Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0699200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:28029406:28034964:1 gene:Os03g0699200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PES description:BRCT domain containing protein. (Os03t0699200-01)
Sequence

ATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGAAGTACATC
ACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGAAGCTATGC
ATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACCACAAGACC
TACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGAAGTTTAGA
GAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATAAAGATCTT
GCAGACAGATTATTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTCTTGAAAGA
TATCCAACTTTTGTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGGTGCATCTT
TTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTCATAATTGC
CGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGCGAAAGACA
TTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGATCACCTGG
CTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATGTGATGCTT
ACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTTACCATTCG
ATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTTCTGAGCTC
TATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAACCTGCTGGA
CTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATGAGTCTGAA
CTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGCTGATGCAT
CTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAATGCAGGAGT
TTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTCTCTTATTT
ATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTTTTGATGAG
ACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACGTTTTCCTC
TCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCATCATATTG
CCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCTTTGTGGAC
AATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGCAAGCTGCT
GCTCAAAGCCAGGTGTTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAAATTCACTG
GTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGAGGAAGTTG
GAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAAAGACCTTC
TCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTAAAGAAGCT
GACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACATTTCCAAG
ACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACCAGGAAAGG
AAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCAGTGCTTCG
GCCAAAGGTCGCTGA

Peptide Sequence

PEP ID

Os03t0699200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:28029406:28034964:1 gene:Os03g0699200 transcript:Os03t0699200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PES description:BRCT domain containing protein. (Os03t0699200-01)
Sequence

MPKHYRPAGKKKEGNAAKYITRTKAVKYLQISLATFRKLCILKGVFPRDPKKKVEGNHKT
YYHMKDIAFLAHDPLIEKFREIKVHRKKVKKAFAKKNKDLADRLLNRPPTYKLDRLILER
YPTFVDALRDLDDCLTMVHLFAALPAVEGERVQVQRIHNCRRLSHEWQAYISRTHSLRKT
FISVKGIYYQAEVQGQKITWLTPHALQQVLTDDVDFNVMLTFLEFYETLLGFINFKLYHS
INVNYPPVLDPRLEALASELYALCRYMSSGRVPGNSEPAGLIEDKEGEDNKESSKTDESE
LRLAQLQHQLPTNEPGALMHLVQESTAADADDADAKECRSLFKNLKFYLSREVPRESLLF
IIPAFGGTVSWEGEGAPFDETDEDITHQIVDRPTQSHVFLSREYVQPQWIYDCVNARIIL
PTEGYIVGRVPPPHLSPFVDNDAEGYIPEYAETIKRLQAAAQSQVLPLPSLGDEDMENSL
VEAIIDRSESNEIADKKRKLEMLEKQYHDELRMEYEGKTFSNRTADNQPDVVDKSDTKEA
DDHMEDSHKQAEKDAADISKTLMSRKQRGLLQAIEINQERKKDKVNLLKKRKKNADSSAS
AKGR

Transcript Sequence

Transcript ID

Os03t0699200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28029406:28034964:1 gene:Os03g0699200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PES description:BRCT domain containing protein. (Os03t0699200-01)
Sequence

CCTCTTCGGCCTCTCCTTTCCCCCGCTCCCCTTCCCCGAGGAGCCACGCCGCCGCCGCCG
CCGCCGCCATGCCGAAGCACTACCGGCCTGCGGGCAAGAAGAAGGAGGGGAACGCGGCGA
AGTACATCACCAGGACCAAGGCGGTGAAGTACCTGCAGATTAGCCTCGCAACCTTCAGGA
AGCTATGCATTCTCAAGGGCGTCTTTCCCCGGGATCCAAAGAAGAAGGTGGAAGGGAACC
ACAAGACCTACTACCACATGAAGGATATTGCCTTCCTGGCCCATGATCCCTTGATTGAGA
AGTTTAGAGAAATCAAGGTCCACAGGAAGAAGGTCAAAAAGGCGTTTGCTAAGAAAAATA
AAGATCTTGCAGACAGATTATTGAACCGACCACCAACTTACAAACTTGACAGGCTTATTC
TTGAAAGATATCCAACTTTTGTTGATGCTCTTCGTGACTTGGATGATTGCCTAACAATGG
TGCATCTTTTTGCTGCGTTGCCTGCTGTTGAAGGTGAACGTGTGCAAGTTCAGCGGATTC
ATAATTGCCGCAGGTTGAGCCATGAATGGCAAGCATATATATCTCGAACTCATTCCCTGC
GAAAGACATTTATATCCGTCAAGGGCATATATTATCAAGCTGAAGTTCAAGGTCAAAAGA
TCACCTGGCTAACTCCACATGCTCTTCAGCAAGTTTTAACTGATGACGTTGACTTCAATG
TGATGCTTACCTTTTTGGAATTCTATGAGACACTTCTGGGATTTATAAACTTCAAGCTTT
ACCATTCGATAAATGTAAATTATCCTCCTGTTCTGGATCCTCGTTTGGAAGCTTTAGCTT
CTGAGCTCTATGCGTTGTGCCGGTACATGTCTTCTGGAAGAGTACCTGGAAATTCAGAAC
CTGCTGGACTAATTGAAGACAAAGAGGGTGAAGACAATAAAGAGAGCTCAAAAACAGATG
AGTCTGAACTCAGATTGGCACAACTTCAACACCAGCTCCCAACTAATGAACCTGGAGCGC
TGATGCATCTTGTACAAGAATCTACTGCTGCTGATGCAGACGACGCTGATGCCAAAGAAT
GCAGGAGTTTATTCAAAAACCTGAAGTTCTACCTAAGTCGTGAGGTGCCTAGGGAATCTC
TCTTATTTATCATTCCAGCATTTGGTGGTACCGTTTCATGGGAAGGAGAAGGAGCTCCTT
TTGATGAGACAGATGAAGACATCACTCATCAGATTGTTGATAGACCGACCCAAAGCCACG
TTTTCCTCTCTAGGGAGTATGTTCAACCACAGTGGATATATGATTGCGTGAATGCTCGCA
TCATATTGCCGACAGAAGGTTATATTGTCGGGAGGGTGCCTCCACCACATTTATCTCCCT
TTGTGGACAATGATGCAGAGGGTTACATTCCTGAGTATGCAGAGACCATTAAGAGGCTGC
AAGCTGCTGCTCAAAGCCAGGTGTTGCCTCTGCCAAGTTTAGGGGACGAAGATATGGAAA
ATTCACTGGTAGAGGCAATTATTGATCGATCAGAGTCTAATGAAATTGCTGACAAGAAGA
GGAAGTTGGAGATGCTAGAGAAGCAGTACCACGATGAGCTGAGGATGGAATACGAAGGAA
AGACCTTCTCAAATAGGACGGCAGATAACCAACCAGATGTTGTGGACAAAAGTGATACTA
AAGAAGCTGACGATCATATGGAGGACTCTCATAAACAAGCCGAGAAGGATGCTGCTGACA
TTTCCAAGACCCTTATGTCTCGCAAGCAGAGAGGCCTTCTTCAAGCAATTGAGATTAACC
AGGAAAGGAAAAAGGACAAGGTGAACTTGCTGAAGAAAAGGAAAAAGAATGCTGATTCCA
GTGCTTCGGCCAAAGGTCGCTGAGGCTCGAACTTCATTTGCTCCATGCTGTATCTGTTTT
GACAAATTGTTCATCGGTCGCTGCTTCTGTGGAGTTGCTGCCATGATCTGCACACCTACG
TATTCTTATGCATGATAAGCAGCTCCATTTTGATGTTTAGGTGTTTTACATGGGCTTTAA
GAATATGCCCAGATACCTCAGTAGAAAATTTTGAGCTATTTACCTAGTGTCCAAAGTGTG
TTCCCTGATGATTAGTAGCTATTACTCTTCC