Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0713000-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:28839277:28844785:1 gene:Os03g0713000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast threonine deaminase 1. (Os03t0713000-00)
Sequence	ATGGCGGCCGCCGCCACCGCCGCGGCCGCGGCCACCTCCACCTTCACCGCCGCCGTGCCG CGCGCGCGCGGGCGCAGGCATCCAACGCGCGTGGCGGCGGCGGCGGCGGCGACGGCGTCG TCACCGGAGGCGGCGATGGCGGCGGCGGCGCCGCCGTTGCCGATGATGCGGGTGGCGCCC GAGACGCTGCAGCGGCAGAGCGGGTACCTCGTGCGGGGCCGCGGGGAGGAGGGGATTGGG GAGGGGGAGGCGGAGGCGGTGGGAGGGGACGCGGCGGGAGGGCTCGGCGCGATGGAGTAC CTGACCAGCGTGCTCTCGTCCAAGGTGTACGACGTCGCCATCGAGTCGCCGCTCCAGCTC GCCACCAAGCTCTCCGAGCGCCTCGGCGTCAACTTGTGGATCAAGCGCGAGGACCTGCAG CCCGTATTCTCATTCAAGTTGAGAGGAGCATACAATATGATGGCAAAGCTCTCGCGTGAA CAGTTGGAGAGGGGTGTCATCTGCTCCTCTGCTGGGAACCATGCCCAGGGAGTGGCCCTT TCCGCTCAAAGACTCGGTTGCGATGCTGTTATTGTCATGCCTGTGACAACGCCTGAAATC AAGTGGCGATCGGTGGAGAGATTGGGTGCAACAGTTGTACTCAAAGGGGACTCATATGAT GAAGCTCAATCATATGCAAAACAAAGATGCGAGCAGGAAGGCCGCACATTCATACCTCCT TTTGACCATCCTGATGTTATAAGTGGACAAGGAACGATTGGCATGGAAATTGTTCGGCAG TTGCAAGGCCCACTTCATGCCATATTTGTACCTGTAGGAGGAGGTGGATTAATTGCTGGG ATCGCTGCCTATGTAAAAAGGGTTCGCCCAGAGGTGAAAATAATTGGAGTGGAGCCATCA GATGCAAATGCAATGGCATTGTCCTTGTGTCATGGTCAAAGGGTCATGCTGGAGCAAGTT GGTGGGTTTGCTGATGGTGTGGCTGTCAAAGTTGTAGGGGAGGAAACATTTCGCTTGTGC CGGGAACTTGTAGATGGTATTGTTCTTGTCAGTCGAGATGCTATTTGTGCTTCAATAAAG GATATGTTTGAGGAGAAAAGAAGCATACTTGAACCTGCTGGTGCCCTTGCGCTGGCAGGA GCTGAAGCTTACTGCAAATACTATGGCTTGAAAGGGGAAAATGTTGTTGCAATAACTAGT GGAGCAAATATGAACTTTGATCGGCTCAGATTAGTAACTGAGCTGGCTGATGTTGGTCGA AAACGAGAAGCAGTTCTTGCCACATTTTTGCCAGAGGAGCAGGGAAGCTTCAAAAAGTTT GCAGAGCTGGTTGGCCGGATGAATATTACTGAATTCAAATACAGATACGATTGCAATGCA AAAGATGCCCTTGTCCTTTACAGTGTTGGCATCTACACTGACGATGAACTTAAAGCAATG GTGGAACGTATGGAATCTTCAAAATTGAGAACTGTTGATCTTACTGACAATGATTTGGCA AAGGATCATCTAAGATACTTTATTGGTGGCAGGTCAGAAGTAACAGATGAACTTGTTTAC CGGTTCATTTTCCCAGAAAGGCCTGGTGCACTTATGAAATTTTTGGATGCATTCAGCCCC CGCTGGAATATCAGCCTTTTCCATTACCGTGCACAGGGTGAAACCGGAGCGAATGTTTTG GTTGGCATACAAGTGCCGCCGGAGGAGTTTGACGAATTCAAGAGCCGTGCTGACAATCTT GGGTACGAGTACATGTCGGAGCAGAACAACGAGATATACCGGCTCCTCTTGCGCGATCCG AAGATCTAA

Peptide Sequence

PEP ID	Os03t0713000-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:28839277:28844785:1 gene:Os03g0713000 transcript:Os03t0713000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast threonine deaminase 1. (Os03t0713000-00)
Sequence	MAAAATAAAAATSTFTAAVPRARGRRHPTRVAAAAAATASSPEAAMAAAAPPLPMMRVAP ETLQRQSGYLVRGRGEEGIGEGEAEAVGGDAAGGLGAMEYLTSVLSSKVYDVAIESPLQL ATKLSERLGVNLWIKREDLQPVFSFKLRGAYNMMAKLSREQLERGVICSSAGNHAQGVAL SAQRLGCDAVIVMPVTTPEIKWRSVERLGATVVLKGDSYDEAQSYAKQRCEQEGRTFIPP FDHPDVISGQGTIGMEIVRQLQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKIIGVEPS DANAMALSLCHGQRVMLEQVGGFADGVAVKVVGEETFRLCRELVDGIVLVSRDAICASIK DMFEEKRSILEPAGALALAGAEAYCKYYGLKGENVVAITSGANMNFDRLRLVTELADVGR KREAVLATFLPEEQGSFKKFAELVGRMNITEFKYRYDCNAKDALVLYSVGIYTDDELKAM VERMESSKLRTVDLTDNDLAKDHLRYFIGGRSEVTDELVYRFIFPERPGALMKFLDAFSP RWNISLFHYRAQGETGANVLVGIQVPPEEFDEFKSRADNLGYEYMSEQNNEIYRLLLRDP KI

Transcript Sequence

Transcript ID	Os03t0713000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:28839277:28844785:1 gene:Os03g0713000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast threonine deaminase 1. (Os03t0713000-00)
Sequence	ATGGCGGCCGCCGCCACCGCCGCGGCCGCGGCCACCTCCACCTTCACCGCCGCCGTGCCG CGCGCGCGCGGGCGCAGGCATCCAACGCGCGTGGCGGCGGCGGCGGCGGCGACGGCGTCG TCACCGGAGGCGGCGATGGCGGCGGCGGCGCCGCCGTTGCCGATGATGCGGGTGGCGCCC GAGACGCTGCAGCGGCAGAGCGGGTACCTCGTGCGGGGCCGCGGGGAGGAGGGGATTGGG GAGGGGGAGGCGGAGGCGGTGGGAGGGGACGCGGCGGGAGGGCTCGGCGCGATGGAGTAC CTGACCAGCGTGCTCTCGTCCAAGGTGTACGACGTCGCCATCGAGTCGCCGCTCCAGCTC GCCACCAAGCTCTCCGAGCGCCTCGGCGTCAACTTGTGGATCAAGCGCGAGGACCTGCAG CCCGTATTCTCATTCAAGTTGAGAGGAGCATACAATATGATGGCAAAGCTCTCGCGTGAA CAGTTGGAGAGGGGTGTCATCTGCTCCTCTGCTGGGAACCATGCCCAGGGAGTGGCCCTT TCCGCTCAAAGACTCGGTTGCGATGCTGTTATTGTCATGCCTGTGACAACGCCTGAAATC AAGTGGCGATCGGTGGAGAGATTGGGTGCAACAGTTGTACTCAAAGGGGACTCATATGAT GAAGCTCAATCATATGCAAAACAAAGATGCGAGCAGGAAGGCCGCACATTCATACCTCCT TTTGACCATCCTGATGTTATAAGTGGACAAGGAACGATTGGCATGGAAATTGTTCGGCAG TTGCAAGGCCCACTTCATGCCATATTTGTACCTGTAGGAGGAGGTGGATTAATTGCTGGG ATCGCTGCCTATGTAAAAAGGGTTCGCCCAGAGGTGAAAATAATTGGAGTGGAGCCATCA GATGCAAATGCAATGGCATTGTCCTTGTGTCATGGTCAAAGGGTCATGCTGGAGCAAGTT GGTGGGTTTGCTGATGGTGTGGCTGTCAAAGTTGTAGGGGAGGAAACATTTCGCTTGTGC CGGGAACTTGTAGATGGTATTGTTCTTGTCAGTCGAGATGCTATTTGTGCTTCAATAAAG GATATGTTTGAGGAGAAAAGAAGCATACTTGAACCTGCTGGTGCCCTTGCGCTGGCAGGA GCTGAAGCTTACTGCAAATACTATGGCTTGAAAGGGGAAAATGTTGTTGCAATAACTAGT GGAGCAAATATGAACTTTGATCGGCTCAGATTAGTAACTGAGCTGGCTGATGTTGGTCGA AAACGAGAAGCAGTTCTTGCCACATTTTTGCCAGAGGAGCAGGGAAGCTTCAAAAAGTTT GCAGAGCTGGTTGGCCGGATGAATATTACTGAATTCAAATACAGATACGATTGCAATGCA AAAGATGCCCTTGTCCTTTACAGTGTTGGCATCTACACTGACGATGAACTTAAAGCAATG GTGGAACGTATGGAATCTTCAAAATTGAGAACTGTTGATCTTACTGACAATGATTTGGCA AAGGATCATCTAAGATACTTTATTGGTGGCAGGTCAGAAGTAACAGATGAACTTGTTTAC CGGTTCATTTTCCCAGAAAGGCCTGGTGCACTTATGAAATTTTTGGATGCATTCAGCCCC CGCTGGAATATCAGCCTTTTCCATTACCGTGCACAGGGTGAAACCGGAGCGAATGTTTTG GTTGGCATACAAGTGCCGCCGGAGGAGTTTGACGAATTCAAGAGCCGTGCTGACAATCTT GGGTACGAGTACATGTCGGAGCAGAACAACGAGATATACCGGCTCCTCTTGCGCGATCCG AAGATCTAATGCCACTGACTCGAATCAAAACCGGACCGACTGTTAAAGTTCCTTTGCTCC CATAAGTTGGTGAGGCTTACCAAGATCGATCCATTCAGGTAGTAGGGTCATTTGCTTCAT CTTTTGGAATAAAGGCGTCGCCTCATCTATTTATGTACTCCAGAATTTTGGGTGTGCCAT TTGTTGATGTGTTGAGTATGTAATGTAATGTATGTGTTGTACTT