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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0692700-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:27728304:27729046:-1 gene:Os03g0692700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pherophorin-S precursor. (Os03t0692700-01);Hypothetical conserved gene. (Os03t0692700-03);Similar to predicted protein. (Os03t0692700-04);Similar to predicted protein. (Os03t0692700-05)
Sequence

ATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGC
GCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCG
GAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAAC
GACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCAC
CTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTC
TCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCACCACCATCGTCGCCCAC
CCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCG
GACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCGCGGCTCCGCGGCGCCGCCGGGCTC
GCACGCCAGCTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAG

Peptide Sequence

PEP ID

Os03t0692700-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:27728304:27729046:-1 gene:Os03g0692700 transcript:Os03t0692700-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pherophorin-S precursor. (Os03t0692700-01);Hypothetical conserved gene. (Os03t0692700-03);Similar to predicted protein. (Os03t0692700-04);Similar to predicted protein. (Os03t0692700-05)
Sequence

MAMSPLTTILLLAAAVGATCATSATASAAPLHGIANDLLPEYGLPRGLIPETIASYTFDN
DTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYGTITGLSGIQAQKFFVWVSITTIVAH
PDQGTVEFRAGFISEALPESDFAEVPVCGAGARLRGAAGLARQLGLQLPTVAEV

Transcript Sequence

Transcript ID

Os03t0692700-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27728304:27729046:-1 gene:Os03g0692700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pherophorin-S precursor. (Os03t0692700-01);Hypothetical conserved gene. (Os03t0692700-03);Similar to predicted protein. (Os03t0692700-04);Similar to predicted protein. (Os03t0692700-05)
Sequence

ACACATAGGAGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCC
ATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGC
GCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCG
GAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAAC
GACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCAC
CTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTC
TCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCACCACCATCGTCGCCCAC
CCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCG
GACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCGCGGCTCCGCGGCGCCGCCGGGCTC
GCACGCCAGCTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAGCTTGTGT
GTATGAGTTGCTCCATGGCTTTCACTTTTCACATGGTGACATACGCATGTGTGTGCCCAT
GCTTGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAA
ATCCATCAAAATTTTCGTTCTGT