Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0696300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:27890692:27894467:1 gene:Os03g0696300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to Nuclear transcription factor Y subunit A-1. (Os03t0696300-01);Similar to nuclear transcription factor Y subunit A-1. (Os03t0696300-02)
Sequence	GCGAGCATGGAGTCGAGGCCGGGGGGAACCAACCTCGTGGAGCCGAGGGGGCAGGGCGCG CTGCCGTCCGGCATACCGATCCAGCAGCCGTGGTGGACGACCTCCGCCGGGGTCGGGGCG GTGTCGCCCGCCGTCGTGGCGCCGGGGAGCGGTGCGGGGATCAGCCTGTCGGGCAGGGAT GGCGGCGGCGACGACGCGGCAGAGGAGAGCAGCGATGACTCACGAAGATCAGGGGAGACC AAAGATGGAAGCACTGATCAAGAAAAGCATCATGCAACATCGCAGATGACTGCTTTGGCA TCAGACTATTTAACACCATTTTCACAGCTGGAACTAAACCAACCAATTGCTTCGGCAGCA TACCAGTACCCTGACTCTTACTATATGGGCATGGTTGGTCCCTATGGACCTCAAGCTATG TCCGCACAGACTCATTTCCAGCTACCTGGATTAACTCACTCTCGTATGCCGTTGCCTCTT GAAATATCTGAGGAGCCTGTTTATGTAAATGCTAAGCAATATCATGGAATTTTAAGACGG AGGCAGTCACGTGCGAAGGCTGAACTTGAGAAAAAAGTTGTTAAATCAAGAAAGCCCTAT CTTCATGAGTCTCGTCATCAACATGCTATGCGAAGGGCAAGAGGAACGGGTGGACGCTTC CTGAACACAAAGAAAAATGAAGATGGTGCTCCCAGTGAGAAAGCCGAACCAAACAAAGGA GAGCAGAACTCCGGGTATCGCCGGATCCCTCCTGACTTACAGCTCCTACAGAAGGAAACA TGA

Peptide Sequence

PEP ID	Os03t0696300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:27890692:27894467:1 gene:Os03g0696300 transcript:Os03t0696300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to Nuclear transcription factor Y subunit A-1. (Os03t0696300-01);Similar to nuclear transcription factor Y subunit A-1. (Os03t0696300-02)
Sequence	ASMESRPGGTNLVEPRGQGALPSGIPIQQPWWTTSAGVGAVSPAVVAPGSGAGISLSGRD GGGDDAAEESSDDSRRSGETKDGSTDQEKHHATSQMTALASDYLTPFSQLELNQPIASAA YQYPDSYYMGMVGPYGPQAMSAQTHFQLPGLTHSRMPLPLEISEEPVYVNAKQYHGILRR RQSRAKAELEKKVVKSRKPYLHESRHQHAMRRARGTGGRFLNTKKNEDGAPSEKAEPNKG EQNSGYRRIPPDLQLLQKET

Transcript Sequence

Transcript ID	Os03t0696300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:27890692:27894467:1 gene:Os03g0696300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to Nuclear transcription factor Y subunit A-1. (Os03t0696300-01);Similar to nuclear transcription factor Y subunit A-1. (Os03t0696300-02)
Sequence	ACTGGATCCTGATTGGCGTTGCGGCCAATCAGGATCCTGCTGGATCCTGATTGGATCCTG ATTGGCGTTGCGGCCGTGTCTCTACTGTTGTTGTTGTTGTGTTTTTTTTTTCTTTTTTAC CTTTTTTTGCCGCCTTGGTTTTGATGCGGAGTCTGGATGTTTCTACTTTTGGATGGGGTT TTTTTACCTTACCCGACCGAATTCGTGGGTGGATTGGATGCGGTTCATGGAAGGGAACGG GATCTTGGTCGGCTACTCGGATGGGGGGTTTGCCGGCCGGTTGGGATTTCGGGAACCGGA TCGAGGAAGAGGCGGAGGAGAATTGATCCGCGGCGGCGGCGGCGGAGGAGGAGGAGAGAA TATGTGGTGATTTTCATCTGAGCCCGGTTGCAGAAGTCCAACTGTATCGGAGAATCTTAC TCGGTTCGTACTACAGTCCCCCACGCTGGTATTCAAGGAATCTTCTCTGGATGGACCAGT TCTTGGTTGGTCCCGGTTCTTTCATGTCCAGTTCCCCATGGTGGTTCAGTTGGCAGTTGT GCCCTAGTTGTTGTAGGAGTAATTGTCGGTGGCTTTAAATGGTTCATGCTCGTCAGTTCT TCCGAGCATTCCGAGGTGAGCGAGCATGGAGTCGAGGCCGGGGGGAACCAACCTCGTGGA GCCGAGGGGGCAGGGCGCGCTGCCGTCCGGCATACCGATCCAGCAGCCGTGGTGGACGAC CTCCGCCGGGGTCGGGGCGGTGTCGCCCGCCGTCGTGGCGCCGGGGAGCGGTGCGGGGAT CAGCCTGTCGGGCAGGGATGGCGGCGGCGACGACGCGGCAGAGGAGAGCAGCGATGACTC ACGAAGATCAGGGGAGACCAAAGATGGAAGCACTGATCAAGAAAAGCATCATGCAACATC GCAGATGACTGCTTTGGCATCAGACTATTTAACACCATTTTCACAGCTGGAACTAAACCA ACCAATTGCTTCGGCAGCATACCAGTACCCTGACTCTTACTATATGGGCATGGTTGGTCC CTATGGACCTCAAGCTATGTCCGCACAGACTCATTTCCAGCTACCTGGATTAACTCACTC TCGTATGCCGTTGCCTCTTGAAATATCTGAGGAGCCTGTTTATGTAAATGCTAAGCAATA TCATGGAATTTTAAGACGGAGGCAGTCACGTGCGAAGGCTGAACTTGAGAAAAAAGTTGT TAAATCAAGAAAGCCCTATCTTCATGAGTCTCGTCATCAACATGCTATGCGAAGGGCAAG AGGAACGGGTGGACGCTTCCTGAACACAAAGAAAAATGAAGATGGTGCTCCCAGTGAGAA AGCCGAACCAAACAAAGGAGAGCAGAACTCCGGGTATCGCCGGATCCCTCCTGACTTACA GCTCCTACAGAAGGAAACATGAAGTAGCGGCTCGAAACCTAGAACAGTGGCTTCTGTCCA CCGGCATTCACTCTTGAGGGTGGATTCTTGCTCCAGAATTGTGCTGCCATCTTTCAAATG ATCTTCATCGTGCAAAGTAATTATATGTACATTCCTCTGAATGATCTATGCACCAATTGT TGATCCTGGCAGGGTAATAATCTGGATGTATTGAGTCCATCACAGTGCGAATGTCACGGG TAGATCTGCTGTTTTCAGGCAATTCATTCTTGGCTTTCTATCCCACCCGTTGTTGTTGCA AGTTAAGCTAGCAGTACTTGTCTCAGTGTCCGTGAGACGTTTGTGTAAGATTAGGTTAAA CTAGAAGTTGTAATGCTGTATTAAGTGTTTGTATTTCTAATATGAACCGTAACAAGGCCA GAGCAGAACTCGTTATACATACAAAAATTGATGGCCAGGTCAGTGTTACCGTATTATTAT GCAATGGCAGAAGCTTGCATAAGGCGTGGTGCCACTCGTTGCTTTGCTGTATGTTTTTGA GTTTCATTCGATTTATTTTCACTGTTGAGTTTGTGGGT