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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0700200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:28068975:28069515:-1 gene:Os03g0700200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 39 description:Conserved hypothetical protein. (Os03t0700200-01)
Sequence

ATGGCTGCTTCCGAATTCCGATCCGGCCGTCGTGCCGTCGCGCTCGTCGTCGTGATCTGC
GCCGTCCTGCTGCTGTCCTCCGCCGTGGAGCGGGCGGCGGCGCAGGTGCCCTGCAGCAAG
TGCGACCACGCGTGCAAGAAGTCGTGCAAGGGCTACGGCCGCGACTCGTCGTGCAGCCTC
CCCTGCGGCGACCCATCCAACAAGGCCGGCTGCGAGAGCTGCCTGGACGCCTACTACCTG
AAGTGCCTCAACTACTGTGGCCAGTCCTGCCGTGTGACCTGCACCAGCGGCTGA

Peptide Sequence

PEP ID

Os03t0700200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:28068975:28069515:-1 gene:Os03g0700200 transcript:Os03t0700200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 39 description:Conserved hypothetical protein. (Os03t0700200-01)
Sequence

MAASEFRSGRRAVALVVVICAVLLLSSAVERAAAQVPCSKCDHACKKSCKGYGRDSSCSL
PCGDPSNKAGCESCLDAYYLKCLNYCGQSCRVTCTSG

Transcript Sequence

Transcript ID

Os03t0700200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28068975:28069515:-1 gene:Os03g0700200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 39 description:Conserved hypothetical protein. (Os03t0700200-01)
Sequence

ACAAATTCCATCTCAGCATTTTCTCCAGTTTTTCTCCTACTCTTAACTCGCTTGATCAGC
GTCAAATCTAACAGACAGATCCATCGATGGCTGCTTCCGAATTCCGATCCGGCCGTCGTG
CCGTCGCGCTCGTCGTCGTGATCTGCGCCGTCCTGCTGCTGTCCTCCGCCGTGGAGCGGG
CGGCGGCGCAGGTGCCCTGCAGCAAGTGCGACCACGCGTGCAAGAAGTCGTGCAAGGGCT
ACGGCCGCGACTCGTCGTGCAGCCTCCCCTGCGGCGACCCATCCAACAAGGCCGGCTGCG
AGAGCTGCCTGGACGCCTACTACCTGAAGTGCCTCAACTACTGTGGCCAGTCCTGCCGTG
TGACCTGCACCAGCGGCTGAAAAAAACCGTTCACGCTTCAATTCGTCTCTGAGCTCACGG
CGCCGGCCGCCGTCGTGAAGCCTTTTGATGTGTCACGTAAATGTATGTACTGTCTCGATC
ATATGTAGTTCTGTTACTTTCTCCGTTTCATGCATATTGCAAGTTATTTTTGTTTTGTCC
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