Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0694500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:27812191:27815752:1 gene:Os03g0694500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os03t0694500-01)
Sequence

ATGGCCCCTGTGAAGGCTGAGGAGCTGGTGGCGTTCGTCCCCAAGGAGCAGTACGACGGC
GTCGACTACTGCATCACCAGCCCGCCGCCATGGCTGACGGCGGTGCTGTTGGCGTTCCAG
CACTACCTCGTCATGCTCGGCACCACCGTCATCGTCGCCACCATCCTCGTGCCCCTCATG
GGCGGCGGCCATGTGGAGAAGGCGATCGTGGTGCAGACCATCCTGTTCCTCGCCGGGATC
AACACGCTGCTGCAGGTGCACCTCGGGACGCGGCTCCCCGCCGTCATGGGCGCCTCCTAC
GCCTACATCTACCCGGCCGTCGCCATCATCCTAAGCCCTCGCTTCGCCATCGTCGTCGAC
CCCTTCGAGAGGTTCGTGTACACGATGAGGTCGCTGCAGGGCGCGCTGATCATCGCCGGC
GTCGTCCAGGCCATCATCGGGTTCTTCGGAATCTGGAGGATCTTCATAAGGTTCCTGAGC
CCACTCGCGGCGGTTCCGTTCGTGACGCTGTCCGCGCTCGGCCTCTTCTACTTCGCCTTC
CCCGGAGTCGCCAAGTGCATCGAGGTCGGCCTCCCGGCGCTCATCCTGCTCCTGCTCTTC
ACCGAGTACGCGGCGCATTTCTTCGCGAGGGGGAGCTTCCTGTTCGGGCGGTGCGCCGTG
CTGGCGACGGTGCTCGTCGTGTGGATCTACGCCGAGATCCTCACGGCGGCCGGCGCCTAC
AACGAGAGGTCCCTCGTGACGCAGTTCAGCTGCCGCGCCGACCGATCGGGGCTCATCCAT
GGCGCACCCTGGGTCAGGTTCCCTTACCCGTTCCAGTGGGGGTACCCCATCTTCTTCGCC
GACGATTGCTTCGTCATGATCGCTGCCTCTTTCGTCTCACTGATCGAGTCTACGGGCACG
TTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTGCCCGCCTTCAGTTTTCGCTCGT
GGAGTTGGCTGGCAGGGCATATCTACCATTCTGGACGGGATGTGTGGTACATTGACAGGA
TCAGTAGCTTCAGTTGAGAATGCAGGTCTGTTGGCCTTGACGCGAGTCGGAAGCAGAAGG
GTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTCGCTGTTCGGGAAATTTGGGGCA
ATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACTGTACTGCGTTCTCTTCGCTTAT
TCAGCTGCTGCAGGGCTCTGCTTCCTCCAGTACTGCAACCTCAACACACTGAGAACCAAG
TTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCATCCCACAGTACTTCAGGGAGTAC
GAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTCACCCGCTTTCAATGTCATCGTC
AACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCATCCTCGCCTACCTCCTGGACTGC
ACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAGGGGCTTCCATTGGTGGGAGAAG
TTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTTCTACTCTCTGCCGTATGGCCTC
AGCAAGTACTTCCCTTCGTTCTAG

Peptide Sequence

PEP ID

Os03t0694500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:27812191:27815752:1 gene:Os03g0694500 transcript:Os03t0694500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os03t0694500-01)
Sequence

MAPVKAEELVAFVPKEQYDGVDYCITSPPPWLTAVLLAFQHYLVMLGTTVIVATILVPLM
GGGHVEKAIVVQTILFLAGINTLLQVHLGTRLPAVMGASYAYIYPAVAIILSPRFAIVVD
PFERFVYTMRSLQGALIIAGVVQAIIGFFGIWRIFIRFLSPLAAVPFVTLSALGLFYFAF
PGVAKCIEVGLPALILLLLFTEYAAHFFARGSFLFGRCAVLATVLVVWIYAEILTAAGAY
NERSLVTQFSCRADRSGLIHGAPWVRFPYPFQWGYPIFFADDCFVMIAASFVSLIESTGT
LMAVTRYAGATFCPPSVFARGVGWQGISTILDGMCGTLTGSVASVENAGLLALTRVGSRR
VIKISALFMIFFSLFGKFGAIIASIPLPIFSALYCVLFAYSAAAGLCFLQYCNLNTLRTK
FILSISLFLGLSIPQYFREYEVFYVFGPVHTHSPAFNVIVNVIFSSPATVAAILAYLLDC
THTYWDGPVWKDRGFHWWEKFKSYRHDPRSEEFYSLPYGLSKYFPSF

Transcript Sequence

Transcript ID

Os03t0694500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27812191:27815752:1 gene:Os03g0694500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os03t0694500-01)
Sequence

CTCCTCCCCTTTCCTCTCTTCCTCATCCGCTCTCTCTCTCTCTCGTCGTCGACCGCCGCC
GTCTGTCGCCGGAGTGGGGGCCATGGCCCCTGTGAAGGCTGAGGAGCTGGTGGCGTTCGT
CCCCAAGGAGCAGTACGACGGCGTCGACTACTGCATCACCAGCCCGCCGCCATGGCTGAC
GGCGGTGCTGTTGGCGTTCCAGCACTACCTCGTCATGCTCGGCACCACCGTCATCGTCGC
CACCATCCTCGTGCCCCTCATGGGCGGCGGCCATGTGGAGAAGGCGATCGTGGTGCAGAC
CATCCTGTTCCTCGCCGGGATCAACACGCTGCTGCAGGTGCACCTCGGGACGCGGCTCCC
CGCCGTCATGGGCGCCTCCTACGCCTACATCTACCCGGCCGTCGCCATCATCCTAAGCCC
TCGCTTCGCCATCGTCGTCGACCCCTTCGAGAGGTTCGTGTACACGATGAGGTCGCTGCA
GGGCGCGCTGATCATCGCCGGCGTCGTCCAGGCCATCATCGGGTTCTTCGGAATCTGGAG
GATCTTCATAAGGTTCCTGAGCCCACTCGCGGCGGTTCCGTTCGTGACGCTGTCCGCGCT
CGGCCTCTTCTACTTCGCCTTCCCCGGAGTCGCCAAGTGCATCGAGGTCGGCCTCCCGGC
GCTCATCCTGCTCCTGCTCTTCACCGAGTACGCGGCGCATTTCTTCGCGAGGGGGAGCTT
CCTGTTCGGGCGGTGCGCCGTGCTGGCGACGGTGCTCGTCGTGTGGATCTACGCCGAGAT
CCTCACGGCGGCCGGCGCCTACAACGAGAGGTCCCTCGTGACGCAGTTCAGCTGCCGCGC
CGACCGATCGGGGCTCATCCATGGCGCACCCTGGGTCAGGTTCCCTTACCCGTTCCAGTG
GGGGTACCCCATCTTCTTCGCCGACGATTGCTTCGTCATGATCGCTGCCTCTTTCGTCTC
ACTGATCGAGTCTACGGGCACGTTGATGGCGGTGACGAGATATGCAGGGGCAACGTTCTG
CCCGCCTTCAGTTTTCGCTCGTGGAGTTGGCTGGCAGGGCATATCTACCATTCTGGACGG
GATGTGTGGTACATTGACAGGATCAGTAGCTTCAGTTGAGAATGCAGGTCTGTTGGCCTT
GACGCGAGTCGGAAGCAGAAGGGTTATAAAGATCTCAGCCTTGTTCATGATCTTCTTCTC
GCTGTTCGGGAAATTTGGGGCAATCATTGCATCAATCCCATTGCCAATCTTCTCTGCACT
GTACTGCGTTCTCTTCGCTTATTCAGCTGCTGCAGGGCTCTGCTTCCTCCAGTACTGCAA
CCTCAACACACTGAGAACCAAGTTCATCCTCAGCATCTCCCTGTTCTTGGGCCTGTCCAT
CCCACAGTACTTCAGGGAGTACGAGGTGTTCTACGTCTTCGGGCCAGTTCACACCCACTC
ACCCGCTTTCAATGTCATCGTCAACGTGATCTTCTCCTCGCCTGCGACGGTGGCCGCCAT
CCTCGCCTACCTCCTGGACTGCACGCACACCTACTGGGACGGCCCGGTGTGGAAGGACAG
GGGCTTCCATTGGTGGGAGAAGTTCAAGTCTTACAGGCATGACCCGAGGAGCGAGGAGTT
CTACTCTCTGCCGTATGGCCTCAGCAAGTACTTCCCTTCGTTCTAGGCCAAAGGATGGCG
AGAGGTAGAAGACGATGCAATCATCTGGAGCCTTTAGCTTCACTGCTGTGGCTGTTGCAT
GCAAAGCATTTTGGATATGAGATGTTGTGGATCTAATGAAATGAAACTTAGAATTTTGGA
TGGTATTACCTCTGTCAACTTGGGGGGGGGGATTCAGGGGCCTGGATGATCCTGCCATTG
ATTTTGATTTGGTTTTTGATCTCTGATCCAATTTGAACAGCAGAAGAATAGTAAACCTGC
C