Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0717600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:29039345:29045538:-1 gene:Os03g0717600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type matrin domain containing protein. (Os03t0717600-01)
Sequence	ATGGCGTCGACGGTGCTGGAGGCGACGCGGGCGAAGCACGAGGACATGGAGAGGCTGGAG CGGCTGGCGGTGCGGGAGCTGCAGCGGGAGCCCGCCAACGCGCGCGACCGCCTCTACCAG TCCCACCGCGTGCGCCACATGCTCGACCTCGTCATCTCCACCTCCGGCAAGCTCGTGGAA ATCTACGAGGACAAGGATAATGCTAGGAAGGATGAGATCTCCAACCATCTTAGTTCCACA GTGCAAGCTGAAATCTTTCCAAAGTTCTATGACAGGCTCAAAGAGATCCGTGATTACCAT AGGCGTAATCCTTCTGCCCGTTTCGTTAGTGCAACTGATGATTTCGAAGAGCTACTAAAG GAGGAACCGGCTATTGAATTCACTGGAGAGGAAGCTTTTGGCCGATACCTGGACTTGCAT GAGCTTTACAATGAGTTCATAAATTCCAAGTTTGGAACTCCAATGGAATACTCAGCATAT GTTGGCACCTTTTCTCATGTGGAGAAGATGGCACAAAATCTGAAAACCTCCAGGCAATAC AGAGAATACCTGGAGCATATTTTGGAGTATCTGACATCATTTCTGTATCACACAGAACCA TTGCAAGACATTGAGAAGATTTTTGCAAAGTTGGAAAGCGAGTTTGAAGAACAGTGGATC AATGGTGAAGTGCCTGGATGGGAGAGCAAGGACCCAGAGAAAGAATCTGCACAAGAGTCA GTAATAGACCTTGATTACTATACCACTGTTGAAGAGCTTGTTGAGCTGGGCCCAGAAAAG TTGAAAGAGGCTTTAGCTGCTCGTGGATTAAAAAGTGGTGGTACTGTTCAACAGCGTGCT GAGCGACTTTTCTTGTTGAAGCATACACCCTTGGAACAATTGGATCGTAAGCATTTTGCC AAAGGTTCACACAGTTCTGTCTCCAATGCTACTTCTAATGGTAACAATTTCAAGGATAAT TTGAAGAAGGAAATTGCTTTAATGGAAGTAAAGATGAGGCGCCTTTGTGAGCTACTAGAT GAGATCATTGTACGGACAAAGGAAAATGCAGAGAAGAAGCTGACTCTCACATATGAAGAA ATGGAAGCAGAACGAGAAGAGGAAGAAGTGCAAGCTGATAGTGAAAGTGATGATGAAGAC CAACAAATCTACAATCCTCTTAAGTTGCCGATGGGTTGGGACGGCAAACCTATACCCTAT TGGCTATATAAGCTCCATGGTCTTGGTCAGGAATTCAAATGTGAGATATGTGGAAACCAC AGCTACTGGGGGCGACGGGCTTATGAGCGGCATTTCAAGGAGTGGCGCCATCAGCACGGG ATGCGCTGTCTTGGAATTCCTAATACTAAGAACTTCAATGAAATCACATCCATCCAGGAG GCAAAAGAACTCTGGGAGAAAATTCAACAACGACAAGGGCTGAACAAGTGGCGGCCAGAC CTAGAAGAAGAGTACGAAGATCAGGAGGGAAATATCTACAACAAGAAGACCTACACTGAT CTGCAGCGCCAGGGCCTGATTTAG

Peptide Sequence

PEP ID	Os03t0717600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:29039345:29045538:-1 gene:Os03g0717600 transcript:Os03t0717600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type matrin domain containing protein. (Os03t0717600-01)
Sequence	MASTVLEATRAKHEDMERLERLAVRELQREPANARDRLYQSHRVRHMLDLVISTSGKLVE IYEDKDNARKDEISNHLSSTVQAEIFPKFYDRLKEIRDYHRRNPSARFVSATDDFEELLK EEPAIEFTGEEAFGRYLDLHELYNEFINSKFGTPMEYSAYVGTFSHVEKMAQNLKTSRQY REYLEHILEYLTSFLYHTEPLQDIEKIFAKLESEFEEQWINGEVPGWESKDPEKESAQES VIDLDYYTTVEELVELGPEKLKEALAARGLKSGGTVQQRAERLFLLKHTPLEQLDRKHFA KGSHSSVSNATSNGNNFKDNLKKEIALMEVKMRRLCELLDEIIVRTKENAEKKLTLTYEE MEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNH SYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAKELWEKIQQRQGLNKWRPD LEEEYEDQEGNIYNKKTYTDLQRQGLI

Transcript Sequence

Transcript ID	Os03t0717600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:29039345:29045538:-1 gene:Os03g0717600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type matrin domain containing protein. (Os03t0717600-01)
Sequence	TAGCCTCCTACACTTACCGTCACCGACCGCGAAAAAATTCCCCCAAAACCCTAGCGGCGG CGGCGCGCGCTCCCCTCCCCACCTCCGCCGCCGCGGCGTCGAGGCAGCACCGGAGGGCGA TGGCGTCGACGGTGCTGGAGGCGACGCGGGCGAAGCACGAGGACATGGAGAGGCTGGAGC GGCTGGCGGTGCGGGAGCTGCAGCGGGAGCCCGCCAACGCGCGCGACCGCCTCTACCAGT CCCACCGCGTGCGCCACATGCTCGACCTCGTCATCTCCACCTCCGGCAAGCTCGTGGAAA TCTACGAGGACAAGGATAATGCTAGGAAGGATGAGATCTCCAACCATCTTAGTTCCACAG TGCAAGCTGAAATCTTTCCAAAGTTCTATGACAGGCTCAAAGAGATCCGTGATTACCATA GGCGTAATCCTTCTGCCCGTTTCGTTAGTGCAACTGATGATTTCGAAGAGCTACTAAAGG AGGAACCGGCTATTGAATTCACTGGAGAGGAAGCTTTTGGCCGATACCTGGACTTGCATG AGCTTTACAATGAGTTCATAAATTCCAAGTTTGGAACTCCAATGGAATACTCAGCATATG TTGGCACCTTTTCTCATGTGGAGAAGATGGCACAAAATCTGAAAACCTCCAGGCAATACA GAGAATACCTGGAGCATATTTTGGAGTATCTGACATCATTTCTGTATCACACAGAACCAT TGCAAGACATTGAGAAGATTTTTGCAAAGTTGGAAAGCGAGTTTGAAGAACAGTGGATCA ATGGTGAAGTGCCTGGATGGGAGAGCAAGGACCCAGAGAAAGAATCTGCACAAGAGTCAG TAATAGACCTTGATTACTATACCACTGTTGAAGAGCTTGTTGAGCTGGGCCCAGAAAAGT TGAAAGAGGCTTTAGCTGCTCGTGGATTAAAAAGTGGTGGTACTGTTCAACAGCGTGCTG AGCGACTTTTCTTGTTGAAGCATACACCCTTGGAACAATTGGATCGTAAGCATTTTGCCA AAGGTTCACACAGTTCTGTCTCCAATGCTACTTCTAATGGTAACAATTTCAAGGATAATT TGAAGAAGGAAATTGCTTTAATGGAAGTAAAGATGAGGCGCCTTTGTGAGCTACTAGATG AGATCATTGTACGGACAAAGGAAAATGCAGAGAAGAAGCTGACTCTCACATATGAAGAAA TGGAAGCAGAACGAGAAGAGGAAGAAGTGCAAGCTGATAGTGAAAGTGATGATGAAGACC AACAAATCTACAATCCTCTTAAGTTGCCGATGGGTTGGGACGGCAAACCTATACCCTATT GGCTATATAAGCTCCATGGTCTTGGTCAGGAATTCAAATGTGAGATATGTGGAAACCACA GCTACTGGGGGCGACGGGCTTATGAGCGGCATTTCAAGGAGTGGCGCCATCAGCACGGGA TGCGCTGTCTTGGAATTCCTAATACTAAGAACTTCAATGAAATCACATCCATCCAGGAGG CAAAAGAACTCTGGGAGAAAATTCAACAACGACAAGGGCTGAACAAGTGGCGGCCAGACC TAGAAGAAGAGTACGAAGATCAGGAGGGAAATATCTACAACAAGAAGACCTACACTGATC TGCAGCGCCAGGGCCTGATTTAGAATCCCTGATGCGATCCTAACATTTTGGCCCCTATGG GCTGCTGCTGAAGTGGTTGGCCATTTGTTCTATTGAACTTCGTTGACCTCTGGGTAGTTG TAGCACTCGATACTTGTAGCACCATGGGTACTCCATTGCTCAAATGTTTCTTTTCTACTA CATGGTATATTGCACTATATCCCTGTACCCTGTTTGACCATCTGGTATACTGTTTGCACA ATCCAGGGTTAAATCGCCATTGTGTCGG