Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0703900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:28297146:28300290:1 gene:Os03g0703900 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNARE associated Golgi protein domain containing protein. (Os03t0703900-01)
Sequence

ATGCCGTTCCCGCGCCGCGACATCGAGGCCGCTGGCGCCGGCTCCGGCTCCGGCGACGAC
GACTCGCCGGCCGCCAAGAGGGGCAAGCCAGAGGCCGCGGGGGCGCGCCCCTCGCTGACG
CGGACCGAGGCGGCCGCGGCCGCCTCCGTGCTGGTGCTCTTCCTCGTCGGGATCTTCTGC
GTCTTCCGCGCCGCGCCCCGCCGCGAGTTCGAACAGATCCTCCGCCTCCCCCGCAGCCTC
GCCGACGTCCGCCTCCTCAAAGACAATCTTGCGGTGTATGCAAGAGATTATCAGGCTAAT
TTCATACTGGGATATTGCTCAATATACATCTTTATGCAAACATTTATGATCCCTGGAACA
ATATTCATGTCTTTACTTGCTGGAGCTCTTTTTGGGGTGGTTAAAGGTGGTATTTTGGTC
GTATTCACTGCAACAGCAGGTGCTTCGTCTTGCTACTTTGTCTCCAAGTTGATTGGGAGG
CCATTGATTAGCTGGTTGTGGCCTGAAAAACTGAGGTATTTCCAGTCAGAGATTGCCAAA
AGGAAAGAAAAGCTATTGAATTACATGCTTTTTCTTAGAATTACACCAACTTTACCCAAC
ACATTCATAAACATGGCGTCACCTATTGTTGACATACCTTTCCACATTTTCTTTGCTGCA
ACACTAATTGGTCTCATCCCAGCATCTTATATCACTGTAAAGGCTGGTAGGGCACTAGGC
GATCTAAGATCACTTAGGGAACTGTATGACTCAAAAACACTAGTAATTCTATTCCTCATT
GGAACTGTTGCTGTTGCTCCAACGATTCTGAAAAGGAAGAGAATATACGAATGA

Peptide Sequence

PEP ID

Os03t0703900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:28297146:28300290:1 gene:Os03g0703900 transcript:Os03t0703900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNARE associated Golgi protein domain containing protein. (Os03t0703900-01)
Sequence

MPFPRRDIEAAGAGSGSGDDDSPAAKRGKPEAAGARPSLTRTEAAAAASVLVLFLVGIFC
VFRAAPRREFEQILRLPRSLADVRLLKDNLAVYARDYQANFILGYCSIYIFMQTFMIPGT
IFMSLLAGALFGVVKGGILVVFTATAGASSCYFVSKLIGRPLISWLWPEKLRYFQSEIAK
RKEKLLNYMLFLRITPTLPNTFINMASPIVDIPFHIFFAATLIGLIPASYITVKAGRALG
DLRSLRELYDSKTLVILFLIGTVAVAPTILKRKRIYE

Transcript Sequence

Transcript ID

Os03t0703900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28297146:28300290:1 gene:Os03g0703900 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNARE associated Golgi protein domain containing protein. (Os03t0703900-01)
Sequence

GATCAAACCGGGCACAGAAAAACAAAGAAAACCAACGAAAAAAACGACGCAACGCGGCGC
GGCAGAGAAGACAACACCGCACCACCACCCCCGCCTCCTCCTCCTCCTCGTCGCCGTGCC
CGATGAAGGCATGAAGCTGCCCCCGAGACATGCCTCTTAGCCCACGTGCGCCCTCCCGCG
TCTCGCCCAAGCCCCTTGCGCCGCAGGCATGCCGTTCCCGCGCCGCGACATCGAGGCCGC
TGGCGCCGGCTCCGGCTCCGGCGACGACGACTCGCCGGCCGCCAAGAGGGGCAAGCCAGA
GGCCGCGGGGGCGCGCCCCTCGCTGACGCGGACCGAGGCGGCCGCGGCCGCCTCCGTGCT
GGTGCTCTTCCTCGTCGGGATCTTCTGCGTCTTCCGCGCCGCGCCCCGCCGCGAGTTCGA
ACAGATCCTCCGCCTCCCCCGCAGCCTCGCCGACGTCCGCCTCCTCAAAGACAATCTTGC
GGTGTATGCAAGAGATTATCAGGCTAATTTCATACTGGGATATTGCTCAATATACATCTT
TATGCAAACATTTATGATCCCTGGAACAATATTCATGTCTTTACTTGCTGGAGCTCTTTT
TGGGGTGGTTAAAGGTGGTATTTTGGTCGTATTCACTGCAACAGCAGGTGCTTCGTCTTG
CTACTTTGTCTCCAAGTTGATTGGGAGGCCATTGATTAGCTGGTTGTGGCCTGAAAAACT
GAGGTATTTCCAGTCAGAGATTGCCAAAAGGAAAGAAAAGCTATTGAATTACATGCTTTT
TCTTAGAATTACACCAACTTTACCCAACACATTCATAAACATGGCGTCACCTATTGTTGA
CATACCTTTCCACATTTTCTTTGCTGCAACACTAATTGGTCTCATCCCAGCATCTTATAT
CACTGTAAAGGCTGGTAGGGCACTAGGCGATCTAAGATCACTTAGGGAACTGTATGACTC
AAAAACACTAGTAATTCTATTCCTCATTGGAACTGTTGCTGTTGCTCCAACGATTCTGAA
AAGGAAGAGAATATACGAATGATGCCACTAAAAAGCATCTAAACAGTGTATTAGTAGAGC
ACTCCAGAAGTGTATTAGTTTTTTTTCCCTTTCTTTGTTGATATTGTATACCTATTCAAT
TTAGCTGTAGAGATGTAGTAGTAACATGATGAATGTTTTCCTCAATAATAGATGACGCTA
AGCTGTTGCATCTGTTGCCCCAATGTTCTTATAAATCCCCACGTCCCAATTAACGATGCG
GTGGAACTATCTGGTTGTTGTGGTTTTACAGTAAATCTTACTGCTCCCAATTGGATGGGC
AACCTTATCCGTCGTTTTGAAATGATGTGTTATTTGCCACC