Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0707900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:28533104:28541241:-1 gene:Os03g0707900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Toc64. (Os03t0707900-01)
Sequence

ATGGCGTCCTCGACGGCGGCCAACCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTC
CTCCTGGCGGCGAAGCGGCTGCGGCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCC
CGCCTCGAGCTCCTCCCCCCGCCGCAGCCGCCGCCCCCCCAGGCGCGACACCCACTCACG
GGGCTCTGCTTCGCCATCGCCGACGCATTCCACGTAACTGGTTATATAACAAGTTTTGGC
AGCTTAGAATGGGCAAAGACACATGATGCAGCAACACAAACATCTCTAGTCGTTTCATCT
CTTGTAGATGGTGGTGCTATGTGTGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGT
ATCCATGGTGAGAATAAACATTTTGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTA
CCTGGAGGATGTTCAAGTGGGTCAGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCC
TTAGGTATTGATACCATTGGAGGAGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCA
TTCCGGCCTTCACATGCTGTTGTCCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTG
GATGCCATAGGTTGGTTTGCGAGGGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTT
CTGAGGCTACCCTACGCTGATATTCGACAACCCAGACATTTCTACATAGCAGATGATTGC
TTTGAAATGTCAAAGGTGCATGCAAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAA
AAGCTATTTGGGAGACAAGTCCTGGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGA
ATACCCAGCCTGAGGAACAATTCAAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTA
GCACTTTCTAGGGCTATGCAGTTTCTTCACAAACATGAATTCAAAGATCAACATATGGAG
TGGATAAACTCTGTTAAGCCTGCTGTTGATGCATGCATAGTTGGTAATTTGTCTGATGAT
GGTGAGTCAACTATCAATAACAGTCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGT
GCTCTTCTTAAGGATGATGGAATTCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAA
CTAAATGCCAGGGAACTTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCT
TTAGCTAGCATGTCAGGGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGT
CCAGTTTCAGTTTCTTTGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATT
CAAACAATTTATGCTACCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCG
AGTAAACAGGCGATGAGTGAAGAAGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCA
TTTAAGGAGAAACAATGGCAAAAGGCAATAAATTTCTATACTGAAGCAATCAAATTAAAT
AATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTAC
CGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATATTGATCCAAAGATTGTAAAAGCT
TATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGAT
TTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGG
TTAAAGAAGCTATTTCCGTAA

Peptide Sequence

PEP ID

Os03t0707900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:28533104:28541241:-1 gene:Os03g0707900 transcript:Os03t0707900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Toc64. (Os03t0707900-01)
Sequence

MASSTAANLWVLLGLGIAGVLLAAKRLRRPARPDNGAFIARLELLPPPQPPPPQARHPLT
GLCFAIADAFHVTGYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAMCVGKTVIDEMAFS
IHGENKHFGTPTNPAAPDRVPGGCSSGSAVAVAAGIVDFSLGIDTIGGVRVPGSYCGVLA
FRPSHAVVPNNGVIPVAPSLDAIGWFARDPSVLRRVGHLLLRLPYADIRQPRHFYIADDC
FEMSKVHARRLTQVVTKSVEKLFGRQVLGHVNLENYLASRIPSLRNNSNGHGDSKFSSLL
ALSRAMQFLHKHEFKDQHMEWINSVKPAVDACIVGNLSDDGESTINNSQDARKEVRAALG
ALLKDDGILVIPTVLGCPPKLNARELSSQDYNVQTSCLTSLASMSGCCQVTVPLGTHDKC
PVSVSLIARHGGDRFLLDTIQTIYATIQEQVDALAKSNVSSKQAMSEEAAEAAKEKGNIA
FKEKQWQKAINFYTEAIKLNNKVATYYSNRAAAFLELASYRQAEADCTSAIDIDPKIVKA
YLRRGTAREMLGYYKEAVDDFSHALVLEPMNKTAGVAINRLKKLFP

Transcript Sequence

Transcript ID

Os03t0707900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28533104:28541241:-1 gene:Os03g0707900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Toc64. (Os03t0707900-01)
Sequence

GGTATTATCCAATCCTTCCGCCACGCCTCCGCCTCCGCCGCCGCCTCGCCGTCCGCCTCC
GCGGCCGCCGCCGCCGCCTCGCGGCAAAACCCTAACCCTCGAACTCCCCCCCACCCCACT
CGCCCCCGCGCGGAGCAGGCGAGCGGCTACCCCAACCCGACCCCATGGCGTCCTCGACGG
CGGCCAACCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTCCTCCTGGCGGCGAAGC
GGCTGCGGCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCCCGCCTCGAGCTCCTCC
CCCCGCCGCAGCCGCCGCCCCCCCAGGCGCGACACCCACTCACGGGGCTCTGCTTCGCCA
TCGCCGACGCATTCCACGTAACTGGTTATATAACAAGTTTTGGCAGCTTAGAATGGGCAA
AGACACATGATGCAGCAACACAAACATCTCTAGTCGTTTCATCTCTTGTAGATGGTGGTG
CTATGTGTGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGTATCCATGGTGAGAATA
AACATTTTGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTACCTGGAGGATGTTCAA
GTGGGTCAGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCCTTAGGTATTGATACCA
TTGGAGGAGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCATTCCGGCCTTCACATG
CTGTTGTCCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTGGATGCCATAGGTTGGT
TTGCGAGGGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTTCTGAGGCTACCCTACG
CTGATATTCGACAACCCAGACATTTCTACATAGCAGATGATTGCTTTGAAATGTCAAAGG
TGCATGCAAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAAAAGCTATTTGGGAGAC
AAGTCCTGGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGAATACCCAGCCTGAGGA
ACAATTCAAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTA
TGCAGTTTCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTA
AGCCTGCTGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCA
ATAACAGTCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGATG
ATGGAATTCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAAC
TTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAG
GGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTT
TGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTA
CCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGA
GTGAAGAAGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTTAAGGAGAAACAAT
GGCAAAAGGCAATAAATTTCTATACTGAAGCAATCAAATTAAATAATAAAGTGGCTACAT
ACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAG
ATTGCACAAGTGCCATCGATATTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCA
CTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTG
TTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTC
CGTAAATACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACTCAAGTTCTGCATGCCT
GGGGGGTGAAAAAGAAGGTACCTGAGTGCCACCGATTGATGCTGCTATCCAAGTTCATAA
GGTACTAACTACCGTTGCTACTGGCGATAGAACTGTCTATCATCTGTGTTTTCAATTAGT
TGTTACCCCCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATA
GTAAACAATGCCTTTAAATATGCTCTAGTGGTGTTCTTGGCCCACTTCCATGTATAATAT
CGGTTTTGGCAATTATTTGTTGAGGCACCCATATTTTTCCTGT