Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0700700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:28107175:28113300:1 gene:Os03g0700700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 1 description:Similar to Lipoxygenase (Fragment). (Os03t0700700-01);Similar to Lipoxygenase. (Os03t0700700-02);Similar to Lipoxygenase. (Os03t0700700-03);Similar to Lipoxygenase. (Os03t0700700-04)
Sequence	CAGGTTGACGGGGAGGAACAAGGAGGCGTGGAAGGAAGGGAGGATCCGTGGGACGGCGTC CACAACATCCTCGGCCACAAGGAGGGCGTCGCCTTCCGCCTCGTCAGCGCCACCGCCCGC GACCCAAGCAATGGAGGGAGGGGGAAGCTGGGGAAGCCGGCGCACCTGGAGGAGCTGGTG GTGACGATGAAGTCGACGGCGGCGGGGGAGTCGGTGTTCCGGGTGGCGTTCGAGTGGGAC GAGTCGCAGGGGATCCCCGGCGCCGTCGTCGTCACCAACTCCAACCGGTCCGAGTTCTTC CTCAAGACGCTCACCCTCGACGGCGTCCCCGGCAAGGGCACCGTCGTCTTCGTCGCCAAC TCGTGGATCTACCCCGCCGACAACTACCAGTACGAGCGCGTCTTCTTCGCCAACGATACA TATCTGCCTAGCAAAATGCCTGCACCTTTGATCCCTTACCGGCAAGAAGAACTCAACATT CTACGAGGGGACGGTAAAATTGGACCATACAAGGAGCATGACCGTATCTACCGTTATGAT TACTATAACGACCTTGGCCAACCAGACAAAGGCAGTAAACTAGTACGACCAGTCCTCGGT GGCAGCCAAGAACTCCCCTATCCCCGTCGAGGCAGAACTGGCCGGGCCCCAACAAAGACT GACCCAAATACAGAAAGCAGGCTTCCTCTGCTGGACTTGAACATTTATGTCCCACGCGAC GAACGGTTCGGGCACCTCAAGATGTCAGACTTCCTTGGGTACTCTCTTAAGGCTATTGTT GAGGGTGTTCTCCCAATAATAAGGACCTATGTCGATACGACACCAAAGGAGTTTGATTCT TTTCAAGACATCATGGAACTCTATGAAGGTGGATTGAAAGTGGCCAATGCCTCTGCACTA GCAGAGATCAAGAAGAGAGTTCCCTTTGAACTTATTAAGAGTCTTTTGCCAGTTGCTGGC GATCAAGTCTTGAAGTTACCCCTACCACATGTTATCAAAGAGGACAAATTTGCTTGGAGG ACTGATGAGGAGTTTGCACGAGAAATGCTCGCAGGAGTTAACCCAGTGATGATCAAGCGT CTGACGAATTTCCCGGCAAAAAGTACTCTGGATCCAAATGTGTACGGTGACCATACCAGC AAGATCACCGAAGCTCACATTAAGCACAACATGGAGGGCCTCACGGTGCAAAATGCACTG AAGGGCAACAGGCTTTTCATCCTAGACCACCACGATCACTTCATGCCGTTCCTGGACAAG ATCAACAAGTTGGACGGTAACTTCATATATGCGAGCAGGACCATTCTGCTCCTGAAGGAC GATGGCACCCTGAAGCCCCTGGCGATCGAGCTGAGCCTGCCGCACCCCGATGGCCAGCAG CACGGCGCCGTCAGCAAGGTGTACACTCCAGCCAACACCGGCGTCGAGAGCCAAATCTGG CAGCTCGCCAAGGCTTACGCCTCCGTCAACGACTCTGCTTGGCACCAGCTGATCAGCCAC TGGCTGAACACTCACGCCGTGATCGAGCCGTTCGTGATCGCGACGAACCGGCAGCTCAGC GTGGTGCACCCCGTGCACAAGCTGCTGAGCCCGCACTACCGCGACACGATGAACATCAAC GCTCTGGCACGGCAGACACTCATCAACGCCGATGGCATCTTCGAGAAGACCGTCTTCCCA GGCAAGTACGCGCTCGAGATGTCCTCCGTCGTGTACAAGAACTGGAAGTTCACCGAGCAG GCTCTCCCCGTCGATCTCGTCAAGAGAGGGGTGGCCGTGCCGGACCCGACGAGCCCGTAC AACGTCCGGCTGCTGATCAAGGACTACCCGTACGCCGTGGACGGGCTGGTGATCTGGTGG GCGATCGAGCGGTGGGTGGGCGAGTACCTGGCCATCTACTACCCCAACGACGGCGTGCTC CGCGGCGACGAGGAGCTGCAGGCGTGGTGGAAGGAGGTGCGCGAGGTCGGCCATGGCGAC CTCAAGGACCAGGACTGGTGGCCCAAGATGGACACCGTCCAGGAGCTCACCCGGGCGTGC ACCATCATCATCTGGATCGCGTCGGCGCTGCACGCGGCGGTCAACTTCGGCCAGTACCCG TACGCGGGGTTCCTCCCGAACCGGCCGACGGTGAGCCGGCGGCCGATGCCGGAGCCGGGC ACCGAGGAGTACGCGAAGCTGGAGCGCGGCGGTGACGAGGCCGACCTGGTGTTCATCCAC ACAATCACCAGCCAGTTCCAGACCATCCTCGGCATCTCGCTCATCGAGATCCTGTCCAAG CACTCCTCCGACGAGGTCTACCTCGGCCAACGCGACACGCCGGAGTGGACGTCGGACGCC AAGGCGCTGGACGCGTTCAAGAGGTTCGGCAGCCGGCTGGTGGATATCGAGAACCGGATC AAGGACATGAACGGCAACTCGGCGCTCAAGAACCGGAACGGGCCGGTGAAGATGCCGTAC ATGCTGCTGTACCCCAACACGTCGGATGTCACCAAGGAGAAGGGCCAAGGGCTCACCGCC ATGGGCATCCCCAACAGCATCTCCATCTGA

Peptide Sequence

PEP ID	Os03t0700700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:28107175:28113300:1 gene:Os03g0700700 transcript:Os03t0700700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 1 description:Similar to Lipoxygenase (Fragment). (Os03t0700700-01);Similar to Lipoxygenase. (Os03t0700700-02);Similar to Lipoxygenase. (Os03t0700700-03);Similar to Lipoxygenase. (Os03t0700700-04)
Sequence	QVDGEEQGGVEGREDPWDGVHNILGHKEGVAFRLVSATARDPSNGGRGKLGKPAHLEELV VTMKSTAAGESVFRVAFEWDESQGIPGAVVVTNSNRSEFFLKTLTLDGVPGKGTVVFVAN SWIYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGDGKIGPYKEHDRIYRYD YYNDLGQPDKGSKLVRPVLGGSQELPYPRRGRTGRAPTKTDPNTESRLPLLDLNIYVPRD ERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDSFQDIMELYEGGLKVANASAL AEIKKRVPFELIKSLLPVAGDQVLKLPLPHVIKEDKFAWRTDEEFAREMLAGVNPVMIKR LTNFPAKSTLDPNVYGDHTSKITEAHIKHNMEGLTVQNALKGNRLFILDHHDHFMPFLDK INKLDGNFIYASRTILLLKDDGTLKPLAIELSLPHPDGQQHGAVSKVYTPANTGVESQIW QLAKAYASVNDSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRDTMNIN ALARQTLINADGIFEKTVFPGKYALEMSSVVYKNWKFTEQALPVDLVKRGVAVPDPTSPY NVRLLIKDYPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHGD LKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEPG TEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDA KALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTA MGIPNSISI

Transcript Sequence

Transcript ID	Os03t0700700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:28107175:28113300:1 gene:Os03g0700700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 1 description:Similar to Lipoxygenase (Fragment). (Os03t0700700-01);Similar to Lipoxygenase. (Os03t0700700-02);Similar to Lipoxygenase. (Os03t0700700-03);Similar to Lipoxygenase. (Os03t0700700-04)
Sequence	TGACTTGTGATCTGCGAGGATGCAGGTGCAGGGGTTCTTTGACAGGTTGACGGGGAGGAA CAAGGAGGCGTGGAAGGAAGGGAGGATCCGTGGGACGGCGTCCACAACATCCTCGGCCAC AAGGAGGGCGTCGCCTTCCGCCTCGTCAGCGCCACCGCCCGCGACCCAAGCAATGGAGGG AGGGGGAAGCTGGGGAAGCCGGCGCACCTGGAGGAGCTGGTGGTGACGATGAAGTCGACG GCGGCGGGGGAGTCGGTGTTCCGGGTGGCGTTCGAGTGGGACGAGTCGCAGGGGATCCCC GGCGCCGTCGTCGTCACCAACTCCAACCGGTCCGAGTTCTTCCTCAAGACGCTCACCCTC GACGGCGTCCCCGGCAAGGGCACCGTCGTCTTCGTCGCCAACTCGTGGATCTACCCCGCC GACAACTACCAGTACGAGCGCGTCTTCTTCGCCAACGATACATATCTGCCTAGCAAAATG CCTGCACCTTTGATCCCTTACCGGCAAGAAGAACTCAACATTCTACGAGGGGACGGTAAA ATTGGACCATACAAGGAGCATGACCGTATCTACCGTTATGATTACTATAACGACCTTGGC CAACCAGACAAAGGCAGTAAACTAGTACGACCAGTCCTCGGTGGCAGCCAAGAACTCCCC TATCCCCGTCGAGGCAGAACTGGCCGGGCCCCAACAAAGACTGACCCAAATACAGAAAGC AGGCTTCCTCTGCTGGACTTGAACATTTATGTCCCACGCGACGAACGGTTCGGGCACCTC AAGATGTCAGACTTCCTTGGGTACTCTCTTAAGGCTATTGTTGAGGGTGTTCTCCCAATA ATAAGGACCTATGTCGATACGACACCAAAGGAGTTTGATTCTTTTCAAGACATCATGGAA CTCTATGAAGGTGGATTGAAAGTGGCCAATGCCTCTGCACTAGCAGAGATCAAGAAGAGA GTTCCCTTTGAACTTATTAAGAGTCTTTTGCCAGTTGCTGGCGATCAAGTCTTGAAGTTA CCCCTACCACATGTTATCAAAGAGGACAAATTTGCTTGGAGGACTGATGAGGAGTTTGCA CGAGAAATGCTCGCAGGAGTTAACCCAGTGATGATCAAGCGTCTGACGAATTTCCCGGCA AAAAGTACTCTGGATCCAAATGTGTACGGTGACCATACCAGCAAGATCACCGAAGCTCAC ATTAAGCACAACATGGAGGGCCTCACGGTGCAAAATGCACTGAAGGGCAACAGGCTTTTC ATCCTAGACCACCACGATCACTTCATGCCGTTCCTGGACAAGATCAACAAGTTGGACGGT AACTTCATATATGCGAGCAGGACCATTCTGCTCCTGAAGGACGATGGCACCCTGAAGCCC CTGGCGATCGAGCTGAGCCTGCCGCACCCCGATGGCCAGCAGCACGGCGCCGTCAGCAAG GTGTACACTCCAGCCAACACCGGCGTCGAGAGCCAAATCTGGCAGCTCGCCAAGGCTTAC GCCTCCGTCAACGACTCTGCTTGGCACCAGCTGATCAGCCACTGGCTGAACACTCACGCC GTGATCGAGCCGTTCGTGATCGCGACGAACCGGCAGCTCAGCGTGGTGCACCCCGTGCAC AAGCTGCTGAGCCCGCACTACCGCGACACGATGAACATCAACGCTCTGGCACGGCAGACA CTCATCAACGCCGATGGCATCTTCGAGAAGACCGTCTTCCCAGGCAAGTACGCGCTCGAG ATGTCCTCCGTCGTGTACAAGAACTGGAAGTTCACCGAGCAGGCTCTCCCCGTCGATCTC GTCAAGAGAGGGGTGGCCGTGCCGGACCCGACGAGCCCGTACAACGTCCGGCTGCTGATC AAGGACTACCCGTACGCCGTGGACGGGCTGGTGATCTGGTGGGCGATCGAGCGGTGGGTG GGCGAGTACCTGGCCATCTACTACCCCAACGACGGCGTGCTCCGCGGCGACGAGGAGCTG CAGGCGTGGTGGAAGGAGGTGCGCGAGGTCGGCCATGGCGACCTCAAGGACCAGGACTGG TGGCCCAAGATGGACACCGTCCAGGAGCTCACCCGGGCGTGCACCATCATCATCTGGATC GCGTCGGCGCTGCACGCGGCGGTCAACTTCGGCCAGTACCCGTACGCGGGGTTCCTCCCG AACCGGCCGACGGTGAGCCGGCGGCCGATGCCGGAGCCGGGCACCGAGGAGTACGCGAAG CTGGAGCGCGGCGGTGACGAGGCCGACCTGGTGTTCATCCACACAATCACCAGCCAGTTC CAGACCATCCTCGGCATCTCGCTCATCGAGATCCTGTCCAAGCACTCCTCCGACGAGGTC TACCTCGGCCAACGCGACACGCCGGAGTGGACGTCGGACGCCAAGGCGCTGGACGCGTTC AAGAGGTTCGGCAGCCGGCTGGTGGATATCGAGAACCGGATCAAGGACATGAACGGCAAC TCGGCGCTCAAGAACCGGAACGGGCCGGTGAAGATGCCGTACATGCTGCTGTACCCCAAC ACGTCGGATGTCACCAAGGAGAAGGGCCAAGGGCTCACCGCCATGGGCATCCCCAACAGC ATCTCCATCTGAGTCTCGCGTGCATTCTTTAGATCGATATACGTGTGCTATTGCTAGTGT TGCGCGTTTGCCGTCGTCGATTTGTTTCATTGTTTGTATCAGTGTGCATTACCGTGATTC TTCGTAGTTCAGGGTCTCAGGGATAAGTCGTTGCAAATGTGAGTAACCTTGAGGCATGGA TAATTTCATTAGGAATTATTCACATGGAATAATGAAAGTTAATAAAATCATTTTGCTTTC AGAGTTTGTTTCAACTTTTATGATCC