCAAGCACCATTTGCTGAAGAAGTACAGTGGATACCTGAGCTCCCTGAAGCAA GAACTGTCAAAGAAGAAGAAAAAAGGGAAGCTCCCCAAGGATGCTCGTCAACAGCTCCTC AACTGGTGGGAGCTGCACTACAAATGGCCTTACCCCTCGGAGAGTCAGAAGGTGGCACTG GCGGAGTCGACGGGGCTGGACCTGAAGCAGATCAACAACTGGTTCATCAACCAGAGGAAG CGGCACTGGAAGCCCTCCGACGAGATGCAGTTCGTGATGATGGACGGCTACCACCCGACC AACGCCGCCGCCTTCTACATGGACGGCCACTTCATCAACGACGGCGGCCTCTACAGGCTC GGCTAG

Peptide Sequence

PEP ID	Os03t0727000-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:29596367:29606861:-1 gene:Os03g0727000 transcript:Os03t0727000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX 1 description:Similar to Homeobox protein. (Os03t0727000-01);Knotted1-like homeobox protein, Shoot apical meristem maintenance, Embryogenesis (Os03t0727000-02)
Sequence	MEEISHHFGVVGASGVHGGHQHQHHHHPWGSSLSAIVAPPPPPQLQQQQTQAGGMAHTPL TLNTAAAAVGNPVLQLANGSLLDACGKAKEASASASYAADVEAIKAKIISHPHYSSLLAA YLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREE LTRPLQEAMEFLRRVETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVD QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVAL AESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAAFYMDGHFINDGGLYRL G

Transcript Sequence

Transcript ID	Os03t0727000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29596367:29606861:-1 gene:Os03g0727000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX 1 description:Similar to Homeobox protein. (Os03t0727000-01);Knotted1-like homeobox protein, Shoot apical meristem maintenance, Embryogenesis (Os03t0727000-02)
Sequence	GCATGCTCGCGAAAAACGAGGAGGGGAGTTAGGAACCTTGACATACAACCAATGATACCA TTTTTTTTCAAGCAGCTAGAGGTACAGAGGTTCATATTTTTTAGATGGCTCATTAGTGAT ATTTTAGTCAAAAATTTCAGAAGTACGGCCACGGGTGATGGCCTGAACTAATATTTTATT CGAGGTGCCGCTACATCATCGTCTAAAGTACACGCAAGATTCAACGGAAAAAAGAAACCG ATCGATCGAGATCAGTTAGTTAATGAAATAACTAGATCAACTCATGTCGTCAAAAACAAA AGATGCTCATCTATGGACAACACACGCTGATGATTCGATCATCAAACAAAGGTGGTAGTA GTAGTAAAGCGTATCGTGTTTCTCATCAGAAAGAAGAATTAAAGAAAAAACTAATCCCCT CTCGCGAGCCAGAGAAAATTCCCTACAAAAGCCACTCCTTTGATTTGACATGCAAAAGCA AGGCTCCACTCCTCTACTACCCTACAACTACACAACACTGTCTCTCTATCTCCAAAGGCA GTAGCTGTATTGGCTTCCAGCTTTTCCTCTCTACCTCTAATGATAGCTTGGAGCAAGTTC AATAGTATAGCTAACTACTAGCTCTAATTCATCTATAATCAATCTAATAGCTTATTCATA CAATAGTTATATACTACATTATTAATATCTGGTCCCATCTATCATACACACTGAGTCTGT GCTATAGCTGACTACAAATCTGTAGCCCGCTGCTCTTCTCTCTTCATTTATCTTCTTAAA ATATATTTGCAGCTGGCTTATGGCTTATAGCTTGATATTGAGAGGGAGAGGAGTGAGAGC TAGCTCAGCTCAGCTCAAGGTAAACAACAAGGCACACTCTTCCTACCTCTTCTCCGGTTC TTCCTTTTTCCTCTTTCTCTTCGTCCAAGAACTTCACCTCAATAGCTCGAGCTACGGCCT AACTTTTGCGTTGCGCAGGAGAGCTCGATCGCTGCACCAATACTTCACTGGAGATCGCCT AGCTGCAGCTAGCTAGCTTATCCTGCGTGTCTTGAGCTTCTCTCATGGAGGAGATCTCCC ACCACTTCGGGGTCGTCGGAGCCAGCGGCGTCCATGGCGGCCACCAGCATCAGCATCACC ACCACCCGTGGGGTTCTTCCCTGAGCGCCATCGTCGCGCCGCCGCCGCCGCCGCAGCTGC AGCAGCAGCAGACGCAGGCCGGCGGCATGGCGCACACGCCGCTCACGCTGAACACGGCGG CGGCGGCGGTCGGCAACCCGGTGCTGCAGCTGGCGAACGGCAGCCTGCTCGACGCGTGCG GCAAGGCGAAGGAGGCGTCGGCGTCGGCGTCGTACGCCGCCGACGTGGAGGCCATCAAGG CCAAGATCATCTCCCACCCCCACTACTCCTCCCTCCTCGCCGCCTACCTCGACTGCCAGA AGGTTGGGGCGCCGCCGGAGGTGGCGGCGAGGCTGACGGCGGTGGCGCAGGACCTGGAGC TTCGCCAGCGCACGGCGCTCGGCGTCCTCGGCGCCGCCACGGAGCCGGAGCTGGACCAGT TCATGGAGGCGTACCACGAGATGCTGGTGAAGTACAGGGAGGAGCTGACGAGGCCGCTGC AGGAGGCCATGGAGTTCTTGAGGAGGGTGGAGACGCAGCTCAACACGCTCTCCATCTCCG GCAGATCGCTTCGCAATATCCTTTCCTCCGGCTCTTCTGAGGAGGACCAAGAAGGTAGCG GAGGAGAGACAGAGCTACCTGAGATTGATGCACATGGTGTGGATCAGGAGCTCAAGCACC ATTTGCTGAAGAAGTACAGTGGATACCTGAGCTCCCTGAAGCAAGAACTGTCAAAGAAGA AGAAAAAAGGGAAGCTCCCCAAGGATGCTCGTCAACAGCTCCTCAACTGGTGGGAGCTGC ACTACAAATGGCCTTACCCCTCGGAGAGTCAGAAGGTGGCACTGGCGGAGTCGACGGGGC TGGACCTGAAGCAGATCAACAACTGGTTCATCAACCAGAGGAAGCGGCACTGGAAGCCCT CCGACGAGATGCAGTTCGTGATGATGGACGGCTACCACCCGACCAACGCCGCCGCCTTCT ACATGGACGGCCACTTCATCAACGACGGCGGCCTCTACAGGCTCGGCTAGCTAGCTAGCC TACTCCTTATCCCCAGCTACCATGACCTAGATCGATCTCGACCCCAAATCAATGGTCGCT AAGCTACTGAAAAGTTTGTGATGAGAATTGAAGAACCTAGGTTAGTCTTCCTGGTAATTT GATGCTCGCGCGTACGCACGCCATGGATGGCTGCGTGCTTATTTTGTTTCTTGCCGCAAT ATGTAATGCAATTGCCTTAGCTAATGCATCAACTCGGGTCGGTTTTAGCTGCTGCTGCTG CGCCACAATGAGGTGGTTGTGGTTATGCTTTTGTGTGGTTTAATACGCCAAGACGTACAC ATTGCTTCGAAATGTCGCTACTCTTGCTGCTGCTAATTAAGTGCGTGTTTGAAT