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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0718500-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:29090580:29091512:1 gene:Os03g0718500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 11 description:Homeodomain-related domain containing protein. (Os03t0718500-00)
Sequence

ATGGAGCAGCAGCAGGAGCGGCCGCGGGAGGTGTACAGGGAGTGCATGCGCAACCACGCG
GCGAAGCTGGGGACCTACGCGAACGACGGCTGCTGCGAGTACACCCCCGACGACGGCCAC
CCGGCGGGCCTGCTCTGCGCGGCGTGCGGCTGCCACCGCAACTTCCACCGGAAGGACTTC
CTCGACGGCCGCGCCACCGCCGCCGCCGGAGGGGCGGGAGGCGCCGGCGTCGGCGTCGCG
CCAATGCTGCCGGCCCCCGGTGGAGGCGGGCCGCCGGGATACATGCACATGGCGGCGATG
GGAGGAGCGGTGGGCGGCGGCGGCGGCGTCGACGGCGGCGGCGGCTCCGGGGGGAGGCGG
CGGACGCGGACCAAGTTCACGGAGGAGCAGAAGGCGCGGATGCTGCGGTTCGCGGAGCGG
CTCGGGTGGCGGATGCCGAAGCGGGAGCCCGGCCGCGCGCCCGGGGACGACGAGGTGGCG
CGCTTCTGCCGGGAGATCGGCGTCAACCGGCAGGTCTTCAAGGTGTGGATGCACAACCAC
AAGGCCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCCCCGGCGCCGGTGGAGGCGCC
CAGACGTCGTCGTCGACGACCAGGGGCGGCGGCGACGTCGGGGTGGGCTTGTCGCCGGCG
ATGGGCGGCGACGGCGAGGACGACGAGGAGGTGAGGGGGAGCGAGATGTGCATGTAG

Peptide Sequence

PEP ID

Os03t0718500-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:29090580:29091512:1 gene:Os03g0718500 transcript:Os03t0718500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 11 description:Homeodomain-related domain containing protein. (Os03t0718500-00)
Sequence

MEQQQERPREVYRECMRNHAAKLGTYANDGCCEYTPDDGHPAGLLCAACGCHRNFHRKDF
LDGRATAAAGGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRR
RTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNH
KAGGGGGGGGSGGPGAGGGAQTSSSTTRGGGDVGVGLSPAMGGDGEDDEEVRGSEMCM

Transcript Sequence

Transcript ID

Os03t0718500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:29090580:29091512:1 gene:Os03g0718500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 11 description:Homeodomain-related domain containing protein. (Os03t0718500-00)
Sequence

GAGAGGACTAGAGGAGGAGGAAGAAGCAGCAATGGAGCAGCAGCAGGAGCGGCCGCGGGA
GGTGTACAGGGAGTGCATGCGCAACCACGCGGCGAAGCTGGGGACCTACGCGAACGACGG
CTGCTGCGAGTACACCCCCGACGACGGCCACCCGGCGGGCCTGCTCTGCGCGGCGTGCGG
CTGCCACCGCAACTTCCACCGGAAGGACTTCCTCGACGGCCGCGCCACCGCCGCCGCCGG
AGGGGCGGGAGGCGCCGGCGTCGGCGTCGCGCCAATGCTGCCGGCCCCCGGTGGAGGCGG
GCCGCCGGGATACATGCACATGGCGGCGATGGGAGGAGCGGTGGGCGGCGGCGGCGGCGT
CGACGGCGGCGGCGGCTCCGGGGGGAGGCGGCGGACGCGGACCAAGTTCACGGAGGAGCA
GAAGGCGCGGATGCTGCGGTTCGCGGAGCGGCTCGGGTGGCGGATGCCGAAGCGGGAGCC
CGGCCGCGCGCCCGGGGACGACGAGGTGGCGCGCTTCTGCCGGGAGATCGGCGTCAACCG
GCAGGTCTTCAAGGTGTGGATGCACAACCACAAGGCCGGCGGCGGCGGCGGCGGCGGCGG
CAGCGGCGGCCCCGGCGCCGGTGGAGGCGCCCAGACGTCGTCGTCGACGACCAGGGGCGG
CGGCGACGTCGGGGTGGGCTTGTCGCCGGCGATGGGCGGCGACGGCGAGGACGACGAGGA
GGTGAGGGGGAGCGAGATGTGCATGTAGGAGCCACGTACTTACGTAATGCAGGCAGCATT
GCAAATTTGCAATTGCATTGCTAGGGTGGGATAATTCACAATTTAATTAACTCTCTCTTT
TTTTTTGCTAATTTCTTTTATTTTTTGCTTCCCTGAGTTGATTCTTGCTGATGAGATTGA
TTGTTTTAACGGTGCCACTAATTAATTGTGTGT