Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0722000-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:29292555:29293651:-1 gene:Os03g0722000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA112 description:Hyccin domain containing protein. (Os03t0722000-01);Hypothetical conserved gene. (Os03t0722000-02)
Sequence

AAGCCGCTCGCCGGGTTCGAGGCCGTGCTCCTGGCGCTGTACGCGCACGCCGCGGCGCAG
CGGGGCTCCGGGGAGGCCGAGACCGTGTCGCTGCCGAACCTGGCCAACCCCAGCGTGTAC
CACGACGCGAAGGTGCCGCCCAAGACCAAGGCCGCCGAGCTCGACGTCGCCGTGCTCTCC
CCCGCTCTGGAGCCCCACGGCACCATGCGCGCCACGCGCCGCGCCCGGATTGTCGGCGCC
GTGCTGGAGCTCTACCACGGCAAGCTCGCCATCATGCCGCTCTCCTCCAAGATGGAATTC
TGCGAGTTCTGCGTCGCCTGGACCGGGAACCGCAGCAAGCTGGACGACAAGCCGCGCGTC
GCGGCTGCCTCCGAGCCTGCCGCCGCCGAGGAGAAGTTGCGGAGGGTGCCATTGCCATGG
GAGCTGTTCCAGCCGGTGCTGCGGATCGTGGCACACTGCCTGCTGGGCCCGACGAACTCC
GACGAGCTGAAGACGCAGGCCACCCGCGCCGCGGAGTGCATGTACTGGAGAGCCGCGGAG
ACCATGGACGCGCGCTCGGTGCTCGCCACCAGGAGCCTCGTCCGGCTGTCCCAGATGACG
GAGGAGCCGATCCCTGAGCCGTCCTTCTCCGGCGCCGTCGAGACGAACATGGCGGAGCTG
GAGGCCATGAGGGCTAACATCCTTAGCAACAAGAACTGA

Peptide Sequence

PEP ID

Os03t0722000-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:29292555:29293651:-1 gene:Os03g0722000 transcript:Os03t0722000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA112 description:Hyccin domain containing protein. (Os03t0722000-01);Hypothetical conserved gene. (Os03t0722000-02)
Sequence

KPLAGFEAVLLALYAHAAAQRGSGEAETVSLPNLANPSVYHDAKVPPKTKAAELDVAVLS
PALEPHGTMRATRRARIVGAVLELYHGKLAIMPLSSKMEFCEFCVAWTGNRSKLDDKPRV
AAASEPAAAEEKLRRVPLPWELFQPVLRIVAHCLLGPTNSDELKTQATRAAECMYWRAAE
TMDARSVLATRSLVRLSQMTEEPIPEPSFSGAVETNMAELEAMRANILSNKN

Transcript Sequence

Transcript ID

Os03t0722000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:29292555:29293651:-1 gene:Os03g0722000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA112 description:Hyccin domain containing protein. (Os03t0722000-01);Hypothetical conserved gene. (Os03t0722000-02)
Sequence

GAAGCCGCTCGCCGGGTTCGAGGCCGTGCTCCTGGCGCTGTACGCGCACGCCGCGGCGCA
GCGGGGCTCCGGGGAGGCCGAGACCGTGTCGCTGCCGAACCTGGCCAACCCCAGCGTGTA
CCACGACGCGAAGGTGCCGCCCAAGACCAAGGCCGCCGAGCTCGACGTCGCCGTGCTCTC
CCCCGCTCTGGAGCCCCACGGCACCATGCGCGCCACGCGCCGCGCCCGGATTGTCGGCGC
CGTGCTGGAGCTCTACCACGGCAAGCTCGCCATCATGCCGCTCTCCTCCAAGATGGAATT
CTGCGAGTTCTGCGTCGCCTGGACCGGGAACCGCAGCAAGCTGGACGACAAGCCGCGCGT
CGCGGCTGCCTCCGAGCCTGCCGCCGCCGAGGAGAAGTTGCGGAGGGTGCCATTGCCATG
GGAGCTGTTCCAGCCGGTGCTGCGGATCGTGGCACACTGCCTGCTGGGCCCGACGAACTC
CGACGAGCTGAAGACGCAGGCCACCCGCGCCGCGGAGTGCATGTACTGGAGAGCCGCGGA
GACCATGGACGCGCGCTCGGTGCTCGCCACCAGGAGCCTCGTCCGGCTGTCCCAGATGAC
GGAGGAGCCGATCCCTGAGCCGTCCTTCTCCGGCGCCGTCGAGACGAACATGGCGGAGCT
GGAGGCCATGAGGGCTAACATCCTTAGCAACAAGAACTGAACTGAACTGAACGCAGTTGA
ATTAGTCGTCAGGATTCAGGAATTTGATCAGACACTCACACTGCAACACGAATTACAAGT
TAAGTTACAACGCACACTGCAAGCCTGCAAAAGTTAGCAGTGTTGGCGCTTTTGTTAGTC
AGGTACCTAGCACAAGTCTTCTCTCTAATGTGAGAAATTGAGAGATTGATCAGTAGATGG
TGTACAGGTCTCTTCTCTCTGATGTGAGAAACCGAGAGATTGATCGGTAGATGTCTAGAT
GTTGTGTTATTGTGTTACTGGCCACAGAATATTCAGTCTGGATGTTTCTTTGATCACAAA
ATATTCAGTCTGGATGTTTAACAGACAAGTATTCATTTGGTTTCATGAATGGAAGTACTA
TTGCATTTTGATGGAGT