Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0698900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:28015015:28018832:-1 gene:Os03g0698900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline phytoceramidase family protein. (Os03t0698900-01);Alkaline phytoceramidase family protein. (Os03t0698900-02)
Sequence

ATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGC
GAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTT
CCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAA
CGATTCAGTGTCCTGCACATATCCAATATGATACTTGCTATCGGCAGTATGATCTTCCAT
GCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTGTGGGAGATTCTC
CTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTC
CTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTA
TTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTAC
ATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGC
TTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTAC
GTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCA
AACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCAC
CTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGA

Peptide Sequence

PEP ID

Os03t0698900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:28015015:28018832:-1 gene:Os03g0698900 transcript:Os03t0698900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline phytoceramidase family protein. (Os03t0698900-01);Alkaline phytoceramidase family protein. (Os03t0698900-02)
Sequence

MADSMVSSFWGPVTSTTELCEENYAHSSYIAEFYNTVSNVPCVLLALVGLVNALRQGFEK
RFSVLHISNMILAIGSMIFHATLQHVLQQSDETPMVWEILLYLYVLYSPDWHYRSTMPTF
LFLYGAAFAVVHFLVRFQVVFKLHYVGLCLLCIPRMYKYYIQTKDMAAKRLAKLWVLTLS
LATLCWLFDRMFCKKLSHWYVNPQGHAWWHILMGFNSYFANTFLMFCRAQQRGWEPKITH
LFGFLPYVKIQKPQKRE

Transcript Sequence

Transcript ID

Os03t0698900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:28015015:28018832:-1 gene:Os03g0698900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline phytoceramidase family protein. (Os03t0698900-01);Alkaline phytoceramidase family protein. (Os03t0698900-02)
Sequence

AACAAAAGGAAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCG
CCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTT
AGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAA
ATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTC
AACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAA
TACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCG
CCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGATACTTGCTATCGG
CAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAAT
GGTGTGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAG
CACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGT
GCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACG
GATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTG
GGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAA
GCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATT
TAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGA
GCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAA
GAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCTC
ATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGG
ACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTA
CCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTAT
TTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTG
TTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCC