Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0699400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:28039420:28042378:-1 gene:Os03g0699400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Silencing group B protein. (Os03t0699400-01)
Sequence	ATGACGACCATCCGCCGGTTCTGCTGCGACGACCTCCTCCGCTTCTCCTCCGTCAACCTC GACCACCTCACCGAGACCTTCAACATGTCCTTCTACATGACGTACATGGCTCGCTGGCCC GACTACTTCCACGCCGCCGTCAGCCCCGGGGACCGCGTCATGGGATACATCATGGGTAAG GTTGAAGGACAAGGTGAATCTTGGCATGGACATGTTACAGCAGTGTCTGTTGCCACAGAA TTTCGGAGGCAGAAGCTAGCCAAAAAACTTATGAACCTTTTGGAGGAAATCAGTGACAAG ATGGATAAGGCCTACTTTGTGGATCTCTTCGTAAGAGCATCTAACATGCCAGCAATAAGG ATGTATGAAAAGCTTGGCTATGTGGTTTATCGAAGGGTGCTCCGCTATTACTCAGGGGAA GAAGATGGCCTTGATATGAGGAAAGCTTTGTCACAAGACGTTGAAAAGAAGTCCATCATA CCACTGAAGAGACCAATAACACCGGATGAACTTGAATATGATTGA

Peptide Sequence

PEP ID	Os03t0699400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:28039420:28042378:-1 gene:Os03g0699400 transcript:Os03t0699400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Silencing group B protein. (Os03t0699400-01)
Sequence	MTTIRRFCCDDLLRFSSVNLDHLTETFNMSFYMTYMARWPDYFHAAVSPGDRVMGYIMGK VEGQGESWHGHVTAVSVATEFRRQKLAKKLMNLLEEISDKMDKAYFVDLFVRASNMPAIR MYEKLGYVVYRRVLRYYSGEEDGLDMRKALSQDVEKKSIIPLKRPITPDELEYD

Transcript Sequence

Transcript ID	Os03t0699400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:28039420:28042378:-1 gene:Os03g0699400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Silencing group B protein. (Os03t0699400-01)
Sequence	ATTAGGCCCGGAGGAGCGCCTATCTGAAGTCCAACACCCGTCCAGGCACCGGCTCTCCGC CGCTCGAAGCTTCTCTCTTCTCACCGGAATCTCGAGAGCACAGCGCCGCCCCGACGACGA GATCCCTCACCGGCGCCGCCGCCGCCGCGGCCAGGAGGCCGAGGGGCCATGACGACCATC CGCCGGTTCTGCTGCGACGACCTCCTCCGCTTCTCCTCCGTCAACCTCGACCACCTCACC GAGACCTTCAACATGTCCTTCTACATGACGTACATGGCTCGCTGGCCCGACTACTTCCAC GCCGCCGTCAGCCCCGGGGACCGCGTCATGGGATACATCATGGGTAAGGTTGAAGGACAA GGTGAATCTTGGCATGGACATGTTACAGCAGTGTCTGTTGCCACAGAATTTCGGAGGCAG AAGCTAGCCAAAAAACTTATGAACCTTTTGGAGGAAATCAGTGACAAGATGGATAAGGCC TACTTTGTGGATCTCTTCGTAAGAGCATCTAACATGCCAGCAATAAGGATGTATGAAAAG CTTGGCTATGTGGTTTATCGAAGGGTGCTCCGCTATTACTCAGGGGAAGAAGATGGCCTT GATATGAGGAAAGCTTTGTCACAAGACGTTGAAAAGAAGTCCATCATACCACTGAAGAGA CCAATAACACCGGATGAACTTGAATATGATTGAAGTTAACTTCTAGTTACTTCCAGTGTT TTGTTTGCTGTTAACTTCTATGGTGATTTGCCAAGTGTCTTTTGTCTCCAGTAGTATCAT CTAGTGATCGTGCTGTTTTCTTTTCTGCATCCTGATAAGATTCAACATAACTCTGAAGGT GATTCTATCGTTTTGGAATGGAATGCAGCACTTAGTAAGTAGTCT