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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0693700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:27779100:27780096:-1 gene:Os03g0693700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OXALATE OXIDASE 1 description:Similar to Oxalate oxidase 1 (EC 1.2.3.4) (Germin). (Os03t0693700-01)
Sequence

ATGGAGTGCTTCAAAACTACCCTAGCTGGGGTGGTGCTCGTCGTGCTGCTCCTGCAGCAG
GCGCCGGTGCTACGGGCCAACGACCCTGACCCTCTCCAAGACTTCTGCGTCGCCGACCTC
GACAGCGAGGTGACGTTGAACGGGTACCCGTGCAAGCCCACGCCGGCGGCCGGCGACGAG
TTCCTCTTCTCCTCCAGGTTAGCCACGGGCGGCGACGTGAACGCCAACCCCAACGGCTCC
AACGTCACGCAGCTCGACGTCGCGGGGTGGCCCGGGGTGAACACGCTCGGCGTGTCCATG
AACCGCATCGACTTCGCGCCCGGCGGCACCAACCCGCCGCACGTCCACCCGCGCGCCACC
GAGGTCGGCATCGTGCTACGCGGCGAGCTCCTCGTCGGCATCATCGGCAGCCTCGACACC
GGGAACAGGTACTACTCCAGGGTGGTCCGCGGCGGCGAGACGTTCGTCATCCCGCGGGGG
CTCATGCACTTCCAGTTCAACGTCGGCAAGACGGAGGCCACCATGGTGGTGTCCTTCAAC
AGCCAGAACCCTGGCATCGTCTTCGTCCCGCTCACATTGTTCGGCTCCAACCCACCCATC
CCGACGCCGGTGCTCGTCAAGGCGCTCCGGGTGGACGCCGGCGTCGTCGAGCTGCTTAAG
TCCAAGTTCACCGGTGGGTACTGA

Peptide Sequence

PEP ID

Os03t0693700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:27779100:27780096:-1 gene:Os03g0693700 transcript:Os03t0693700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OXALATE OXIDASE 1 description:Similar to Oxalate oxidase 1 (EC 1.2.3.4) (Germin). (Os03t0693700-01)
Sequence

MECFKTTLAGVVLVVLLLQQAPVLRANDPDPLQDFCVADLDSEVTLNGYPCKPTPAAGDE
FLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRAT
EVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFN
SQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGGY

Transcript Sequence

Transcript ID

Os03t0693700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27779100:27780096:-1 gene:Os03g0693700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OXALATE OXIDASE 1 description:Similar to Oxalate oxidase 1 (EC 1.2.3.4) (Germin). (Os03t0693700-01)
Sequence

ACCCAATTAGCAAAGTAGCTTCTATACTACTGCCTCTGCCAGGTGCCATTTCATTACTCA
AAGAAATTGAGCCGAGACCTGAGGAACATATACAAGAATTGGCTAGCTTTGCTCGTTGAT
TAGCAATGGAGTGCTTCAAAACTACCCTAGCTGGGGTGGTGCTCGTCGTGCTGCTCCTGC
AGCAGGCGCCGGTGCTACGGGCCAACGACCCTGACCCTCTCCAAGACTTCTGCGTCGCCG
ACCTCGACAGCGAGGTGACGTTGAACGGGTACCCGTGCAAGCCCACGCCGGCGGCCGGCG
ACGAGTTCCTCTTCTCCTCCAGGTTAGCCACGGGCGGCGACGTGAACGCCAACCCCAACG
GCTCCAACGTCACGCAGCTCGACGTCGCGGGGTGGCCCGGGGTGAACACGCTCGGCGTGT
CCATGAACCGCATCGACTTCGCGCCCGGCGGCACCAACCCGCCGCACGTCCACCCGCGCG
CCACCGAGGTCGGCATCGTGCTACGCGGCGAGCTCCTCGTCGGCATCATCGGCAGCCTCG
ACACCGGGAACAGGTACTACTCCAGGGTGGTCCGCGGCGGCGAGACGTTCGTCATCCCGC
GGGGGCTCATGCACTTCCAGTTCAACGTCGGCAAGACGGAGGCCACCATGGTGGTGTCCT
TCAACAGCCAGAACCCTGGCATCGTCTTCGTCCCGCTCACATTGTTCGGCTCCAACCCAC
CCATCCCGACGCCGGTGCTCGTCAAGGCGCTCCGGGTGGACGCCGGCGTCGTCGAGCTGC
TTAAGTCCAAGTTCACCGGTGGGTACTGATCTGACGATCCGAGAGTATTCTTACGCGGAT
CTAGGTCTCTGCTACTATAGTTGTGCGCAGTGTATGTTATTTGATTGAATAAACTTGTCG
TCGCCATCGCAGGCCACGAATGAAACTAAAATGTATTACTACTGCTTTCTTGTGCTTTTC
CCCTTCTAAATAAACTATACATAAATGGTATTTTGGT