Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0696000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:27877943:27882348:1 gene:Os03g0696000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os03t0696000-01)
Sequence

ATGGCGAAGGCGCAGCCTCCGCCTGCGCGGGAGCCCCTGCTCCCCTCCTCCGCCTCCCCG
CCACCCTATCTGGACGCCCGCGCCGGCGCCGACGCCAACGCGGACTCGTACGTCCTCCTC
GTCCCCGTGCGGCTCCGCCGGCTGCGGCGCGGGTGCCGCTGCCGCTGCCTCGGCCCGCTC
CTCTCCACGCTCGCGCTGCTCTCCCTCGCCGGGTTCCTCCTCTGGCCCGCCGACCCGGAC
GTCAGCGTGGCGCGCCTCCGCCTCGCGCACGTCTCCGTCTCCGCGCGCCCCACCGTCCGC
GTCACCATCTCCGCCGCGCTCAAGGTCCGCGTCCGGAACCCGGACCTCTTCGCGCTCGAC
TACGGCCGCCTCGACGTCGACATCGGCTACCGCGGCGCGCCGCTCGGGCGCGTCACCTCC
GGCGGCGGGCGCGTCCGCGCGCGCGCCGTCTCCTACATCGACGCCAACCTCAGCCTCGAC
GGCATAAGCGTCGTGGAGGACGCGATCTACCTCCTCGAGGACCTCGCGCGGGGATCCGTG
CCCTTCGACACCGTCGCTGAGGTCGAGGGCCACGTTCACTTGTTCTTCCTCAGCATCCCT
GTCAAGGGGAGAATATCTTGTGTGGTGCATATTAACCCGCACAATCAAACTATAGTACAC
CAAGACTGCTATCCGGATTGA

Peptide Sequence

PEP ID

Os03t0696000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:27877943:27882348:1 gene:Os03g0696000 transcript:Os03t0696000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os03t0696000-01)
Sequence

MAKAQPPPAREPLLPSSASPPPYLDARAGADANADSYVLLVPVRLRRLRRGCRCRCLGPL
LSTLALLSLAGFLLWPADPDVSVARLRLAHVSVSARPTVRVTISAALKVRVRNPDLFALD
YGRLDVDIGYRGAPLGRVTSGGGRVRARAVSYIDANLSLDGISVVEDAIYLLEDLARGSV
PFDTVAEVEGHVHLFFLSIPVKGRISCVVHINPHNQTIVHQDCYPD

Transcript Sequence

Transcript ID

Os03t0696000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27877943:27882348:1 gene:Os03g0696000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os03t0696000-01)
Sequence

AATCAACCTCCTCTTCCTTCCTAAGCTACGCCAAAGCCCACTCCCCGCAACCACCCCCAC
ACCCCCACCACCGGCGACCACCGCCCCCACCAACCTCGCCCTCGCCCTCCCATGGCGAAG
GCGCAGCCTCCGCCTGCGCGGGAGCCCCTGCTCCCCTCCTCCGCCTCCCCGCCACCCTAT
CTGGACGCCCGCGCCGGCGCCGACGCCAACGCGGACTCGTACGTCCTCCTCGTCCCCGTG
CGGCTCCGCCGGCTGCGGCGCGGGTGCCGCTGCCGCTGCCTCGGCCCGCTCCTCTCCACG
CTCGCGCTGCTCTCCCTCGCCGGGTTCCTCCTCTGGCCCGCCGACCCGGACGTCAGCGTG
GCGCGCCTCCGCCTCGCGCACGTCTCCGTCTCCGCGCGCCCCACCGTCCGCGTCACCATC
TCCGCCGCGCTCAAGGTCCGCGTCCGGAACCCGGACCTCTTCGCGCTCGACTACGGCCGC
CTCGACGTCGACATCGGCTACCGCGGCGCGCCGCTCGGGCGCGTCACCTCCGGCGGCGGG
CGCGTCCGCGCGCGCGCCGTCTCCTACATCGACGCCAACCTCAGCCTCGACGGCATAAGC
GTCGTGGAGGACGCGATCTACCTCCTCGAGGACCTCGCGCGGGGATCCGTGCCCTTCGAC
ACCGTCGCTGAGGTCGAGGGCCACGTTCACTTGTTCTTCCTCAGCATCCCTGTCAAGGGG
AGAATATCTTGTGTGGTGCATATTAACCCGCACAATCAAACTATAGTACACCAAGACTGC
TATCCGGATTGAGTTGCTAATGGCGTTCTAGCAATCGTCGCGTGTGAAGAGGTCATTTTA
AACTTCCCTTGGAGTGCTTTCAGCTGTTGTATAAATATGATCCATTTGGTTATGTACCAT
GGTTGTGCACTTGAGGCAAAACATTCTTTATCTTGCACTACGCTGGTAGACGGGTCGATT
GTAAATTTCTTAGCAGGCCTAAATACCATGGTTTTAAGTCATGTCTATACGATCAATCAG
TTACCCAAAGAGAAAAAAATTCCACATTGGC