Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0716200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:28988409:28991862:-1 gene:Os03g0716200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os03t0716200-01)
Sequence	ATGCCGTCCATGCGCGCGCTCGAGCGGCTCGCCTCGTGGCCGACGCCCCCGCCGCCACCT CCGCCGCCGCCGCCGCCGGCGAAGGCGGCGGCGGCGGAGGCGGAGAGGCCGTGTCCGCCG TCGTCCGCCGCCACCACCTCGTCGTCGTCTTCTTCCTCGGCCTCGGCCGCGCCCGCGGCG GCGGGGGCGCCGCGCGTCTACCCGCTGCGGGACTTCCCGGGGAGGGAGGCGGCGGGGCTG GGCGGCGCGTTCCGGGACAACGTGCGGTGGCTGCTGAGGCAGTGGGGCGGCGCCTCCCCC GCCTCCCCCGCCGCCGGGGGTCCTGGGTCGGCGTCGGCGGCGGTGGCGGTGGCGTGGCGG GTGCTCCTCTCCGACGACCGCACCGGCGTCGTCGTCCCCATCTTCGCCGTCGAGGAGCCC GTCGCGTCCTCGCCCAAGCCGCTCTGCGATTACTGCCGCTGGGCGGGTTGGAGCCACCAT TGGGTGTCAAAGCGGAAGTACCATTTCATTATTCCGGCGCCCGCTGACTGGGACCGCCAG CTTGCTGCTGATGTGATCCTTGGACGCACCGACCACCTCCTCCATGGCCTGATCCACAGC AATGGTTTTGGTCACCTTGTCATGCTCCGTGGTCGCGATGGCGGCTCCACTGCACTATCT GGCCGTGACATCATGGACATCTGGGATTGCCTCTGCTCCGCTCTTCGTGCCAGGGCTGTG TCTGTGGTGGACTTTTCCCAGAAACGCTCTCTGGATCTTCGTCTCCTGCTCAGCGTGGCA CATGGTGACACATGGTTCACCCGATGGGGATACTGCCTTGCAAGGGGTTGCTTCTGTGTG TCTACCTCGACCTATGCAGCTTCCGTGGAAGCGTTGGCTGCCCTGCCTGTGGACTATCTT CGCAGCCGTCACGTCCGCCGTGTGGTAACCATTTACCGCCGCCTATCCAACAAACCTCTG GTTACAGTCCGTGAGTTCCTCCGCTGCCTCCTTGATTGGAAGCACCTTGAGCCACCCCTT CAATTACCTCCTGTGAAGACATGCACACGGCTGCAATTCATGCTGCCAAAGCCATCTGTG ATGAAGAGACACAGGCAGCAGCCATGCCAGCGCTTTGAGGATGTGATTGACCTGCTCCAG TGTCGCTGGTCCAAGAAGCGGCTTCTTGATGCTGCAGAGGTTGTTGTTGACAGGCTGCTA GAGCATGGCAGCGGGGCAGAGATGACACGGCAGGCGGTGCGAGATGCTGCAAGGGGCGCC ATTGGTGATACTGGTCTCCTTGACTTTGTCATCAAGTCCCTTGGTGATACCATTGTTGGC AACTATATTGTGCGACGTGTGCCTGATGCTGAAACACGTGTGCTTCACTTTAGCCTTGAG GAATATGAAGAGCCAACACCAGCACTGTTGGATGTTGAGGTAGAGTGCACACCATTGCCA CCTGTGGTACGGTGGCCTAGCACAGTGGAAGTAGAGCGAGATCTGCGTGCTGTCTACCGA GCAATGGTCGAGGTGCGCAGTGAGGCAGCACAGGCTGTGCTGGACTGCAAGCACTGGGTG AAGTGGTGGGGCCTTGGGGATGAGTCCGATGACCAGCTGAGGTTTTTCGTTGAGTGGCAA CCCCAGCCATGGGAAGCTGCTGAGCTTATACGGCCAATGCCACTGGGGGAGATTGTGGTG GTACCACTCCATGCATCCATGGGTGAGCTTCTTGTCGAGTCAGAGCATGCGCTGCGGGAC ACTTACTACTTCTTTGAGGAATTCCAGGCTGAAGGGCTGCATGGCATTGCTGGGGAGAAA TGGGATCCAGTGATGCTTGGTGGGGCAGAGAATGGTGACACAATCAGCGTGTATGGCAAT GGGGCAGACATGGAAACTGAGCTGCGGTGCCATGGTGGACTTGACTTGTGGGAGGTGCGG TGCGTGTGTGGTGCGCAGGATGATGATGGTGAGCGCATGATAGCATGCGATGCTTGCGAT GTATGGCACCACACACGTTGCGTGGGCATTGCAGACAGCGAGCCTGTGCCACCATTATTT CTTTGTGTGCTCTGCGGTGGTGCGCTCATGGCGGCTGGACCGATCAATTCTTGA

Peptide Sequence

PEP ID	Os03t0716200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:28988409:28991862:-1 gene:Os03g0716200 transcript:Os03t0716200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os03t0716200-01)
Sequence	MPSMRALERLASWPTPPPPPPPPPPPAKAAAAEAERPCPPSSAATTSSSSSSSASAAPAA AGAPRVYPLRDFPGREAAGLGGAFRDNVRWLLRQWGGASPASPAAGGPGSASAAVAVAWR VLLSDDRTGVVVPIFAVEEPVASSPKPLCDYCRWAGWSHHWVSKRKYHFIIPAPADWDRQ LAADVILGRTDHLLHGLIHSNGFGHLVMLRGRDGGSTALSGRDIMDIWDCLCSALRARAV SVVDFSQKRSLDLRLLLSVAHGDTWFTRWGYCLARGCFCVSTSTYAASVEALAALPVDYL RSRHVRRVVTIYRRLSNKPLVTVREFLRCLLDWKHLEPPLQLPPVKTCTRLQFMLPKPSV MKRHRQQPCQRFEDVIDLLQCRWSKKRLLDAAEVVVDRLLEHGSGAEMTRQAVRDAARGA IGDTGLLDFVIKSLGDTIVGNYIVRRVPDAETRVLHFSLEEYEEPTPALLDVEVECTPLP PVVRWPSTVEVERDLRAVYRAMVEVRSEAAQAVLDCKHWVKWWGLGDESDDQLRFFVEWQ PQPWEAAELIRPMPLGEIVVVPLHASMGELLVESEHALRDTYYFFEEFQAEGLHGIAGEK WDPVMLGGAENGDTISVYGNGADMETELRCHGGLDLWEVRCVCGAQDDDGERMIACDACD VWHHTRCVGIADSEPVPPLFLCVLCGGALMAAGPINS

Transcript Sequence

Transcript ID	Os03t0716200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:28988409:28991862:-1 gene:Os03g0716200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os03t0716200-01)
Sequence	AAGGAGAGCCCAGGGCAATGCCGTCCATGCGCGCGCTCGAGCGGCTCGCCTCGTGGCCGA CGCCCCCGCCGCCACCTCCGCCGCCGCCGCCGCCGGCGAAGGCGGCGGCGGCGGAGGCGG AGAGGCCGTGTCCGCCGTCGTCCGCCGCCACCACCTCGTCGTCGTCTTCTTCCTCGGCCT CGGCCGCGCCCGCGGCGGCGGGGGCGCCGCGCGTCTACCCGCTGCGGGACTTCCCGGGGA GGGAGGCGGCGGGGCTGGGCGGCGCGTTCCGGGACAACGTGCGGTGGCTGCTGAGGCAGT GGGGCGGCGCCTCCCCCGCCTCCCCCGCCGCCGGGGGTCCTGGGTCGGCGTCGGCGGCGG TGGCGGTGGCGTGGCGGGTGCTCCTCTCCGACGACCGCACCGGCGTCGTCGTCCCCATCT TCGCCGTCGAGGAGCCCGTCGCGTCCTCGCCCAAGCCGCTCTGCGATTACTGCCGCTGGG CGGGTTGGAGCCACCATTGGGTGTCAAAGCGGAAGTACCATTTCATTATTCCGGCGCCCG CTGACTGGGACCGCCAGCTTGCTGCTGATGTGATCCTTGGACGCACCGACCACCTCCTCC ATGGCCTGATCCACAGCAATGGTTTTGGTCACCTTGTCATGCTCCGTGGTCGCGATGGCG GCTCCACTGCACTATCTGGCCGTGACATCATGGACATCTGGGATTGCCTCTGCTCCGCTC TTCGTGCCAGGGCTGTGTCTGTGGTGGACTTTTCCCAGAAACGCTCTCTGGATCTTCGTC TCCTGCTCAGCGTGGCACATGGTGACACATGGTTCACCCGATGGGGATACTGCCTTGCAA GGGGTTGCTTCTGTGTGTCTACCTCGACCTATGCAGCTTCCGTGGAAGCGTTGGCTGCCC TGCCTGTGGACTATCTTCGCAGCCGTCACGTCCGCCGTGTGGTAACCATTTACCGCCGCC TATCCAACAAACCTCTGGTTACAGTCCGTGAGTTCCTCCGCTGCCTCCTTGATTGGAAGC ACCTTGAGCCACCCCTTCAATTACCTCCTGTGAAGACATGCACACGGCTGCAATTCATGC TGCCAAAGCCATCTGTGATGAAGAGACACAGGCAGCAGCCATGCCAGCGCTTTGAGGATG TGATTGACCTGCTCCAGTGTCGCTGGTCCAAGAAGCGGCTTCTTGATGCTGCAGAGGTTG TTGTTGACAGGCTGCTAGAGCATGGCAGCGGGGCAGAGATGACACGGCAGGCGGTGCGAG ATGCTGCAAGGGGCGCCATTGGTGATACTGGTCTCCTTGACTTTGTCATCAAGTCCCTTG GTGATACCATTGTTGGCAACTATATTGTGCGACGTGTGCCTGATGCTGAAACACGTGTGC TTCACTTTAGCCTTGAGGAATATGAAGAGCCAACACCAGCACTGTTGGATGTTGAGGTAG AGTGCACACCATTGCCACCTGTGGTACGGTGGCCTAGCACAGTGGAAGTAGAGCGAGATC TGCGTGCTGTCTACCGAGCAATGGTCGAGGTGCGCAGTGAGGCAGCACAGGCTGTGCTGG ACTGCAAGCACTGGGTGAAGTGGTGGGGCCTTGGGGATGAGTCCGATGACCAGCTGAGGT TTTTCGTTGAGTGGCAACCCCAGCCATGGGAAGCTGCTGAGCTTATACGGCCAATGCCAC TGGGGGAGATTGTGGTGGTACCACTCCATGCATCCATGGGTGAGCTTCTTGTCGAGTCAG AGCATGCGCTGCGGGACACTTACTACTTCTTTGAGGAATTCCAGGCTGAAGGGCTGCATG GCATTGCTGGGGAGAAATGGGATCCAGTGATGCTTGGTGGGGCAGAGAATGGTGACACAA TCAGCGTGTATGGCAATGGGGCAGACATGGAAACTGAGCTGCGGTGCCATGGTGGACTTG ACTTGTGGGAGGTGCGGTGCGTGTGTGGTGCGCAGGATGATGATGGTGAGCGCATGATAG CATGCGATGCTTGCGATGTATGGCACCACACACGTTGCGTGGGCATTGCAGACAGCGAGC CTGTGCCACCATTATTTCTTTGTGTGCTCTGCGGTGGTGCGCTCATGGCGGCTGGACCGA TCAATTCTTGAAGAGGCACTAACGCTACCTGAAAGCCAAGTGACTATTCTATTCTTTTCC CCTTTCTTACTTCCCTTCGGTTCATATTTCCAGTGACGATAGTCTGACGAGGTAAACTTA GTTCTGAAACTGCAACTTATGGTGTAAAGTGCGTTGTTTTGGCAGTATGTAGTAACTTCT AATGCTGTGTAGTAAGTAGTAGATGGGAAGCGGGTTTAGACAGTAGACTTGGGGAAGCCC TATCCATGTCGTTAGCAATTCGACTGGAAATTTTGTACCTGATACACTACAGAAGATGAT ATAGCTAGATGTAAATACATGTTCTGTGATTGTATCTTTTACGGCCTCCCAGTCCCAATT GGTGAAGCTATACAGTGTAATTTTTTGTGCTAGGTATACAATGTAATTTAGCATCAGCAA TGACAAAACTGTATCTTTCTTC