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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0704000-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:28301306:28303182:1 gene:Os03g0704000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 30S ribosomal protein S13. (Os03t0704000-00)
Sequence

ATGGCGACCCTCTCGATGGTCTCCGTCCCCATCGCCACCTCCTCCCTGCCCCTCTCCGCC
CGAGGCCGCAGCTCCTCCGTCTCCTTCCCCGTTCCCAAGAAAGGGGGTATTGGTCATGGT
GGCCTGCGGATCGAGTGCATTCGTATTGGTGGAGTGGAGATCCCGAACCACAAGAGGGTA
GAGTACTCACTGCAGTACATCCATGGCATTGGGCGGTCACGCTCCCGTCAGATCCTCTTG
GACCTCAATTTTGACAACAAGGTCACAAAGGACCTCTCCGAGGAGGAAGTCATCACTCTC
CGTAAGGAGGTTACCAAGTACATGATTGAGGGAGACCTTAAACGGTTTAATCGTGTGGCG
ATTGAGAGGTTGAAGGAGATTAGGTGTTACAGGGGCATCCGCCACAAGCTAGGGCTGCCA
GTTCGTGGACAGAGGACGAAGAACAATTGCAGGACGCTGAAGGGAAGGAGGGCTTCTGTT
GCGAAGAAGAAGTCGCCTGCTTCCCAGGAGGAATAA

Peptide Sequence

PEP ID

Os03t0704000-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:28301306:28303182:1 gene:Os03g0704000 transcript:Os03t0704000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 30S ribosomal protein S13. (Os03t0704000-00)
Sequence

MATLSMVSVPIATSSLPLSARGRSSSVSFPVPKKGGIGHGGLRIECIRIGGVEIPNHKRV
EYSLQYIHGIGRSRSRQILLDLNFDNKVTKDLSEEEVITLRKEVTKYMIEGDLKRFNRVA
IERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKGRRASVAKKKSPASQEE

Transcript Sequence

Transcript ID

Os03t0704000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28301306:28303182:1 gene:Os03g0704000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 30S ribosomal protein S13. (Os03t0704000-00)
Sequence

GGGTTCTATCCGAGACAGCACCGAGAGCTCCGGGAGAGAAGCGCACGCACCTCCGTCCCT
CGTCGGGAGCGCAGAAATGGCGACCCTCTCGATGGTCTCCGTCCCCATCGCCACCTCCTC
CCTGCCCCTCTCCGCCCGAGGCCGCAGCTCCTCCGTCTCCTTCCCCGTTCCCAAGAAAGG
GGGTATTGGTCATGGTGGCCTGCGGATCGAGTGCATTCGTATTGGTGGAGTGGAGATCCC
GAACCACAAGAGGGTAGAGTACTCACTGCAGTACATCCATGGCATTGGGCGGTCACGCTC
CCGTCAGATCCTCTTGGACCTCAATTTTGACAACAAGGTCACAAAGGACCTCTCCGAGGA
GGAAGTCATCACTCTCCGTAAGGAGGTTACCAAGTACATGATTGAGGGAGACCTTAAACG
GTTTAATCGTGTGGCGATTGAGAGGTTGAAGGAGATTAGGTGTTACAGGGGCATCCGCCA
CAAGCTAGGGCTGCCAGTTCGTGGACAGAGGACGAAGAACAATTGCAGGACGCTGAAGGG
AAGGAGGGCTTCTGTTGCGAAGAAGAAGTCGCCTGCTTCCCAGGAGGAATAAGACACATT
GCCATGTATTTACCTTTGGTTCTTTGCCTCTTGTTTATTTTTTGTGTTCTGCTTGACCAC
GCTCTTGTCTGGTATTATGAGATTTTATGTTGGTGTCGTCATAGATGAATCACGGGTTGT
GATCTGTCACTGAAAAAGTTATATTTGTCACCTGTCTTACATGAACTGATGCTAAATTAA
GGTTATACTATGTTTTTCAG