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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0700100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:28063603:28064495:-1 gene:Os03g0700100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 38 description:Somatomedin B domain containing protein. (Os03t0700100-01)
Sequence

ATGGCTGCTGCTTCCGGCCGCCGCCGTGCCGCGGCCTTCGCCGTCGTGATCTGCGCCGCC
CTGCTGCTGCTGTCCTCCGCCGTGGAGCGGGCGGCGGCGCAGGTGCCCTGCAGCCAGTGC
GACCAGGCGTGCAAGGAATCGTGCAAGGGCTACGGGCGCGACTCGTCGTCGTGCAGCGCC
CCCTGCGGCGACCCCTCCAACAAGGACGGATGCGAGAGCTGCCTGGAGGCGTACTACTCC
AAATGCGTCAACTACTGTGGCCCGTCCTGCCATGTCACCTGCACCAGCGGCTGA

Peptide Sequence

PEP ID

Os03t0700100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:28063603:28064495:-1 gene:Os03g0700100 transcript:Os03t0700100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 38 description:Somatomedin B domain containing protein. (Os03t0700100-01)
Sequence

MAAASGRRRAAAFAVVICAALLLLSSAVERAAAQVPCSQCDQACKESCKGYGRDSSSCSA
PCGDPSNKDGCESCLEAYYSKCVNYCGPSCHVTCTSG

Transcript Sequence

Transcript ID

Os03t0700100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28063603:28064495:-1 gene:Os03g0700100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 38 description:Somatomedin B domain containing protein. (Os03t0700100-01)
Sequence

TGCATCTGCAATCCAGTGACAAAAACCTGCAAGTTGAAGTATCGCGTTTACTGCCTATAA
ATAGCGCTGGTAATCTGCCACAAATCCAACACATACGCATATCTGCATCCCCTGTTCTTC
TCTCCTGTGACTTGCTTGATCCACATCAAATCCAACGACAACACCAACAGACCAAATAAT
GGCTGCTGCTTCCGGCCGCCGCCGTGCCGCGGCCTTCGCCGTCGTGATCTGCGCCGCCCT
GCTGCTGCTGTCCTCCGCCGTGGAGCGGGCGGCGGCGCAGGTGCCCTGCAGCCAGTGCGA
CCAGGCGTGCAAGGAATCGTGCAAGGGCTACGGGCGCGACTCGTCGTCGTGCAGCGCCCC
CTGCGGCGACCCCTCCAACAAGGACGGATGCGAGAGCTGCCTGGAGGCGTACTACTCCAA
ATGCGTCAACTACTGTGGCCCGTCCTGCCATGTCACCTGCACCAGCGGCTGAAAAGCCCA
GCCGGCCGTCGTCTTGGGCCTTGTTTGGATACTCCGTAATAATAATTAGCCCTCCCAAAT
TTTACTATTTAAGAGTATTAAATATAAATTACTGATAAAACTCATTTCATAATCTCTGGA
CTAATTTTATATTCGTCTTGCAAATTAGCTTGGTGGTTATAAAATAAGTTTTATCAGTAA
TTTATATTTAATACTTCTAAATAGCAAGATTTTAGAGGGCTAATTATTAGCCCGGAGGAT
CCTAAGGCCTTGATGTGTGTCATGAGGATGCACCGTGCATGTACACGTACTGTTAGTATT
GTATACTAGCAATAGTTAGTACTGCTATTTCGAATAAGCTAGCTGGCGTGGATGTACAGT
ATATGGCTATATGCCGACCGGCTCTGTATTTCATATATTGTGGTCAATGCTTC