Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0722400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:29305425:29311650:1 gene:Os03g0722400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Decrease in DNA Methylation 1b description:Chromatin remodeling factor, Genome-wide DNA methylation (Os03t0722400-01)
Sequence	ATGGTGGAAGGAATGGTGGTCGCTGTGGCAAATGGGACGAAGGTGGAAGCAGCACCGGCC GCCGGCGCCGGCGCCGCTGCCAACGCGGATTCCCCTACATCCGTTCTGGAGGATGAGATT TCTGAATGTAAGAATGGGGATGCCTCGGATACCGTGGAGGCAATTAAGCAAGAGGATGAT CATCTCAAGGTGCTTGCTGAGGAGAGAGCTGATGATTTTGTGGATGCAAGTTCATCCCTG ACTGTGGAACTTGCGGCCAACAACGGTGATTTGTCACCTCACCCTGTGCCGGTGAAGGAA GAAGACCAGTTATTGGAGCCTGTCAAGGAGGAAAAAGCTGATGATTTTGTGGATGCAACT TCATCTCTACCAATTGACCTTGAGGCCAAGAATGGTGATGCATCCCTCATCACTGATGCG ATGAAGGAGGAGGAAGACAAGTTGCACGAGGCCCGGGTTAAGGCTGACGAAGAAGAGGAG GCACGGAAGAGGGCAGAAGCTGCAAGACTTGCTTTTGATCCAAATGCACGGTTTAACAAG TTGGACGAGCTGCTGACACAGACACAACTCTATTCAGAATTTCTACTTGAGAAGATGGAG ACGATTGCTGATGTGGAGGGTGTTGACACCCCGGATGAAGAGGAGCCAGTAGAAGAGAAG AAGAAAGGGCGTGGGAGAAAGAGGAAAGCTACTTCTGCACCAAAATACAATAATAAAAAG GCCAAGAAAGCAGTGGCAGCCATGCTTACAAGATCTCGTGAAGATTGCTCGCCTGAGGAT TGTACTCTCACAGAAGAAGAAAGGTGGGAAAAAGAGCAAGCCAGACTTGTTCCTCTAATG ACTGGCGGGAAGTTGAAGTCCTACCAGATAAAGGGTGTTAAGTGGTTAATATCACTTTGG CAGAATGGGCTTAATGGGATATTGGCTGATCAAATGGGCCTTGGGAAAACAATACAGACT ATCGGTTTTCTTGCCCATCTCAAGGGGAAGGGTCTTGATGGTCCATACCTGATAATAGCT CCTCTATCCACTCTCTCGAACTGGGTGAACGAGATCTCAAGGTTTGTTCCATCTATGACC GGTGTGATCTACCATGGGGATAAAGCAGCTCGGGCAGAGATAAGGAGAAAATTCATGCCC AAAACCACAGGCCCAAATTTTCCATTAATCGTAACTTCCTATGAGATGGCTATGTCAGAC GCAAAACAACTTGCTCATTATAAGTGGAAGTATGTTATTGTGGATGAGGGGCATCGGCTA AAGAATTCAAAGTGCATATTATTAAGGGAGTTAAAGCGCCTGCCAATGGATAATAAGCTC CTTTTGACTGGAACACCTCTTCAGAATAATCTAGCAGAACTGTGGTCACTGCTGAACTTC ATTTTGCCTGATATATTCTCATCGCATCAGGAGTTCGAGTCATGGTTTGATTTTTGTGCA AAAGGGGGTGAAGAAGAACAAGAGGAAAGTGAAGAGAAGAGAAAAGTCGATGTTGTTTCA AAGCTTCATGCCATATTGCGCCCCTTCCTTCTAAGGCGGATGAAGGAGGATGTAGAGCAT ATGCTTCCACGAAAGAAAGAGATAATCATTTATGCTAACATGACTAACCATCAGAAAGAA ATCCAGAATCACTTGGTTGAACAAACATTTGATGAATACCTGCATGAAAAATCAGAAATT GTTCTGCGGAGACCTGGCATTAAGGCGAAGCTGAATAACCTTTTAATTCAACTGAGGAAA AATTGCAACCATCCTGATCTTTTGGAGTCCGCATATGACTCATCAGGTATGTACCCACCT GTTGAGAAGCTCTTAGAACAATGCGGTAAATTTCAGCTCTTGAACAGATTGCTAAATTTG CTGCTTGCACGGAAGCACAAGGTTCTAATATTTTCACAGTGGACAAAAGTTTTGGACATT ATCGAGTACTACTTGGAAACAAAAGGCCTTCAGGTTTGCCGAATTGATGGCAGTGTTAAG TTGGAAGAGAGGAGGAGGCAGATAGCAGAATTTAATGACTTGAACAGCAGCATGAATATC TTTATTCTAAGCACACGGGCTGGTGGGCTGGGTATCAATCTTACTTCGGCTGATACCTGT ATCCTATATGATAGTGACTGGAATCCTCAGATGGATTTGCAGGCCATGGATCGATGCCAC CGGATTGGTCAAACACGCCCAGTTCACGTCTACCGGTTGGCAACATCACATTCTGTTGAG GGCCGGATCATCAAGAAAGCATTTGGAAAGTTGAGGCTGGAACATGTGGTGATCGGGAAG GGTCAGTTTGAACAAGACAGAGCCAAACCTAATGCACTAGACGAGGCGGAGTTGCTGGCG CTGCTCAGGGACGAGCAGGACGAGGAGGACCGGATGATCCAGACGGACATCACCGACGAG GATCTCCTGAAGGTGATGGACCGGAGCGACCTTACAGGCCCTCCTGCCAACGCCGACGCC GCCCCTCTCGTGCCCCTGAAGGGACCCGGCTGGGAGGTGGTGGTGCCGACGAAGAGCGGC GGCGGCATGCTCACGTCGCTCACCAGCTAG

Peptide Sequence

PEP ID	Os03t0722400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:29305425:29311650:1 gene:Os03g0722400 transcript:Os03t0722400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Decrease in DNA Methylation 1b description:Chromatin remodeling factor, Genome-wide DNA methylation (Os03t0722400-01)
Sequence	MVEGMVVAVANGTKVEAAPAAGAGAAANADSPTSVLEDEISECKNGDASDTVEAIKQEDD HLKVLAEERADDFVDASSSLTVELAANNGDLSPHPVPVKEEDQLLEPVKEEKADDFVDAT SSLPIDLEAKNGDASLITDAMKEEEDKLHEARVKADEEEEARKRAEAARLAFDPNARFNK LDELLTQTQLYSEFLLEKMETIADVEGVDTPDEEEPVEEKKKGRGRKRKATSAPKYNNKK AKKAVAAMLTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLW QNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMT GVIYHGDKAARAEIRRKFMPKTTGPNFPLIVTSYEMAMSDAKQLAHYKWKYVIVDEGHRL KNSKCILLRELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFCA KGGEEEQEESEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTNHQKE IQNHLVEQTFDEYLHEKSEIVLRRPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGMYPP VEKLLEQCGKFQLLNRLLNLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVK LEERRRQIAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCH RIGQTRPVHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLA LLRDEQDEEDRMIQTDITDEDLLKVMDRSDLTGPPANADAAPLVPLKGPGWEVVVPTKSG GGMLTSLTS

Transcript Sequence

Transcript ID	Os03t0722400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29305425:29311650:1 gene:Os03g0722400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Decrease in DNA Methylation 1b description:Chromatin remodeling factor, Genome-wide DNA methylation (Os03t0722400-01)
Sequence	CAAACCCCTCCTCCCCACTGACTTCCGAGGAGGTCAGGACGAGCGCCACGGCCGCCAGCC CGCCGCCGAGCGACATCCCCTTCGGCCGCACGCCGCCCGCCACCAGCCGCACTACGCGCG CCGCCAGCCGTTCGGCGGCGACGAGCGGGTACCCCCGGCCCCGCGGGCGGAGGAGTTGAA GAGACCGAGGAGGCCGCCGGCGGAGCGGGAGCACGGAGCGGAAGGGGGAGAGGAAGAAGA GGGGTCGGATAGTAAGGGCTTGAATTCGGAGGCGGCTCATGGTGGAAGGAATGGTGGTCG CTGTGGCAAATGGGACGAAGGTGGAAGCAGCACCGGCCGCCGGCGCCGGCGCCGCTGCCA ACGCGGATTCCCCTACATCCGTTCTGGAGGATGAGATTTCTGAATGTAAGAATGGGGATG CCTCGGATACCGTGGAGGCAATTAAGCAAGAGGATGATCATCTCAAGGTGCTTGCTGAGG AGAGAGCTGATGATTTTGTGGATGCAAGTTCATCCCTGACTGTGGAACTTGCGGCCAACA ACGGTGATTTGTCACCTCACCCTGTGCCGGTGAAGGAAGAAGACCAGTTATTGGAGCCTG TCAAGGAGGAAAAAGCTGATGATTTTGTGGATGCAACTTCATCTCTACCAATTGACCTTG AGGCCAAGAATGGTGATGCATCCCTCATCACTGATGCGATGAAGGAGGAGGAAGACAAGT TGCACGAGGCCCGGGTTAAGGCTGACGAAGAAGAGGAGGCACGGAAGAGGGCAGAAGCTG CAAGACTTGCTTTTGATCCAAATGCACGGTTTAACAAGTTGGACGAGCTGCTGACACAGA CACAACTCTATTCAGAATTTCTACTTGAGAAGATGGAGACGATTGCTGATGTGGAGGGTG TTGACACCCCGGATGAAGAGGAGCCAGTAGAAGAGAAGAAGAAAGGGCGTGGGAGAAAGA GGAAAGCTACTTCTGCACCAAAATACAATAATAAAAAGGCCAAGAAAGCAGTGGCAGCCA TGCTTACAAGATCTCGTGAAGATTGCTCGCCTGAGGATTGTACTCTCACAGAAGAAGAAA GGTGGGAAAAAGAGCAAGCCAGACTTGTTCCTCTAATGACTGGCGGGAAGTTGAAGTCCT ACCAGATAAAGGGTGTTAAGTGGTTAATATCACTTTGGCAGAATGGGCTTAATGGGATAT TGGCTGATCAAATGGGCCTTGGGAAAACAATACAGACTATCGGTTTTCTTGCCCATCTCA AGGGGAAGGGTCTTGATGGTCCATACCTGATAATAGCTCCTCTATCCACTCTCTCGAACT GGGTGAACGAGATCTCAAGGTTTGTTCCATCTATGACCGGTGTGATCTACCATGGGGATA AAGCAGCTCGGGCAGAGATAAGGAGAAAATTCATGCCCAAAACCACAGGCCCAAATTTTC CATTAATCGTAACTTCCTATGAGATGGCTATGTCAGACGCAAAACAACTTGCTCATTATA AGTGGAAGTATGTTATTGTGGATGAGGGGCATCGGCTAAAGAATTCAAAGTGCATATTAT TAAGGGAGTTAAAGCGCCTGCCAATGGATAATAAGCTCCTTTTGACTGGAACACCTCTTC AGAATAATCTAGCAGAACTGTGGTCACTGCTGAACTTCATTTTGCCTGATATATTCTCAT CGCATCAGGAGTTCGAGTCATGGTTTGATTTTTGTGCAAAAGGGGGTGAAGAAGAACAAG AGGAAAGTGAAGAGAAGAGAAAAGTCGATGTTGTTTCAAAGCTTCATGCCATATTGCGCC CCTTCCTTCTAAGGCGGATGAAGGAGGATGTAGAGCATATGCTTCCACGAAAGAAAGAGA TAATCATTTATGCTAACATGACTAACCATCAGAAAGAAATCCAGAATCACTTGGTTGAAC AAACATTTGATGAATACCTGCATGAAAAATCAGAAATTGTTCTGCGGAGACCTGGCATTA AGGCGAAGCTGAATAACCTTTTAATTCAACTGAGGAAAAATTGCAACCATCCTGATCTTT TGGAGTCCGCATATGACTCATCAGGTATGTACCCACCTGTTGAGAAGCTCTTAGAACAAT GCGGTAAATTTCAGCTCTTGAACAGATTGCTAAATTTGCTGCTTGCACGGAAGCACAAGG TTCTAATATTTTCACAGTGGACAAAAGTTTTGGACATTATCGAGTACTACTTGGAAACAA AAGGCCTTCAGGTTTGCCGAATTGATGGCAGTGTTAAGTTGGAAGAGAGGAGGAGGCAGA TAGCAGAATTTAATGACTTGAACAGCAGCATGAATATCTTTATTCTAAGCACACGGGCTG GTGGGCTGGGTATCAATCTTACTTCGGCTGATACCTGTATCCTATATGATAGTGACTGGA ATCCTCAGATGGATTTGCAGGCCATGGATCGATGCCACCGGATTGGTCAAACACGCCCAG TTCACGTCTACCGGTTGGCAACATCACATTCTGTTGAGGGCCGGATCATCAAGAAAGCAT TTGGAAAGTTGAGGCTGGAACATGTGGTGATCGGGAAGGGTCAGTTTGAACAAGACAGAG CCAAACCTAATGCACTAGACGAGGCGGAGTTGCTGGCGCTGCTCAGGGACGAGCAGGACG AGGAGGACCGGATGATCCAGACGGACATCACCGACGAGGATCTCCTGAAGGTGATGGACC GGAGCGACCTTACAGGCCCTCCTGCCAACGCCGACGCCGCCCCTCTCGTGCCCCTGAAGG GACCCGGCTGGGAGGTGGTGGTGCCGACGAAGAGCGGCGGCGGCATGCTCACGTCGCTCA CCAGCTAGCTGCTTTCTTTCATCGCTCGCTGCGCACCTCAGGCCATAGCCCTAGTAAGGC TGCCGGCTAAGGTGCCTCTTGAGCTGTGCTGCATCTGCTGATGAGACGACGCTTTTGTGA TCCCACCCCAAGTAATTACTGACTGGGCATTGCACTTGCGCCAGTACACTAGGAAGTGAT AAGGTAGTGTGCATCTAATCTGTCGTAAGTATCTCTGTTGTTGGCTCAGCTGCTGCATTT CATTTTGCAAGGCCCAAAGCCTTTTCTAGAATGCTAGTGTAAGAACGTGGTATTTGAGAA CATAATATCCTTGTCTACCTGCTTTGGTA