Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0723000-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:29370897:29372880:1 gene:Os03g0723000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW-LIKE7, SCARECROW-LIKE 7 description:GRAS transcription factor domain containing protein. (Os03t0723000-01);GRAS transcription factor domain containing protein. (Os03t0723000-02)
Sequence

ATGGCGTACATGTGCGCGGACAGCGGCAACCTCATGGCCATCGCGCAGCAGGTGATCCAG
CAGCAGCAGCAGCAGCAACAGCAGCAGCAGAGGCACCACCACCACCACCATCTGCCGCCG
CCGCCGCCGCCGCAGTCGATGGCGCCGCACCACCACCAGCAGAAGCACCACCACCACCAC
CAGCAGATGCCGGCGATGCCGCAGGCGCCGCCCTCGTCGCACGGCCAGATCCCGGGCCAG
CTCGCGTACGGTGGCGGCGCGGCGTGGCCCGCCGGGGAGCACTTCTTCGCGGACGCGTTC
GGGGCGTCCGCCGGCGACGCGGTGTTCTCCGACCTCGCGGCGGCCGCGGACTTCGACTCT
GATGGGTGGATGGAGAGCCTTATTGGGGACGCCCCCTTCCAGGACTCCGACCTGGAACGC
CTCATCTTCACCACCCCGCCGCCGCCCGTGCCGTCCCCACCCCCCACGCATGCCGCCGCC
ACCGCCACCGCCACCGCCGCCACCGCCGCTCCTCGACCTGAGGCTGCACCGGCTTTGCTC
CCCCAGCCTGCTGCTGCGACCCCGGTGGCGTGTTCGTCTCCGAGTCCGAGTTCCGCGGAC
GCCTCCTGCTCCGCTCCCATCCTCCAGTCCCTCCTGTCCTGCTCCCGCGCGGCGGCGACC
GACCCTGGCCTCGCCGCCGCGGAGCTCGCCAGCGTCCGCGCCGCCGCGACTGACGCCGGG
GACCCATCTGAGCGCTTGGCCTTCTACTTCGCTGACGCGCTTAGTCGCCGCCTTGCGTGC
GGCACCGGAGCTCCGCCCTCCGCGGAGCCGGACGCGCGGTTCGCCTCCGACGAGCTCACG
CTCTGCTACAAGACGCTCAACGACGCCTGCCCCTACTCCAAGTTCGCGCACCTCACCGCC
AACCAGGCCATCCTGGAGGCCACAGGCGCGGCGACCAAGATCCACATAGTTGACTTCGGG
ATCGTGCAGGGCATCCAGTGGGCGGCGCTGCTTCAGGCGCTCGCCACCCGGCCCGAGGGG
AAGCCAACGCGGATACGGATCACCGGCGTCCCCTCGCCGCTCCTGGGGCCGCAGCCCGCG
GCGTCCCTCGCCGCCACCAATACCCGTCTCCGTGACTTCGCCAAGCTCCTCGGGGTGGAC
TTCGAGTTCGTCCCATTGCTCCGGCCTGTGCACGAGCTCAACAAGTCGGATTTCTTGGTT
GAACCTGACGAGGCCGTGGCCGTCAATTTCATGCTGCAGCTGTACCACCTTCTTGGCGAC
TCGGACGAGCTAGTGAGAAGAGTGCTTCGTCTTGCCAAATCGCTCAGTCCAGCAGTGGTC
ACACTTGGAGAGTACGAGGTCAGCCTGAACCGAGCTGGGTTCGTCGACCGGTTCGCCAAT
GCGTTGAGCTATTACCGGTCATTGTTCGAGTCGCTGGATGTGGCAATGACCCGGGACTCA
CCGGAGAGGGTGAGGGTGGAGCGTTGGATGTTCGGGGAGCGAATTCAGAGGGCCGTCGGG
CCGGAGGAAGGCGCAGACCGGACGGAGAGGATGGCCGGCAGCAGCGAGTGGCAGACCCTG
ATGGAGTGGTGCGGCTTCGAGCCCGTGCCGCTCAGCAACTATGCCAGGAGCCAGGCTGAT
CTTTTGCTCTGGAACTATGATTCCAAGTACAAGTATTCACTTGTTGAGTTGCCACCGGCG
TTCTTGTCCTTGGCATGGGAGAAACGGCCATTGCTTACTGTGTCTGCTTGGAGGTGA

Peptide Sequence

PEP ID

Os03t0723000-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:29370897:29372880:1 gene:Os03g0723000 transcript:Os03t0723000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW-LIKE7, SCARECROW-LIKE 7 description:GRAS transcription factor domain containing protein. (Os03t0723000-01);GRAS transcription factor domain containing protein. (Os03t0723000-02)
Sequence

MAYMCADSGNLMAIAQQVIQQQQQQQQQQQRHHHHHHLPPPPPPQSMAPHHHQQKHHHHH
QQMPAMPQAPPSSHGQIPGQLAYGGGAAWPAGEHFFADAFGASAGDAVFSDLAAAADFDS
DGWMESLIGDAPFQDSDLERLIFTTPPPPVPSPPPTHAAATATATAATAAPRPEAAPALL
PQPAAATPVACSSPSPSSADASCSAPILQSLLSCSRAAATDPGLAAAELASVRAAATDAG
DPSERLAFYFADALSRRLACGTGAPPSAEPDARFASDELTLCYKTLNDACPYSKFAHLTA
NQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPTRIRITGVPSPLLGPQPA
ASLAATNTRLRDFAKLLGVDFEFVPLLRPVHELNKSDFLVEPDEAVAVNFMLQLYHLLGD
SDELVRRVLRLAKSLSPAVVTLGEYEVSLNRAGFVDRFANALSYYRSLFESLDVAMTRDS
PERVRVERWMFGERIQRAVGPEEGADRTERMAGSSEWQTLMEWCGFEPVPLSNYARSQAD
LLLWNYDSKYKYSLVELPPAFLSLAWEKRPLLTVSAWR

Transcript Sequence

Transcript ID

Os03t0723000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:29370897:29372880:1 gene:Os03g0723000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW-LIKE7, SCARECROW-LIKE 7 description:GRAS transcription factor domain containing protein. (Os03t0723000-01);GRAS transcription factor domain containing protein. (Os03t0723000-02)
Sequence

GTCTTCTTCCCCCCCTTCCTCTCCACCACCCCCGATTCGTCGTCCACCACCGTTCGACGA
GTTTCTCGCAGATCGGGCGGGGGCGCGCCGGGATGGCGTACATGTGCGCGGACAGCGGCA
ACCTCATGGCCATCGCGCAGCAGGTGATCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGC
AGAGGCACCACCACCACCACCATCTGCCGCCGCCGCCGCCGCCGCAGTCGATGGCGCCGC
ACCACCACCAGCAGAAGCACCACCACCACCACCAGCAGATGCCGGCGATGCCGCAGGCGC
CGCCCTCGTCGCACGGCCAGATCCCGGGCCAGCTCGCGTACGGTGGCGGCGCGGCGTGGC
CCGCCGGGGAGCACTTCTTCGCGGACGCGTTCGGGGCGTCCGCCGGCGACGCGGTGTTCT
CCGACCTCGCGGCGGCCGCGGACTTCGACTCTGATGGGTGGATGGAGAGCCTTATTGGGG
ACGCCCCCTTCCAGGACTCCGACCTGGAACGCCTCATCTTCACCACCCCGCCGCCGCCCG
TGCCGTCCCCACCCCCCACGCATGCCGCCGCCACCGCCACCGCCACCGCCGCCACCGCCG
CTCCTCGACCTGAGGCTGCACCGGCTTTGCTCCCCCAGCCTGCTGCTGCGACCCCGGTGG
CGTGTTCGTCTCCGAGTCCGAGTTCCGCGGACGCCTCCTGCTCCGCTCCCATCCTCCAGT
CCCTCCTGTCCTGCTCCCGCGCGGCGGCGACCGACCCTGGCCTCGCCGCCGCGGAGCTCG
CCAGCGTCCGCGCCGCCGCGACTGACGCCGGGGACCCATCTGAGCGCTTGGCCTTCTACT
TCGCTGACGCGCTTAGTCGCCGCCTTGCGTGCGGCACCGGAGCTCCGCCCTCCGCGGAGC
CGGACGCGCGGTTCGCCTCCGACGAGCTCACGCTCTGCTACAAGACGCTCAACGACGCCT
GCCCCTACTCCAAGTTCGCGCACCTCACCGCCAACCAGGCCATCCTGGAGGCCACAGGCG
CGGCGACCAAGATCCACATAGTTGACTTCGGGATCGTGCAGGGCATCCAGTGGGCGGCGC
TGCTTCAGGCGCTCGCCACCCGGCCCGAGGGGAAGCCAACGCGGATACGGATCACCGGCG
TCCCCTCGCCGCTCCTGGGGCCGCAGCCCGCGGCGTCCCTCGCCGCCACCAATACCCGTC
TCCGTGACTTCGCCAAGCTCCTCGGGGTGGACTTCGAGTTCGTCCCATTGCTCCGGCCTG
TGCACGAGCTCAACAAGTCGGATTTCTTGGTTGAACCTGACGAGGCCGTGGCCGTCAATT
TCATGCTGCAGCTGTACCACCTTCTTGGCGACTCGGACGAGCTAGTGAGAAGAGTGCTTC
GTCTTGCCAAATCGCTCAGTCCAGCAGTGGTCACACTTGGAGAGTACGAGGTCAGCCTGA
ACCGAGCTGGGTTCGTCGACCGGTTCGCCAATGCGTTGAGCTATTACCGGTCATTGTTCG
AGTCGCTGGATGTGGCAATGACCCGGGACTCACCGGAGAGGGTGAGGGTGGAGCGTTGGA
TGTTCGGGGAGCGAATTCAGAGGGCCGTCGGGCCGGAGGAAGGCGCAGACCGGACGGAGA
GGATGGCCGGCAGCAGCGAGTGGCAGACCCTGATGGAGTGGTGCGGCTTCGAGCCCGTGC
CGCTCAGCAACTATGCCAGGAGCCAGGCTGATCTTTTGCTCTGGAACTATGATTCCAAGT
ACAAGTATTCACTTGTTGAGTTGCCACCGGCGTTCTTGTCCTTGGCATGGGAGAAACGGC
CATTGCTTACTGTGTCTGCTTGGAGGTGAGGGTAGTTTTTTTGGGAGTATTTGGGGGAAT
GTGTGGCGTTGTGATAGAACCTGGGAGGAAATAGTTAGGAGAAATCATTTTGCAGCTTTT
GTTGTAGTTTCCTCCAAAACTGTGTTTAGGATGATTGGTATAATTGGGAAATTTTAGCTG
AATT