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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0725000-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:29462968:29465691:1 gene:Os03g0725000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mitochondrial ribosomal protein L6-1 description:Mitochondrial 60S ribosomal protein L6. (Os03t0725000-01);Mitochondrial 60S ribosomal protein L6. (Os03t0725000-02)
Sequence

ATGGAGGCCAAGGTTTTCAGGTTTCTGAAGCTTGTCGGAGTTGGCTTCAAAGCAAGGACA
GAGCGTGAAGGCCGTGAGTTGTTTCTGAAACTTGGTTACAGCCATGAGGTGCAGTTCACT
GCTCCACCTGCTGTTCGTGTCTTCTGCTTCAAACCCAACTTAATTTGCTGTACTGGTATC
GACAAGAATCGGGTGCACAACTTTGCGGGCGCTGTTCGGAACTGTAAGCCTCCAGAGGTA
TACAAAGGGAAAGGCATATTGTACATTGATGAAGTTATCAAGCTGAAGCCAGGGAAGAAG
CAAAAGAAGTAA

Peptide Sequence

PEP ID

Os03t0725000-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:29462968:29465691:1 gene:Os03g0725000 transcript:Os03t0725000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mitochondrial ribosomal protein L6-1 description:Mitochondrial 60S ribosomal protein L6. (Os03t0725000-01);Mitochondrial 60S ribosomal protein L6. (Os03t0725000-02)
Sequence

MEAKVFRFLKLVGVGFKARTEREGRELFLKLGYSHEVQFTAPPAVRVFCFKPNLICCTGI
DKNRVHNFAGAVRNCKPPEVYKGKGILYIDEVIKLKPGKKQKK

Transcript Sequence

Transcript ID

Os03t0725000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:29462968:29465691:1 gene:Os03g0725000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:mitochondrial ribosomal protein L6-1 description:Mitochondrial 60S ribosomal protein L6. (Os03t0725000-01);Mitochondrial 60S ribosomal protein L6. (Os03t0725000-02)
Sequence

GCGCGTAGGGGAAAGCGGCGGCGGCGGTGGCGACGCAGACGCGACTGGGAGTCGACGGCG
CGACAGCGACGCGGAGCTCTCCCCGGCGGCGGTGCTCTCTCCTCCGGCGACCGCCCCCTC
CGCTGGCCACCTTCTCACCGGTGACTAGGAAACAAGCTTTTCTCTGTTGGATATACCTCT
TCTCTTGTTGGAATGGAGGCCAAGGTTTTCAGGTTTCTGAAGCTTGTCGGAGTTGGCTTC
AAAGCAAGGACAGAGCGTGAAGGCCGTGAGTTGTTTCTGAAACTTGGTTACAGCCATGAG
GTGCAGTTCACTGCTCCACCTGCTGTTCGTGTCTTCTGCTTCAAACCCAACTTAATTTGC
TGTACTGGTATCGACAAGAATCGGGTGCACAACTTTGCGGGCGCTGTTCGGAACTGTAAG
CCTCCAGAGGTATACAAAGGGAAAGGCATATTGTACATTGATGAAGTTATCAAGCTGAAG
CCAGGGAAGAAGCAAAAGAAGTAATGTAGGGATGAGCCTCCATATTTTACTTTCAGTCTG
CTAAGATGCTGTAGCACATTTTTAGTGGCGCATATGTTCTTGTGGTTTTCTTGTTCTGGT
CTGCTGGATCATCTTTGCCACAGTGCCATGCTGGAACTGGAAGACCCAATAATTCTCTTA
TGCAGTGTATGTGAAATTGTGAATCATATGTTGAGCCTGTATGACATACAGACCAGAGGG
ACAAATCACCTTCCAAATTTTTTTTGGACTGGCAACGTGTAAAACTTTCGATGGGTTTGC
TGTTCTTTCCACTGTTCTGCTCTGCTATCCTAGACATTGAGCTCAGTGTAAAACTGGATC
TGTGCATTCCAGGAGTAATGTTTTTTTGTACTGAGCTAAAATCTGCAGTTTTATATGCAT
C