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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0708800-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:28585264:28586241:-1 gene:Os03g0708800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0708800-01);Similar to GEBP transcription factor (Fragment). (Os03t0708800-02);Hypothetical conserved gene. (Os03t0708800-03)
Sequence

ATGCCCTCGCCCTACACCCGCTCCCAGCTCTCCGAGAAGCTCCGCCGCCTCAAGAACAAG
TTCCGCGGCATGTCCGCCCGCGTCGCACGGGGCCTCGACCCCGCCCGCCTCGCGCCGCAC
GACCGCGACGTGCTCCACCTCTGCTCCCGCCTCTGGGACCCCGCCAACGCCGCCACCTCG
CCCTTCGCCGCCGCCGGTGACGCCTCCTCGGGGAACAAGCGCCGCCGCGCCGCCCCGCGC
GCCGGGCCGCTCATGCCCCCGGATCCCTCAGGGGACAGCAATTCCCATGATTACAACGGC
GGTATTAGCGCCGGTACGCCCGGCGCATTTGGGGATGGGCACGGTGGTGAGGAAATGATG
TATCTTGAGCAGGAAAGTGGGCACTTTGGTTATCATGGAGATGTCGCGATTGCGGCTGAC
GGAAGCCTTGATGGGATTGTGAAGGTGCAGCCTGAGACTCTTCCTGCCCTCCCCAGTATC
GGGGACATTGCGGTTCACAGTGAGAATGGCAACGGCAAGGCCGTGGTGCCACGTAGCAAT
GAGCATCACATGGCAAATGCCGTGCTGGATATATTTGAGGAGTGCTTGCGAGAGGTGAAG
GCCAATGGCATTACCTACGGTGCTAATGTGAATGGGGGCAGTGAACTTGCAAGGCGATGG
AGAGCACAGAGGATTGATGAGCTTGATGTGTTGAGCCGGAGGCTAAGGTTGCTTGTTGAG
GATGCTGCAGCGGCTGGTCGCTAA

Peptide Sequence

PEP ID

Os03t0708800-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:28585264:28586241:-1 gene:Os03g0708800 transcript:Os03t0708800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0708800-01);Similar to GEBP transcription factor (Fragment). (Os03t0708800-02);Hypothetical conserved gene. (Os03t0708800-03)
Sequence

MPSPYTRSQLSEKLRRLKNKFRGMSARVARGLDPARLAPHDRDVLHLCSRLWDPANAATS
PFAAAGDASSGNKRRRAAPRAGPLMPPDPSGDSNSHDYNGGISAGTPGAFGDGHGGEEMM
YLEQESGHFGYHGDVAIAADGSLDGIVKVQPETLPALPSIGDIAVHSENGNGKAVVPRSN
EHHMANAVLDIFEECLREVKANGITYGANVNGGSELARRWRAQRIDELDVLSRRLRLLVE
DAAAAGR

Transcript Sequence

Transcript ID

Os03t0708800-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28585264:28586241:-1 gene:Os03g0708800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0708800-01);Similar to GEBP transcription factor (Fragment). (Os03t0708800-02);Hypothetical conserved gene. (Os03t0708800-03)
Sequence

CCATGCCCTCGCCCTACACCCGCTCCCAGCTCTCCGAGAAGCTCCGCCGCCTCAAGAACA
AGTTCCGCGGCATGTCCGCCCGCGTCGCACGGGGCCTCGACCCCGCCCGCCTCGCGCCGC
ACGACCGCGACGTGCTCCACCTCTGCTCCCGCCTCTGGGACCCCGCCAACGCCGCCACCT
CGCCCTTCGCCGCCGCCGGTGACGCCTCCTCGGGGAACAAGCGCCGCCGCGCCGCCCCGC
GCGCCGGGCCGCTCATGCCCCCGGATCCCTCAGGGGACAGCAATTCCCATGATTACAACG
GCGGTATTAGCGCCGGTACGCCCGGCGCATTTGGGGATGGGCACGGTGGTGAGGAAATGA
TGTATCTTGAGCAGGAAAGTGGGCACTTTGGTTATCATGGAGATGTCGCGATTGCGGCTG
ACGGAAGCCTTGATGGGATTGTGAAGGTGCAGCCTGAGACTCTTCCTGCCCTCCCCAGTA
TCGGGGACATTGCGGTTCACAGTGAGAATGGCAACGGCAAGGCCGTGGTGCCACGTAGCA
ATGAGCATCACATGGCAAATGCCGTGCTGGATATATTTGAGGAGTGCTTGCGAGAGGTGA
AGGCCAATGGCATTACCTACGGTGCTAATGTGAATGGGGGCAGTGAACTTGCAAGGCGAT
GGAGAGCACAGAGGATTGATGAGCTTGATGTGTTGAGCCGGAGGCTAAGGTTGCTTGTTG
AGGATGCTGCAGCGGCTGGTCGCTAAGCGGACATACTGGTGGTTTTGGTGACGTGCTTCC
GCCCTTCACCCCATGTGTATAAAATATTAAAATCTAGATTATTATGCTATATGCTTTTGT
AGTTCCTCACTCAGCTTGGGCCTTGCCTTAGTCAGCCTAATATGCCTATTATTTATGCCT
ATGTACATCGTCTACGGATATTGCCTTTTAGTTTAATTATTTCATCAGCATAATATATAT
GGTTCCAGCATTGTTATC