Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0711400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:28719395:28724712:-1 gene:Os03g0711400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-84 description:Similar to Coatomer alpha subunit. (Os03t0711400-01);Similar to cDNA clone:J023075G08, full insert sequence. (Os03t0711400-02)
Sequence	ATGCTGACCAAGTTCGAGACGAAGAGCAACCGGGTGAAGGGGCTGAGCTTCCACCCGCGG CGGCCATGGATCCTGGCCAGCCTCCACAGCGGGGTGATCCAGATGTGGGACTACCGCATG GGCACCCTCCTCGACCGCTTCGACGAGCACGACGGCCCCGTCCGCGGCGTCCACTTCCAC GCCACGCAGCCGCTCTTCGTCTCCGGAGGTGATGATTACAAGATTAAGGTGTGGAATTAC AAGACACACCGCTGCCTCTTCACACTTCACGGGCACCTTGACTATATTCGCACCGTGCAA TTCCACCACGAATACCCATGGATAGTAAGTGCTAGTGATGACCAGACAATCCGGATCTGG AACTGGCAGTCACGCACATGTGTAGCTGTGCTGACTGGACATAACCACTATGTCATGTGC GCATCATTCCATCCCAAGGAGGACCTGGTTGTGTCAGCATCACTGGATCAGACTGTCCGT GTTTGGGATATTGGTGCTTTGAGGAAGAAGACGGTGTCACCTGCAGATGACATCCTGCGT CTCACCCAGATGAACACAGATCTGTTTGGAGGTGTTGATGCAGTTGTAAAATATGTGTTG GAAGGGCATGACCGTGGGGTGAACTGGGCATCATTTCACCCCACATTGCCACTCATTGTT TCCGGGGCAGATGACCGACAAGTGAAGCTATGGAGAATGAATGACACGAAGGCTTGGGAA GTTGATACTTTGCGGGGACACATGAATAATGTGTCATGCGTGATGTTCCATGCTAAGCAA GACATCATTGTGTCCAACTCAGAGGACAAAAGCATTCGCATCTGGGATGCCACAAAGCGA ACCGGTATTCAAACGTTCAGGCGGGAACATGATCGTTTCTGGATTCTTTCTGCTCACCCT GAGATGAATCTTCTTGCCGCTGGTCATGACAGTGGTATGATTGTGTTTAAATTGGAGAGG GAACGTCCAGCTTTCTCTGTGAGTGGAGATACTGTTTTCTATGTGAAGGACCGTTTTCTT CGTTTTTTTGAATTCACCACACAGAAGGAAGTTCAGCTTGCTCCAATAAGAAGACCTGGA TCAGTGAGCTTGAACCAGTCACCCAAGACACTATCTTACAGTCCAACTGAAAATGCTGTC CTGATTTGCTCTGATGTGGATGGAGGCTCATACGAACTCTACATTGTTCCCAAGGATTCT GCTGGCAGGGCTGACTATTTGCAGGATGCAAAGAAGGGAGCTGGTGGGTCAGCTGTTTTC GTGGCACGCAACAGGTTTGCAGTCCTTGAGAAGAGTAGCAATCAAGTTTTGGTGAAGAAT CTTAAGAATGAAATCGTAAAGAAAAGCCCTCTTCCTATTGCCACGGATGCAATTTATTAT GCTGGGACTGGTAACTTGCTGTGCAAAGCCGAAGACCGAGTGACCATCTTTGATCTGCAG CAAAGGTTAATTCTTGGTGAGCTCCAGGCACCTTCTGTTAAATATGTTGTTTGGTCTAGT GATATGGAATCTGTCGCACTGCTGAGCAAGCATGCAGTGGTTATAGCAAACAAGAAGCTC GTCCATCGCTGTACACTGCACGAAACCATTCGTGTGAAAAGTGGTGCCTGGGATGAGAAT GGTGTGTTTATTTACACTACCCTGAATCATATCAAGTATTGCCTTCCCAATGGAGATAGT GGGATTATTAAAACCCTCGATGTTCCTATATACATAACAAGGGTTATTGGGAACAATATA TTCTGTCTAGATCGTGATGGTAAGAACAAGCTGGTCACAGTTGATGCATCTGAGTACATT TTCAAGCTGGCCCTTCTACGCAAACGGTATGATCATGTGATGAGTATGATCAAGAATTCC CAGCTGTGTGGGCAAGCTGTGATTTCTTATTTACAACAGAAAGGCTTTCCAGAAGTTGCC CTCCACTTTGTGAAAGATGAGAAGACAAGATTTAACCTTGCTCTTGAGAGTGGTAACATC CAAATCGCAGTTGCTTCTGCAAAAGAGATTGATGACAAGGATCACTGGTACAGGTTGGGA ATTGAGGCCCTGAGGCAGGGAAATGTTGGTATTGTGGAATATGCATACCAACGTACGAAG AATTTTGAGAGGCTTGCTTTCCTATATCTTATTACTGGTTACATGGACAAGGTGGGTTTC ATGTGCAAAATTGCTGGACAGAACAATAACCTGATGGGTCAATTCCACAATGCTCTGTAT CTTGGTGATGCGTTGAAGAGAGTTGAGATCCTAGAGAATGCTGGACAGCTACCTCTTGCT TATATTACTGCTACCACCCATGGGCTCACAGAAATTGCTGATAGGCTTGCCGCTGAGCTG GGTGAAAATATTCCTTCTCTTCCTGAAGGAAAAGCTCGCTCTCTTTTGATCCCCCCTGCT CCTCTTACAGCCAGTGGTGATTGGCCATTGCTTAGGGTGATGCATGGTATCTTTGAGGGT GGACTGGATGCTACTGGGAAGGCTGAACTTGAGGAAGACGATGAAGCTGCTGGTGCTGAC TGGGGTGATGAGGACCTGGATATGGTTGATGCAAGCGAAGCGATGGCAAATGGTGGTGAC GGTTTTGATGCTGAGGAGGGTGAAGCAAATGAGGAGGATGGCGAGGAAGGTGGTTGGGAC CTAGAAGATCTGGAACTTCCGCCTGAAGCAGAGACCCCTAAAAATGCTGGCAATGCACGC TCAGCGGTCTTCGTTGCTCCTCCACCAGGCATGCCTGTCAGCCTGATTTGGACTCAGAAA TCTTCTCTTGCTGGGGAGCATGCCGCAGCAGGGAACTTTGACACTGCAATGAGGTTGCTT AGCCGCCAGTTGGGCATAAAAAACTTTGCTCCCCTCAAGCCCCTGTTTGTTGATCTGCAC ATGGGCAGCCACTCATATCTTCGTGCACTTGCAACTGCCCCCATAATACCAATCGCTGTT GAGAAAGGTTGGAGCGAGTCTGCAAGTCCTAACGTGAGAGGCCCTCCTGCACTTGTTTTC ACCTTCCCACAAATGGAAGACAGACTCAAGGCTGCCTATAAGGCCACCACAGATGGTAAG TTCCCAGAAGCCCTGAGGCAGTTCCTTAGCATCTTGCATACCATCCCTCTTATCGTGGTA GACTCGAGGAGGGAAGTGGATGAAGTGAAAGAGTTGATCGAGATTGTGAGGGAGTATGTT CTTGGCCTGAGGATGGAACTTAAGAGGAAGGAGCTGAGAGATGATGTCAACCGCCAACAA GAATTGGCGGCTTACTTCACTAACTGCAAGCTTCAGAGAGTTCATATGAGGCTTGTGCTT GGAAGCGCTATGGGTCTGTGCTACAAGCAAAAGAACTTCGCTACTGCAGAGCACTTTGCA AGGATGCTTCTGGAGAACAACCCTAATGAGGCCCAAGCAAGGAGGGCTCGACAGGTGCAG CAGCAGTGCAGTGGCAAGAAGGATAGCTCTGAGCTGAACTATGACTACAGAAATCCATTT GTTGTCTGTGGCGCCACGTATGTTCCAATCTACCGTGGCCAGAAGGATGTTTCCTGCCCG TACTGTGGCTCCCGGTTTGTTCCTTCGATCGAAGGGCAGCTTTGTACCATATGTGAGCTT GCCGTGGTTGGTGCAGATGCTTCAGGCCTCCTCTGCTCCCCTACGCAGTCGAGATAA

Peptide Sequence

PEP ID	Os03t0711400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:28719395:28724712:-1 gene:Os03g0711400 transcript:Os03t0711400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-84 description:Similar to Coatomer alpha subunit. (Os03t0711400-01);Similar to cDNA clone:J023075G08, full insert sequence. (Os03t0711400-02)
Sequence	MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHP EMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPG SVSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVF VARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQ QRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYI FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGF MCKIAGQNNNLMGQFHNALYLGDALKRVEILENAGQLPLAYITATTHGLTEIADRLAAEL GENIPSLPEGKARSLLIPPAPLTASGDWPLLRVMHGIFEGGLDATGKAELEEDDEAAGAD WGDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEGGWDLEDLELPPEAETPKNAGNAR SAVFVAPPPGMPVSLIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFVDLH MGSHSYLRALATAPIIPIAVEKGWSESASPNVRGPPALVFTFPQMEDRLKAAYKATTDGK FPEALRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQ ELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNEAQARRARQVQ QQCSGKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICEL AVVGADASGLLCSPTQSR

Transcript Sequence

Transcript ID	Os03t0711400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:28719395:28724712:-1 gene:Os03g0711400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-84 description:Similar to Coatomer alpha subunit. (Os03t0711400-01);Similar to cDNA clone:J023075G08, full insert sequence. (Os03t0711400-02)
Sequence	ACCCCGAGATCTCAAAAACACCTTCGTCCTCTCCACCCAACGCCATACCACCCCCCCTCC CCCCTCTCTCTCCTCCGCGCGCCTCAGCGGCGAGGGGTTTCGCCGCCGCCGCCGCCGTCG CGCCGGGGGGACGGCTAGAGAAGATGCTGACCAAGTTCGAGACGAAGAGCAACCGGGTGA AGGGGCTGAGCTTCCACCCGCGGCGGCCATGGATCCTGGCCAGCCTCCACAGCGGGGTGA TCCAGATGTGGGACTACCGCATGGGCACCCTCCTCGACCGCTTCGACGAGCACGACGGCC CCGTCCGCGGCGTCCACTTCCACGCCACGCAGCCGCTCTTCGTCTCCGGAGGTGATGATT ACAAGATTAAGGTGTGGAATTACAAGACACACCGCTGCCTCTTCACACTTCACGGGCACC TTGACTATATTCGCACCGTGCAATTCCACCACGAATACCCATGGATAGTAAGTGCTAGTG ATGACCAGACAATCCGGATCTGGAACTGGCAGTCACGCACATGTGTAGCTGTGCTGACTG GACATAACCACTATGTCATGTGCGCATCATTCCATCCCAAGGAGGACCTGGTTGTGTCAG CATCACTGGATCAGACTGTCCGTGTTTGGGATATTGGTGCTTTGAGGAAGAAGACGGTGT CACCTGCAGATGACATCCTGCGTCTCACCCAGATGAACACAGATCTGTTTGGAGGTGTTG ATGCAGTTGTAAAATATGTGTTGGAAGGGCATGACCGTGGGGTGAACTGGGCATCATTTC ACCCCACATTGCCACTCATTGTTTCCGGGGCAGATGACCGACAAGTGAAGCTATGGAGAA TGAATGACACGAAGGCTTGGGAAGTTGATACTTTGCGGGGACACATGAATAATGTGTCAT GCGTGATGTTCCATGCTAAGCAAGACATCATTGTGTCCAACTCAGAGGACAAAAGCATTC GCATCTGGGATGCCACAAAGCGAACCGGTATTCAAACGTTCAGGCGGGAACATGATCGTT TCTGGATTCTTTCTGCTCACCCTGAGATGAATCTTCTTGCCGCTGGTCATGACAGTGGTA TGATTGTGTTTAAATTGGAGAGGGAACGTCCAGCTTTCTCTGTGAGTGGAGATACTGTTT TCTATGTGAAGGACCGTTTTCTTCGTTTTTTTGAATTCACCACACAGAAGGAAGTTCAGC TTGCTCCAATAAGAAGACCTGGATCAGTGAGCTTGAACCAGTCACCCAAGACACTATCTT ACAGTCCAACTGAAAATGCTGTCCTGATTTGCTCTGATGTGGATGGAGGCTCATACGAAC TCTACATTGTTCCCAAGGATTCTGCTGGCAGGGCTGACTATTTGCAGGATGCAAAGAAGG GAGCTGGTGGGTCAGCTGTTTTCGTGGCACGCAACAGGTTTGCAGTCCTTGAGAAGAGTA GCAATCAAGTTTTGGTGAAGAATCTTAAGAATGAAATCGTAAAGAAAAGCCCTCTTCCTA TTGCCACGGATGCAATTTATTATGCTGGGACTGGTAACTTGCTGTGCAAAGCCGAAGACC GAGTGACCATCTTTGATCTGCAGCAAAGGTTAATTCTTGGTGAGCTCCAGGCACCTTCTG TTAAATATGTTGTTTGGTCTAGTGATATGGAATCTGTCGCACTGCTGAGCAAGCATGCAG TGGTTATAGCAAACAAGAAGCTCGTCCATCGCTGTACACTGCACGAAACCATTCGTGTGA AAAGTGGTGCCTGGGATGAGAATGGTGTGTTTATTTACACTACCCTGAATCATATCAAGT ATTGCCTTCCCAATGGAGATAGTGGGATTATTAAAACCCTCGATGTTCCTATATACATAA CAAGGGTTATTGGGAACAATATATTCTGTCTAGATCGTGATGGTAAGAACAAGCTGGTCA CAGTTGATGCATCTGAGTACATTTTCAAGCTGGCCCTTCTACGCAAACGGTATGATCATG TGATGAGTATGATCAAGAATTCCCAGCTGTGTGGGCAAGCTGTGATTTCTTATTTACAAC AGAAAGGCTTTCCAGAAGTTGCCCTCCACTTTGTGAAAGATGAGAAGACAAGATTTAACC TTGCTCTTGAGAGTGGTAACATCCAAATCGCAGTTGCTTCTGCAAAAGAGATTGATGACA AGGATCACTGGTACAGGTTGGGAATTGAGGCCCTGAGGCAGGGAAATGTTGGTATTGTGG AATATGCATACCAACGTACGAAGAATTTTGAGAGGCTTGCTTTCCTATATCTTATTACTG GTTACATGGACAAGGTGGGTTTCATGTGCAAAATTGCTGGACAGAACAATAACCTGATGG GTCAATTCCACAATGCTCTGTATCTTGGTGATGCGTTGAAGAGAGTTGAGATCCTAGAGA ATGCTGGACAGCTACCTCTTGCTTATATTACTGCTACCACCCATGGGCTCACAGAAATTG CTGATAGGCTTGCCGCTGAGCTGGGTGAAAATATTCCTTCTCTTCCTGAAGGAAAAGCTC GCTCTCTTTTGATCCCCCCTGCTCCTCTTACAGCCAGTGGTGATTGGCCATTGCTTAGGG TGATGCATGGTATCTTTGAGGGTGGACTGGATGCTACTGGGAAGGCTGAACTTGAGGAAG ACGATGAAGCTGCTGGTGCTGACTGGGGTGATGAGGACCTGGATATGGTTGATGCAAGCG AAGCGATGGCAAATGGTGGTGACGGTTTTGATGCTGAGGAGGGTGAAGCAAATGAGGAGG ATGGCGAGGAAGGTGGTTGGGACCTAGAAGATCTGGAACTTCCGCCTGAAGCAGAGACCC CTAAAAATGCTGGCAATGCACGCTCAGCGGTCTTCGTTGCTCCTCCACCAGGCATGCCTG TCAGCCTGATTTGGACTCAGAAATCTTCTCTTGCTGGGGAGCATGCCGCAGCAGGGAACT TTGACACTGCAATGAGGTTGCTTAGCCGCCAGTTGGGCATAAAAAACTTTGCTCCCCTCA AGCCCCTGTTTGTTGATCTGCACATGGGCAGCCACTCATATCTTCGTGCACTTGCAACTG CCCCCATAATACCAATCGCTGTTGAGAAAGGTTGGAGCGAGTCTGCAAGTCCTAACGTGA GAGGCCCTCCTGCACTTGTTTTCACCTTCCCACAAATGGAAGACAGACTCAAGGCTGCCT ATAAGGCCACCACAGATGGTAAGTTCCCAGAAGCCCTGAGGCAGTTCCTTAGCATCTTGC ATACCATCCCTCTTATCGTGGTAGACTCGAGGAGGGAAGTGGATGAAGTGAAAGAGTTGA TCGAGATTGTGAGGGAGTATGTTCTTGGCCTGAGGATGGAACTTAAGAGGAAGGAGCTGA GAGATGATGTCAACCGCCAACAAGAATTGGCGGCTTACTTCACTAACTGCAAGCTTCAGA GAGTTCATATGAGGCTTGTGCTTGGAAGCGCTATGGGTCTGTGCTACAAGCAAAAGAACT TCGCTACTGCAGAGCACTTTGCAAGGATGCTTCTGGAGAACAACCCTAATGAGGCCCAAG CAAGGAGGGCTCGACAGGTGCAGCAGCAGTGCAGTGGCAAGAAGGATAGCTCTGAGCTGA ACTATGACTACAGAAATCCATTTGTTGTCTGTGGCGCCACGTATGTTCCAATCTACCGTG GCCAGAAGGATGTTTCCTGCCCGTACTGTGGCTCCCGGTTTGTTCCTTCGATCGAAGGGC AGCTTTGTACCATATGTGAGCTTGCCGTGGTTGGTGCAGATGCTTCAGGCCTCCTCTGCT CCCCTACGCAGTCGAGATAAGCGTCGGTAGATATGCTCCCTTATATTCTTTCTAGTCTCT CTTAAGACTTCGCTATGATATATTTTACCAGGATGTTTACTGATTGTAAGGAATAAGTAG TGTTATACATGGTTGAGTTTTTGTTTCACTTTTTCTCCATTTCCCTTGATTTTTGTTTGC CTCGAGGCTGTTGTTACACTTGATACATGCTTGAGGACTTCTGATCAGCTCATGCAAATG CTATGCTCGGACGTTATGTACCAATGTTTGTTTCACTCATGTAAACATTCGGCGTCGTGT TAGTTACATTCATTAGTAACTATGAATGTAACAGTTGCCAATGACCAAGTTAACAAATTA CGCTTAGTGTTGTAAATTTCAATCCAGACGTGTGTGGATTGTGCTCGGGCAAGAACAGTT TATAGATTAGTGAATTTTGC