Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0704400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:28314296:28319907:1 gene:Os03g0704400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os03t0704400-01)
Sequence	ATGGAGAGGAGGGATAATTTCCTTCAGCCCCCTGCCGCCGCCGCCGCCCCAGCCGCCGGC GGCGGAAAGGGCCTCCCGGTCCCCGCCACAGGGGACGCGACGAACCTGACCTCGTCGTCG AGCTCCACCTCCTCCCTCACGCTGTCCCCTCCGGACTTCCTGCGTCAGGTTCAGGCCGCG CTGAAGCGGCATAGGCCTACCGGTTCGATGCAGTCCAATCAACCACGAGCAACCCGAGTC CTGGTGTCCCGAGGTGAGGGCTCAACGAAAGCTGTTGCCAACCCTTCTGTGGCACAAAAT CCGGAAGGCAAGGTTATGCAGCAGAGGAGAGGCCTGCTGGGGGCTTCCAGGTTGCGAAAT GCAGCTCCTGATCAGAACAAAGCTGTTGTCTCAAGTCAAGACGAATTGTTGTTGACTACG CCTTTGACATTGGGAACTATCACTGATACCCATGATCAGAATGGTGGTCAGAACCACCAG CCGAAAAGTGACACTGATCTCTTGGTGGATAGGAAGAAATCGTCAATGGAAGTTTCTTCC TCCCAGATGGCATCCGCAAATGCATTGGTAGGGGAAGATTTCAAAAAAGACCTATTCTAT TTGACTAGCGATCCGCAGTTAACTTCTCAGAGAGATAATTTTCCTGTCGCTCAAGTAGCA GATGATCAAGGCAAGAACCACAAGGAGATTGGGATTGCTAGTGCAGCAGTTGAGATGGAT ATCAAGTATGATGCAGCTAACTTGTCCCGAAGAATTGATGAGGCTTGTGATCAGAATCAT GGAGAGCCAATGACTCGTTGCTCTGCCATGGGTTCATCAGTGACTGCTGTATCTTTATAT TCAGGGCCTACTATTCAAAGTAAAAGTGCTGCTCAGATTGATCAATATGCTTCACCAGCT CAGATGCCACAATGTGGCAGAGAATCATCTGGTGTATCAGGTCATGGCTCTCAAAAACTG CATGGAGTGGCAATGAATCATGCTGATTGCAATACCAACAAACAGCAGGTTGATACCAAT GGTGGGATGGACAAACCTGTTTCTAGTAGTGCAGTTTGTTTGCCATCCCAAGGGTTATCT GGGAATGATCAATCTTTGTCTGCCAAGGATGATGGTGCTCCTAGACGAAGCAAGGTTGAA AAGGAGTGTCGCAAAAAGAATTATGATCCGGATGTATTCTTTAAAGTGAATGGAAAACTT TATCAGAAGCTAGGTAAAATAGGGTCTGGAGGCAGCAGTGAAGTTCACAAAGTTATATCA GCCGAGTGTACAATATATGCCCTGAAAAAAATAAAACTTAAAGGTCGGGACTACCCTACT GCCTATGGCTTTTGCCAAGAAATTGAGTACCTAAACAAGTTGAAAGGAAAGAGTAATATC ATACAGTTGATTGATTATGAGGTCACTGATAAAAGTTTGCTTCAAGATGATTCGCTGTCA CCCAGAGATGGGAGAATTAAGGATGATCACTACATTTATATGGTCCTTGAGTATGGTGAA ATTGATTTAGCTAATATGGTTGCTCAGGAGTGGAAGAAGAGGAACACCTCAAATATGAAA ATAGATGAAAATTGGCTACGTTTTTATTGGCAGCAAATGCTTAAAGCTGTCAATACAATA CATGAGGAACGGATAGTGCACTCCGATTTGAAGCCTGCAAATTTTTTGCTTGTGAGGGGT GCACTGAAACTTATTGACTTTGGCATTGCTAAAGCAATAATGAATGATACCACAAACATT CAACGTGATTCTCAGATTGGAACACTGAACTATATGTCACCTGAAGCATTCATGTGCAAT GAGCAGGACTCGGGTGGTAATGTTATCAAGTGTGGACGTCCATCTGATATTTGGTCTCTT GGTTGTATTCTTTACCAGATGGTGTATGGTAAGACACCATTTGCTGATTACAAGAATTTC TGGGCCAAGTTTAAAGTTGTTACTGATAAGAACCACAAGATCAAGTATGAACCGGTAGAT AATCCATGGCTTATTGATTTAATGCAACGATGCCTTGCATGGGACCGAAATGATCGATGG AGAATACCTCAATTGCTTGAGCACCCGTTCCTTGTTCCTTTGGTTCCAAGGGATTTACCT TCAATTGACCAAGACCCGTGTAGGTTGCTGATGGAGAGGGTTAGAGTTCACTGGGCCAAT CCCAAGCTTCATAGTTTTATTGCAGAGCTCGAGAAGGATCAATGCCGTCCAGCCACTCAA ATGTAA

Peptide Sequence

PEP ID	Os03t0704400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:28314296:28319907:1 gene:Os03g0704400 transcript:Os03t0704400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os03t0704400-01)
Sequence	MERRDNFLQPPAAAAAPAAGGGKGLPVPATGDATNLTSSSSSTSSLTLSPPDFLRQVQAA LKRHRPTGSMQSNQPRATRVLVSRGEGSTKAVANPSVAQNPEGKVMQQRRGLLGASRLRN AAPDQNKAVVSSQDELLLTTPLTLGTITDTHDQNGGQNHQPKSDTDLLVDRKKSSMEVSS SQMASANALVGEDFKKDLFYLTSDPQLTSQRDNFPVAQVADDQGKNHKEIGIASAAVEMD IKYDAANLSRRIDEACDQNHGEPMTRCSAMGSSVTAVSLYSGPTIQSKSAAQIDQYASPA QMPQCGRESSGVSGHGSQKLHGVAMNHADCNTNKQQVDTNGGMDKPVSSSAVCLPSQGLS GNDQSLSAKDDGAPRRSKVEKECRKKNYDPDVFFKVNGKLYQKLGKIGSGGSSEVHKVIS AECTIYALKKIKLKGRDYPTAYGFCQEIEYLNKLKGKSNIIQLIDYEVTDKSLLQDDSLS PRDGRIKDDHYIYMVLEYGEIDLANMVAQEWKKRNTSNMKIDENWLRFYWQQMLKAVNTI HEERIVHSDLKPANFLLVRGALKLIDFGIAKAIMNDTTNIQRDSQIGTLNYMSPEAFMCN EQDSGGNVIKCGRPSDIWSLGCILYQMVYGKTPFADYKNFWAKFKVVTDKNHKIKYEPVD NPWLIDLMQRCLAWDRNDRWRIPQLLEHPFLVPLVPRDLPSIDQDPCRLLMERVRVHWAN PKLHSFIAELEKDQCRPATQM

Transcript Sequence

Transcript ID	Os03t0704400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:28314296:28319907:1 gene:Os03g0704400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os03t0704400-01)
Sequence	GCTGCGACTGCATTTCAAATTTTTCGGGGACTCATCCCCATTCCCACCTCCTCCTCCCCC ACCAAGCTCGCTTCCGATTCGCTTCCATGGCGGCCTCCGACCACGCACGCGCATAGAGGG TGCGCAGGCTGCCCCCGAGGCCTGCCGGGCCGCAGCGCCCGCCGCTCGTTGGGAACCCTA GCGCGCCGCCCATCTGCACCTCCGGCGAGATGCCTGTGGGCCCCGCCGCAGCCGACGCCG CTGACGATGGAGAGGAGGGATAATTTCCTTCAGCCCCCTGCCGCCGCCGCCGCCCCAGCC GCCGGCGGCGGAAAGGGCCTCCCGGTCCCCGCCACAGGGGACGCGACGAACCTGACCTCG TCGTCGAGCTCCACCTCCTCCCTCACGCTGTCCCCTCCGGACTTCCTGCGTCAGGTTCAG GCCGCGCTGAAGCGGCATAGGCCTACCGGTTCGATGCAGTCCAATCAACCACGAGCAACC CGAGTCCTGGTGTCCCGAGGTGAGGGCTCAACGAAAGCTGTTGCCAACCCTTCTGTGGCA CAAAATCCGGAAGGCAAGGTTATGCAGCAGAGGAGAGGCCTGCTGGGGGCTTCCAGGTTG CGAAATGCAGCTCCTGATCAGAACAAAGCTGTTGTCTCAAGTCAAGACGAATTGTTGTTG ACTACGCCTTTGACATTGGGAACTATCACTGATACCCATGATCAGAATGGTGGTCAGAAC CACCAGCCGAAAAGTGACACTGATCTCTTGGTGGATAGGAAGAAATCGTCAATGGAAGTT TCTTCCTCCCAGATGGCATCCGCAAATGCATTGGTAGGGGAAGATTTCAAAAAAGACCTA TTCTATTTGACTAGCGATCCGCAGTTAACTTCTCAGAGAGATAATTTTCCTGTCGCTCAA GTAGCAGATGATCAAGGCAAGAACCACAAGGAGATTGGGATTGCTAGTGCAGCAGTTGAG ATGGATATCAAGTATGATGCAGCTAACTTGTCCCGAAGAATTGATGAGGCTTGTGATCAG AATCATGGAGAGCCAATGACTCGTTGCTCTGCCATGGGTTCATCAGTGACTGCTGTATCT TTATATTCAGGGCCTACTATTCAAAGTAAAAGTGCTGCTCAGATTGATCAATATGCTTCA CCAGCTCAGATGCCACAATGTGGCAGAGAATCATCTGGTGTATCAGGTCATGGCTCTCAA AAACTGCATGGAGTGGCAATGAATCATGCTGATTGCAATACCAACAAACAGCAGGTTGAT ACCAATGGTGGGATGGACAAACCTGTTTCTAGTAGTGCAGTTTGTTTGCCATCCCAAGGG TTATCTGGGAATGATCAATCTTTGTCTGCCAAGGATGATGGTGCTCCTAGACGAAGCAAG GTTGAAAAGGAGTGTCGCAAAAAGAATTATGATCCGGATGTATTCTTTAAAGTGAATGGA AAACTTTATCAGAAGCTAGGTAAAATAGGGTCTGGAGGCAGCAGTGAAGTTCACAAAGTT ATATCAGCCGAGTGTACAATATATGCCCTGAAAAAAATAAAACTTAAAGGTCGGGACTAC CCTACTGCCTATGGCTTTTGCCAAGAAATTGAGTACCTAAACAAGTTGAAAGGAAAGAGT AATATCATACAGTTGATTGATTATGAGGTCACTGATAAAAGTTTGCTTCAAGATGATTCG CTGTCACCCAGAGATGGGAGAATTAAGGATGATCACTACATTTATATGGTCCTTGAGTAT GGTGAAATTGATTTAGCTAATATGGTTGCTCAGGAGTGGAAGAAGAGGAACACCTCAAAT ATGAAAATAGATGAAAATTGGCTACGTTTTTATTGGCAGCAAATGCTTAAAGCTGTCAAT ACAATACATGAGGAACGGATAGTGCACTCCGATTTGAAGCCTGCAAATTTTTTGCTTGTG AGGGGTGCACTGAAACTTATTGACTTTGGCATTGCTAAAGCAATAATGAATGATACCACA AACATTCAACGTGATTCTCAGATTGGAACACTGAACTATATGTCACCTGAAGCATTCATG TGCAATGAGCAGGACTCGGGTGGTAATGTTATCAAGTGTGGACGTCCATCTGATATTTGG TCTCTTGGTTGTATTCTTTACCAGATGGTGTATGGTAAGACACCATTTGCTGATTACAAG AATTTCTGGGCCAAGTTTAAAGTTGTTACTGATAAGAACCACAAGATCAAGTATGAACCG GTAGATAATCCATGGCTTATTGATTTAATGCAACGATGCCTTGCATGGGACCGAAATGAT CGATGGAGAATACCTCAATTGCTTGAGCACCCGTTCCTTGTTCCTTTGGTTCCAAGGGAT TTACCTTCAATTGACCAAGACCCGTGTAGGTTGCTGATGGAGAGGGTTAGAGTTCACTGG GCCAATCCCAAGCTTCATAGTTTTATTGCAGAGCTCGAGAAGGATCAATGCCGTCCAGCC ACTCAAATGTAAGAGAGCTTTACATTGATAGAATGTGGATATGCGATGCGTATGTCCAGT TATGCTAGAAGCATCTTACTGATACACAACAAGGGGACAAGCTGACTATAGCTAACGTTA TAGCTTATCTGATTATTGAAATTGCCTACTATATTCATATATATTTGGTTATTAGGAAGC TTGCTACTGTGTGCCGTCAGAAGGTGGGACATCTTTTTATCACGCAAGATTTTCCTCAGA TGATGTATTCCTGTTACTGCTTGAACTAGGAGGTAGGCAGAACCTTAAGTAGCACAAGTG ATTTAGTATCTGTATCGCTTGGTTCCTTTGAATTTATTGTTGTAATCTGTAAATAGTACT TGCATGAGTAGGAAACTGGGAGCATTTTTTTGTGGTGCCCTTGGCATTGTACGCTCCATA TTTGCGTGAGTAGGAAACTTGGAAGTTGATGC