Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0719100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:29126803:29134828:1 gene:Os03g0719100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SIZ2 description:SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stress response, Stress adaptation (Os03t0719100-01)
Sequence	ATGGCGCTCGACCCCGCCGACGATCCGCTGCTCGCCGATTGCAAGTACAAGTTGAATCAC TTTAGAATAAAAGAGCTAAAGGATGTCCTGCATCAGCTTGGACTTCCAAAGCAAGGAAGG AAACAGGAACTTGTGGACAAAATTATAGCAGTATTGTCTGATCAACAAGAACAAGACTCC AGATTGAATGGCTTGCCAAACAAAAAGATGGTTGGGAAAGAAACTGTGGCTAAAATAGTT GATGACACTTTTGCAAAAATGAATGGCTCCACAAATGCTGTTCCAGCCTCTAGAAATCAG ACTGACTCGGGGCACATTGTAAAGCCTAAAAGGAAGTCAGATGATTCTGCTCAGTTGGAT GTCAAAGTCCGTTGTCCCTGTGGTTATTCCATGGCCAATGATTCCATGATTAAGTGTGAA GGTCCACAATGCAATACACAGCAACATGTAGGCTGCGTTATCATATCTGAGAAGCCTGCA GACAGTGTTCCTCCAGAATTACCACCACACTTTTATTGTGATATGTGCCGAATCACTCGA GCTGACCCTTTCTGGGTTACTGTTAATCATCCTGTACTTCCAGTCTCAATAACTCCCTGT AAAGTAGCATCTGATGGGTCATATGCTGTACAGTATTTCGAGAAGACCTTTCCGCTATCA AGAGCTAATTGGGAGATGCTTCAGAAAGATGAATATGACCTCCAGGTTTGGTGTATCCTA TTCAATGATAGCGTACCTTTCAGGATGCAGTGGCCTTTACATTCTGATATTCAAATTAAT GGTATTCCTATTAGGGTTGTCAACAGGCAACCCACACAACAGTTAGGGGTGAATGGTAGA GACGATGGTCCAGTTTTAACAGCATATGTGAGAGAAGGGTCTAATAAGATTGTCCTATCT AGAAGTGACTCTCGCACATTCTGTTTGGGAGTCAGGATTGCCAAGAGGAGATCTGTAGAA CAGGTCCTATCTTTGGTGCCAAAGGAACAAGATGGTGAGAACTTTGATAATGCCCTTGCT CGTGTGCGTCGCTGTGTTGGTGGTGGAACCGAGGCAGATAATGCTGACAGTGACAGTGAT ATTGAAGTTGTAGCTGATTCTGTCTCTGTGAATCTCCGATGCCCTATGACTGGTTCAAGG ATCAAGATAGCTGGCCGGTTCAAACCCTGCGTTCACATGGGTTGTTTTGATTTAGAAGCT TTTGTGGAACTTAATCAACGTTCAAGAAAGTGGCAGTGCCCAATTTGCCTGAAAAACTAC TCTTTGGACAACATAATCATTGATCCTTACTTCAACCGCATAACTGCTTTGGTCCAAAGT TGTGGAGATGATGTATCTGAAATTGATGTCAAGCCTGACGGTTCCTGGAGAGTCAAGGGT GGAGCAGAACTGAAGGGTCTTGCACAGTGGCATTTACCTGATGGCACTCTCTGTATGCCT ACAGATACAAGGTCCAAGCCCAACATAAGAATTGTAAAGCAAGAGATTAAAGAAGAACCG TTGTCTGAAGAAACAGGTGGCCGTCTTAAGTTGGGAATCAGAAGAAACAACAATGGCCAG TGGGAAATTAACAAGAGATTGGATTCTAACAATGGTCAGAATGGATATATTGAAGATGAA AACTGTGTTGTTTCAGCAAGCAACACTGATGATGAGAACAGCAAAAATGGAATCTATAAT CCAGAACCAGGGCAATTCGATCAACTAACCAGCAATATCTATGATCTTGATTCTTCTCCT ATGGATGCACATTTTCCTCCAGCACCAACAGAGCAGGATGTAATAGTTCTGAGTGACTCA GATGATGATAATGTTATGGTGTTATCACCTGGTGATGTTAATTTCAGTTCAGCACATGAC AATGGGAATGCATTCCCACCCAACCCACCTGAAGCTTCAGGAATTTGTGGGGAACAACCT AGAGGAGCCGGCCCAGATGTGACTTCATTTCTTGACGGTTTCGATGATCTGGAACTGCCA TTTTGGGAATCTTCGAGCTCTCAAGATGCTGCAGGCACACAGGTGACAGACAATCAATGC GAAATGCAAAATTTCATTGTCAACCATCAATTTTTGCACGAGCCAATTTTAGGGGTTAAC TTGGGTGGAACAGCAGCATCAAACACACTGGAATGTGAGCATGATGGTGCGTTACAAGCT TGTCAGTCGAGTGATCAAGATGGTGATCAGAATCAAACATGCCATGATGGGCACTCCGGG GATTTGACAAATCTTAGTATCATTAGCACTCAAGATAGTTTAACTAATGGCAAAAATGCT TCTCAGAAAAGGACAAACTGTGAAGATGGCACGGCAGGTTTAGACGGCTCAGTTGTCAGG AGCGCGAATGGCTTGAGAGGAGAGATGCCACCACTTGGGCAGGAGCAGGATCGTACAGTT AGACAAAAGTTGATATTAACAATCGAGTCAGACTCTGATTAG

Peptide Sequence

PEP ID	Os03t0719100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:29126803:29134828:1 gene:Os03g0719100 transcript:Os03t0719100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SIZ2 description:SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stress response, Stress adaptation (Os03t0719100-01)
Sequence	MALDPADDPLLADCKYKLNHFRIKELKDVLHQLGLPKQGRKQELVDKIIAVLSDQQEQDS RLNGLPNKKMVGKETVAKIVDDTFAKMNGSTNAVPASRNQTDSGHIVKPKRKSDDSAQLD VKVRCPCGYSMANDSMIKCEGPQCNTQQHVGCVIISEKPADSVPPELPPHFYCDMCRITR ADPFWVTVNHPVLPVSITPCKVASDGSYAVQYFEKTFPLSRANWEMLQKDEYDLQVWCIL FNDSVPFRMQWPLHSDIQINGIPIRVVNRQPTQQLGVNGRDDGPVLTAYVREGSNKIVLS RSDSRTFCLGVRIAKRRSVEQVLSLVPKEQDGENFDNALARVRRCVGGGTEADNADSDSD IEVVADSVSVNLRCPMTGSRIKIAGRFKPCVHMGCFDLEAFVELNQRSRKWQCPICLKNY SLDNIIIDPYFNRITALVQSCGDDVSEIDVKPDGSWRVKGGAELKGLAQWHLPDGTLCMP TDTRSKPNIRIVKQEIKEEPLSEETGGRLKLGIRRNNNGQWEINKRLDSNNGQNGYIEDE NCVVSASNTDDENSKNGIYNPEPGQFDQLTSNIYDLDSSPMDAHFPPAPTEQDVIVLSDS DDDNVMVLSPGDVNFSSAHDNGNAFPPNPPEASGICGEQPRGAGPDVTSFLDGFDDLELP FWESSSSQDAAGTQVTDNQCEMQNFIVNHQFLHEPILGVNLGGTAASNTLECEHDGALQA CQSSDQDGDQNQTCHDGHSGDLTNLSIISTQDSLTNGKNASQKRTNCEDGTAGLDGSVVR SANGLRGEMPPLGQEQDRTVRQKLILTIESDSD

Transcript Sequence

Transcript ID	Os03t0719100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29126803:29134828:1 gene:Os03g0719100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SIZ2 description:SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stress response, Stress adaptation (Os03t0719100-01)
Sequence	ACTCCAGCCGCCCCCCTGGCTGGCTCTGCCTCTGGCTCCGGTTCTTGCCGCTCGCGATCC CCAAAGCGCGGCAATCCGCCGCACGCGCGCGCGCGCGCTCGCACTCCCTCCGCCCCGCCG CGCCGTCCCTCCTGACGCGGCGTCTCGCCGCCGCCGCCGCCGCCGCCAGGTTGGTGGTCG TCGCTTCAGGTTCGCGGAAGCCAGCGCGTGGGCAAGCGTCCTGGCCTCCAGGGACGAGCC AGGGTTCGCCGGGAAGGAGGACGGTGAGTTCATTCCCCATCGGATTTTCCAGCCATGGCG CTCGACCCCGCCGACGATCCGCTGCTCGCCGATTGCAAGTACAAGTTGAATCACTTTAGA ATAAAAGAGCTAAAGGATGTCCTGCATCAGCTTGGACTTCCAAAGCAAGGAAGGAAACAG GAACTTGTGGACAAAATTATAGCAGTATTGTCTGATCAACAAGAACAAGACTCCAGATTG AATGGCTTGCCAAACAAAAAGATGGTTGGGAAAGAAACTGTGGCTAAAATAGTTGATGAC ACTTTTGCAAAAATGAATGGCTCCACAAATGCTGTTCCAGCCTCTAGAAATCAGACTGAC TCGGGGCACATTGTAAAGCCTAAAAGGAAGTCAGATGATTCTGCTCAGTTGGATGTCAAA GTCCGTTGTCCCTGTGGTTATTCCATGGCCAATGATTCCATGATTAAGTGTGAAGGTCCA CAATGCAATACACAGCAACATGTAGGCTGCGTTATCATATCTGAGAAGCCTGCAGACAGT GTTCCTCCAGAATTACCACCACACTTTTATTGTGATATGTGCCGAATCACTCGAGCTGAC CCTTTCTGGGTTACTGTTAATCATCCTGTACTTCCAGTCTCAATAACTCCCTGTAAAGTA GCATCTGATGGGTCATATGCTGTACAGTATTTCGAGAAGACCTTTCCGCTATCAAGAGCT AATTGGGAGATGCTTCAGAAAGATGAATATGACCTCCAGGTTTGGTGTATCCTATTCAAT GATAGCGTACCTTTCAGGATGCAGTGGCCTTTACATTCTGATATTCAAATTAATGGTATT CCTATTAGGGTTGTCAACAGGCAACCCACACAACAGTTAGGGGTGAATGGTAGAGACGAT GGTCCAGTTTTAACAGCATATGTGAGAGAAGGGTCTAATAAGATTGTCCTATCTAGAAGT GACTCTCGCACATTCTGTTTGGGAGTCAGGATTGCCAAGAGGAGATCTGTAGAACAGGTC CTATCTTTGGTGCCAAAGGAACAAGATGGTGAGAACTTTGATAATGCCCTTGCTCGTGTG CGTCGCTGTGTTGGTGGTGGAACCGAGGCAGATAATGCTGACAGTGACAGTGATATTGAA GTTGTAGCTGATTCTGTCTCTGTGAATCTCCGATGCCCTATGACTGGTTCAAGGATCAAG ATAGCTGGCCGGTTCAAACCCTGCGTTCACATGGGTTGTTTTGATTTAGAAGCTTTTGTG GAACTTAATCAACGTTCAAGAAAGTGGCAGTGCCCAATTTGCCTGAAAAACTACTCTTTG GACAACATAATCATTGATCCTTACTTCAACCGCATAACTGCTTTGGTCCAAAGTTGTGGA GATGATGTATCTGAAATTGATGTCAAGCCTGACGGTTCCTGGAGAGTCAAGGGTGGAGCA GAACTGAAGGGTCTTGCACAGTGGCATTTACCTGATGGCACTCTCTGTATGCCTACAGAT ACAAGGTCCAAGCCCAACATAAGAATTGTAAAGCAAGAGATTAAAGAAGAACCGTTGTCT GAAGAAACAGGTGGCCGTCTTAAGTTGGGAATCAGAAGAAACAACAATGGCCAGTGGGAA ATTAACAAGAGATTGGATTCTAACAATGGTCAGAATGGATATATTGAAGATGAAAACTGT GTTGTTTCAGCAAGCAACACTGATGATGAGAACAGCAAAAATGGAATCTATAATCCAGAA CCAGGGCAATTCGATCAACTAACCAGCAATATCTATGATCTTGATTCTTCTCCTATGGAT GCACATTTTCCTCCAGCACCAACAGAGCAGGATGTAATAGTTCTGAGTGACTCAGATGAT GATAATGTTATGGTGTTATCACCTGGTGATGTTAATTTCAGTTCAGCACATGACAATGGG AATGCATTCCCACCCAACCCACCTGAAGCTTCAGGAATTTGTGGGGAACAACCTAGAGGA GCCGGCCCAGATGTGACTTCATTTCTTGACGGTTTCGATGATCTGGAACTGCCATTTTGG GAATCTTCGAGCTCTCAAGATGCTGCAGGCACACAGGTGACAGACAATCAATGCGAAATG CAAAATTTCATTGTCAACCATCAATTTTTGCACGAGCCAATTTTAGGGGTTAACTTGGGT GGAACAGCAGCATCAAACACACTGGAATGTGAGCATGATGGTGCGTTACAAGCTTGTCAG TCGAGTGATCAAGATGGTGATCAGAATCAAACATGCCATGATGGGCACTCCGGGGATTTG ACAAATCTTAGTATCATTAGCACTCAAGATAGTTTAACTAATGGCAAAAATGCTTCTCAG AAAAGGACAAACTGTGAAGATGGCACGGCAGGTTTAGACGGCTCAGTTGTCAGGAGCGCG AATGGCTTGAGAGGAGAGATGCCACCACTTGGGCAGGAGCAGGATCGTACAGTTAGACAA AAGTTGATATTAACAATCGAGTCAGACTCTGATTAGCAGCTGATGCTATTTGATGTATGG TCCCTGCTATAGTGCTATGCCCCCCAGATGCATGCACCATCACCATCACTTATTTTTTGG CTGTGCACTAAGAAGGGCATCACTTCTTTTTTGGTTGTGCCCTAGTTGAGAAGGGATAGA TGTTGGAGCTATGGTGGATGGATTGATGTTTGGCGGCAAGAAGCTGGGTCGGTTATCCTT GCTTCTACTAAGGTGGTATTGATTGATACAGTTAGGTAGGGTAGGTCCATTGTGTAGGCA GCAATTTTGTAGCTAGCTTGCATATACATCACAATGGAATTGCAGTGACAGAAGTTAGCT GATGTAAATATCATATGATGCTTTTCTGTTGCCTGGTGTACATATTATATGATGTTTTTT TTTTCTGTTGGTTGGTTACATATAGAGAGTTACTCCC