Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0717900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:29064993:29067556:1 gene:Os03g0717900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ABRH7 (Fragment). (Os03t0717900-01);Similar to mRNA, clone: RTFL01-13-K15. (Os03t0717900-02)
Sequence	ATGCATCAGAGACCTCGATTGCCCAACCCAACCAACCAACCACCGCCGCGGCAGCAGAAG GATCCCCAATTTCCGCGAAAAACCCTCGAATTCGACCCGGCATCCCGGCGCGTCGGTTGT TCCCCGATGGAGGCAGCAGCAGCAGCCGCCGCGGCGCTCTTGTCGCCGCCCGCCGCCGCC GCGCCCTCGCGGCGGCCTGGGACTCCCGGTGCTACCTCGCTCCCCTTCGCCCGGAGGCGC GGTGTCGCCGCCGTCAAGGGTCTTGGACGGCAGCAGCTCACCTGCAGAAGGCGAGGCGTC GTCGTGAGGGCGGCGTCGTGGTCGCCGTCGGGGCCGGAGTCGCTGCCGCCGCCGCCGTCG TCGTCGATCGCGCCGCTCCAGATGGAGTCGCCGGTGGGGCAGTTCCTCTCGCAGATCCTG GCCACGCACCCGCACCTGCTTCCCGCCGCCGCCGAGCAGCAGCTCGAGCAGCTCCAGACC GACCGCGACGCCGCCAAGGACAACGGCGGCGACAAGCCCGCGCCGTCGGACGGCGACATC GTGCTGTACAGGCGGATTGCTGAGGTCAAGGAAAAGGAGCGCAAGAGGGCTTTGGAGGAG ATACTCTATGCACTTGTTGTCCAGAAGTTTGTTGAAGCTGGTGTTTCTTTGGTTCCAGCT CTTTCCCACTCTATCAGTTCTTCTGGAAGAGTTGATCAGTGGGCAGAATCTGTGGAAGGG AAACTTGAGAAGATGCATTCACAGGAGGCATATGAAATGATCGAGAACCACCTCGCTCTC ATCCTGGGGCAGCGGCAAGCTGATGCCACTGTTGCGGCCATAAGTAAACTCCGAGTTGGT CAGGTGTATGCTGCTTCTGTGATGTATGGTTACTTCCTTAAGAGAGTCGATCAGAGATTT CAGCTCGAGAAGTCAATGAAGACCCTCCCTTGGGGATCAGAAGAGGAAGACAAGCTCAAC CAAGTTATGACAACGGACTCAAGGCCCTCACCCCAGACTTCTACTTCACATCCAGAGATG GCATCATGGACTTCCCCTAACTTCAGTGCAGGCGGACCTAGCCAATCTGTTAAGCCATGC CGTCTTAGATCGTATGTCATGTCATTTGATTCAGAGACCCTACAAAGTTACGCAACAATC AGGTCCAAGGAGGCATTTGGCATCATCGAGAAGCACACTGAGGCACTATTTGGTAAACCA GAGATTGTAATCACACCTGAAGGCACAGTCGATTCTTCCAAGGATGAACATGTCAGGATA AGTTTCGCAGGGTTGAGAAGGCTGATCTTAGAGGCTGTTACTTTTGGATCCTTCCTTTGG GATGTTGAGAGCTTTGTGGACACCAGGTACCATTTTGTGGCCAACTAG

Peptide Sequence

PEP ID	Os03t0717900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:29064993:29067556:1 gene:Os03g0717900 transcript:Os03t0717900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ABRH7 (Fragment). (Os03t0717900-01);Similar to mRNA, clone: RTFL01-13-K15. (Os03t0717900-02)
Sequence	MHQRPRLPNPTNQPPPRQQKDPQFPRKTLEFDPASRRVGCSPMEAAAAAAAALLSPPAAA APSRRPGTPGATSLPFARRRGVAAVKGLGRQQLTCRRRGVVVRAASWSPSGPESLPPPPS SSIAPLQMESPVGQFLSQILATHPHLLPAAAEQQLEQLQTDRDAAKDNGGDKPAPSDGDI VLYRRIAEVKEKERKRALEEILYALVVQKFVEAGVSLVPALSHSISSSGRVDQWAESVEG KLEKMHSQEAYEMIENHLALILGQRQADATVAAISKLRVGQVYAASVMYGYFLKRVDQRF QLEKSMKTLPWGSEEEDKLNQVMTTDSRPSPQTSTSHPEMASWTSPNFSAGGPSQSVKPC RLRSYVMSFDSETLQSYATIRSKEAFGIIEKHTEALFGKPEIVITPEGTVDSSKDEHVRI SFAGLRRLILEAVTFGSFLWDVESFVDTRYHFVAN

Transcript Sequence

Transcript ID	Os03t0717900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29064993:29067556:1 gene:Os03g0717900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ABRH7 (Fragment). (Os03t0717900-01);Similar to mRNA, clone: RTFL01-13-K15. (Os03t0717900-02)
Sequence	ACTTGGGCCAGTCTGACCGCCGCGAGCGAGCGCGGCGGCTTCGCTATATATGCATCAGAG ACCTCGATTGCCCAACCCAACCAACCAACCACCGCCGCGGCAGCAGAAGGATCCCCAATT TCCGCGAAAAACCCTCGAATTCGACCCGGCATCCCGGCGCGTCGGTTGTTCCCCGATGGA GGCAGCAGCAGCAGCCGCCGCGGCGCTCTTGTCGCCGCCCGCCGCCGCCGCGCCCTCGCG GCGGCCTGGGACTCCCGGTGCTACCTCGCTCCCCTTCGCCCGGAGGCGCGGTGTCGCCGC CGTCAAGGGTCTTGGACGGCAGCAGCTCACCTGCAGAAGGCGAGGCGTCGTCGTGAGGGC GGCGTCGTGGTCGCCGTCGGGGCCGGAGTCGCTGCCGCCGCCGCCGTCGTCGTCGATCGC GCCGCTCCAGATGGAGTCGCCGGTGGGGCAGTTCCTCTCGCAGATCCTGGCCACGCACCC GCACCTGCTTCCCGCCGCCGCCGAGCAGCAGCTCGAGCAGCTCCAGACCGACCGCGACGC CGCCAAGGACAACGGCGGCGACAAGCCCGCGCCGTCGGACGGCGACATCGTGCTGTACAG GCGGATTGCTGAGGTCAAGGAAAAGGAGCGCAAGAGGGCTTTGGAGGAGATACTCTATGC ACTTGTTGTCCAGAAGTTTGTTGAAGCTGGTGTTTCTTTGGTTCCAGCTCTTTCCCACTC TATCAGTTCTTCTGGAAGAGTTGATCAGTGGGCAGAATCTGTGGAAGGGAAACTTGAGAA GATGCATTCACAGGAGGCATATGAAATGATCGAGAACCACCTCGCTCTCATCCTGGGGCA GCGGCAAGCTGATGCCACTGTTGCGGCCATAAGTAAACTCCGAGTTGGTCAGGTGTATGC TGCTTCTGTGATGTATGGTTACTTCCTTAAGAGAGTCGATCAGAGATTTCAGCTCGAGAA GTCAATGAAGACCCTCCCTTGGGGATCAGAAGAGGAAGACAAGCTCAACCAAGTTATGAC AACGGACTCAAGGCCCTCACCCCAGACTTCTACTTCACATCCAGAGATGGCATCATGGAC TTCCCCTAACTTCAGTGCAGGCGGACCTAGCCAATCTGTTAAGCCATGCCGTCTTAGATC GTATGTCATGTCATTTGATTCAGAGACCCTACAAAGTTACGCAACAATCAGGTCCAAGGA GGCATTTGGCATCATCGAGAAGCACACTGAGGCACTATTTGGTAAACCAGAGATTGTAAT CACACCTGAAGGCACAGTCGATTCTTCCAAGGATGAACATGTCAGGATAAGTTTCGCAGG GTTGAGAAGGCTGATCTTAGAGGCTGTTACTTTTGGATCCTTCCTTTGGGATGTTGAGAG CTTTGTGGACACCAGGTACCATTTTGTGGCCAACTAGTTGATCCTACAAAGTTTCATCCC AGATAGTGGAGATTAGTGTGTATATTTGGTCCGAAGTGTATGGGTTTCAATGAAGACTCT TTGCAAAACGAATTTCTCCTGGCTCTATGCAGATCGCAGAGATCTATGATTTTTACACAG TTTTCGGGCATATAGCTTCAATGTAAAATGGATATTTTTTTAGCCTAATGTGCAGCTGTT AGTTCCTGGTAACACTTGGGCTGCTTGGGCCTTGGGTGATGTATAATGTTTTATGACTTG ATGTCTGGAAATTGAATGAGGAATCCTAG