Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0690600-03
CDS Infomation	cds chromosome:IRGSP-1.0:3:27588808:27592738:-1 gene:Os03g0690600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSCL14 description:Similar to SCARECROW-like protein. (Os03t0690600-01);Similar to SCARECROW-like protein. (Os03t0690600-02);Similar to SCARECROW-like protein. (Os03t0690600-03)
Sequence	ATGGGTCTGGACAACAATTTCGGGGAGCTATCTGGCATGTTCTGTGGCTTGTCCTATGAT GGCTACACGGATCACGGCAGCCAGAGCGATTACTTCAGGTTCGCCGACCCGCAGCCGGCG ATCGTGCCCCAGATGGACGCCGGACCCAGCTCCGCCGCTTCCTCCACGGCGTCGAGGGCC GCCGTCAGCTCGGGGACCGACAACCCAGAGGACTGGGAGTTCATCTCGGACGAGTCGCTC AACTATATCAGCCGCATGCTCATGGAGGAGGACATTGATGAGAAGGTCAGCATGTACCAG GAGGAGTCCGCGGCGCTCCGCGCTGCTGCGAAGCCATTCTATGACATTCTTGGGCACAAG TTCCCGCCCTCCCCTGACCGCCAGCTGGTAGCTTGGCCCCTCGACAGCCCGAGTGAGAGT AGCACTAGCAGCTATCCACACTCCTTGGCTAGTTCTGTTACTAGCAGCAACATTAGTGGT GCGGTCGATAGCAGCCAACGCCGTTATGTTGGACACAGTGAGTATCGGAGCTTGTCTGGT CATTCTTCTCAACCGCCGGTTGGCCCATCAAGTGATGTTCGCAACGCTATGGAGACACTA GAAGATCCTTTGATTAGTAATGGCAGGATCCCTGAGTATTTGTTTGAGAGCTTTCCAACA TGGGATTTCAGGAGAGGTGTTGACGAGGCACAGAAGTTTCTCCCGGGTAGCGATAAGGTA GTGATTGATTTAGAGGCTGGTGGTGTTGCAAAACGTCAAGAAGCAGGGAAAGCTATTTCT CTGAATGTCAGCAAGGCAGAGGTTTTGAAGGTAAAGAAAAACAGACAGAGTGAAGACCTT GACGTGATGGAAGGACGGAATAGTAAACAGTCTGCATTTTGTTCTGATGAACCTGATTGG ATTGAGATGTTTGATGTTCTGCTTCGTCAAACTGAGAAGAAGGCAACTGATCTTCGAAAA ATGATGCGTTTTGAGGCTTCCAAGAATTCTCAAGTTGCTCAGCCAAAAGGACCAAGTGGG ACCCGATCACGGGGACGGAAGCCAACTAAGAAGGATGTGGTGGACCTTAGGACGCTACTC ATCCACTGTGCTCAGGCAGTGGCAGCTGATGACCGCCGGACTGCTAATGAGTTGTTAAAG CAAATAAGGCAGCATGCCAAGCCAAATGGAGATGGCTCCCAGAGATTGGCGTATTGCTTT GCAGATGGTCTTGAGGCTCGCTTGGCTGGAACAGGGAGCCAACTTTACCATAAACTTGTG GCAAAACGGACAACAGCCTCTGACATGCTCAAGGCATACCATCTTTACCTTGCAGCATGC CCATTCAAGAGGCTCTCACATTTTCTTTCAAATCAAACAATTTTGAGTTTGACAAAAAAT GCATCAAAGGTGCATATCATTGACTTTGGCATTTACTTCGGCTTCCAATGGCCGTGCCTG ATTAGACGTCTCTTCAAGAGGGAAGGTGGGCCACCAAAGCTGCGTATCACAGGGATTGAT GTACCTCAGCCAGGTTTCCGCCCAACTGAGCGCATCGAAGAGACAGGGCAGAGGCTTGCA GAATATGCTGAGAAGATTGGTGTCCCTTTTGAGTACCAAGGCATTGCATCAAAGTGGGAA ACAATCTGTGTTGAGGATCTCAATATTAAGAAAGATGAAGTAGTGATTGTTAATTGCTTG TATCGGTTCAGAAATCTTATTGATGAAACAGTTGCCATAGACAGTCCTAGGAATAGGGTG CTCAATACCATAAGGCAAGTGAACCCAGCAATTTTTATCCATGGCATTGTGAATGGGTCG TACAGCGTTCCCTTCTTCATCACACGGTTCCGTGAGGCATTATTTCATTTCTCTGCATTA TTTGACATGCTCGAGACAACTGTGCCACGGGATGATGCCCAGCGTGCACTAATTGAGAGA GATCTATTTGGCCGGGAAGCACTCAATGTGATTGCATGTGAAGGCTCAGACAGGGTCGAG AGACCGGAGACATACAAACAGTGGCAAGTGAGGAATCTGAGAGCTGGATTTGTCCAGTCT CCATTAAACCAAGACATTGTGCTGAAAGCCAAGGACAAAGTGAAAGACATCTATCACAAA GACTTTGTCATTGATGAAGACAGTGAATGGCTCCTTCAAGGGTGGAAAGGAAGGATAATC TATGCCATATCTACATGGAAGCCTAATAACAATTAG

Peptide Sequence

PEP ID	Os03t0690600-03
PEP Infomation	pep chromosome:IRGSP-1.0:3:27588808:27592738:-1 gene:Os03g0690600 transcript:Os03t0690600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSCL14 description:Similar to SCARECROW-like protein. (Os03t0690600-01);Similar to SCARECROW-like protein. (Os03t0690600-02);Similar to SCARECROW-like protein. (Os03t0690600-03)
Sequence	MGLDNNFGELSGMFCGLSYDGYTDHGSQSDYFRFADPQPAIVPQMDAGPSSAASSTASRA AVSSGTDNPEDWEFISDESLNYISRMLMEEDIDEKVSMYQEESAALRAAAKPFYDILGHK FPPSPDRQLVAWPLDSPSESSTSSYPHSLASSVTSSNISGAVDSSQRRYVGHSEYRSLSG HSSQPPVGPSSDVRNAMETLEDPLISNGRIPEYLFESFPTWDFRRGVDEAQKFLPGSDKV VIDLEAGGVAKRQEAGKAISLNVSKAEVLKVKKNRQSEDLDVMEGRNSKQSAFCSDEPDW IEMFDVLLRQTEKKATDLRKMMRFEASKNSQVAQPKGPSGTRSRGRKPTKKDVVDLRTLL IHCAQAVAADDRRTANELLKQIRQHAKPNGDGSQRLAYCFADGLEARLAGTGSQLYHKLV AKRTTASDMLKAYHLYLAACPFKRLSHFLSNQTILSLTKNASKVHIIDFGIYFGFQWPCL IRRLFKREGGPPKLRITGIDVPQPGFRPTERIEETGQRLAEYAEKIGVPFEYQGIASKWE TICVEDLNIKKDEVVIVNCLYRFRNLIDETVAIDSPRNRVLNTIRQVNPAIFIHGIVNGS YSVPFFITRFREALFHFSALFDMLETTVPRDDAQRALIERDLFGREALNVIACEGSDRVE RPETYKQWQVRNLRAGFVQSPLNQDIVLKAKDKVKDIYHKDFVIDEDSEWLLQGWKGRII YAISTWKPNNN

Transcript Sequence

Transcript ID	Os03t0690600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:27588808:27592738:-1 gene:Os03g0690600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSCL14 description:Similar to SCARECROW-like protein. (Os03t0690600-01);Similar to SCARECROW-like protein. (Os03t0690600-02);Similar to SCARECROW-like protein. (Os03t0690600-03)
Sequence	GTGTTCCTCCTCCACCGCTGTAGCTGTACCCCTCCTCCTCCTCCTCCTCTCCTCGATCCG CACGCACCGCCATCTCCGATCCGCAGCAGCAGCAGCAGCAGCAGCCGCGAGGCCCCGGAG CCACGCGCATCTCGCTCGCCGCCGGCGAGAAGGCCCCGGTAACCGGTGGGCCGCAGAGGG GGAAAAGGTTTTGGAGGGAGCGACGCCGCGTGCGTCCCCGTCTCGGCTGGGACCGAACCG GAGGTGTGCCATTTTTGGAGGCTATCGATGGGTCTGGACAACAATTTCGGGGAGCTATCT GGCATGTTCTGTGGCTTGTCCTATGATGGCTACACGGATCACGGCAGCCAGAGCGATTAC TTCAGGTTCGCCGACCCGCAGCCGGCGATCGTGCCCCAGATGGACGCCGGACCCAGCTCC GCCGCTTCCTCCACGGCGTCGAGGGCCGCCGTCAGCTCGGGGACCGACAACCCAGAGGAC TGGGAGTTCATCTCGGACGAGTCGCTCAACTATATCAGCCGCATGCTCATGGAGGAGGAC ATTGATGAGAAGGTCAGCATGTACCAGGAGGAGTCCGCGGCGCTCCGCGCTGCTGCGAAG CCATTCTATGACATTCTTGGGCACAAGTTCCCGCCCTCCCCTGACCGCCAGCTGGTAGCT TGGCCCCTCGACAGCCCGAGTGAGAGTAGCACTAGCAGCTATCCACACTCCTTGGCTAGT TCTGTTACTAGCAGCAACATTAGTGGTGCGGTCGATAGCAGCCAACGCCGTTATGTTGGA CACAGTGAGTATCGGAGCTTGTCTGGTCATTCTTCTCAACCGCCGGTTGGCCCATCAAGT GATGTTCGCAACGCTATGGAGACACTAGAAGATCCTTTGATTAGTAATGGCAGGATCCCT GAGTATTTGTTTGAGAGCTTTCCAACATGGGATTTCAGGAGAGGTGTTGACGAGGCACAG AAGTTTCTCCCGGGTAGCGATAAGGTAGTGATTGATTTAGAGGCTGGTGGTGTTGCAAAA CGTCAAGAAGCAGGGAAAGCTATTTCTCTGAATGTCAGCAAGGCAGAGGTTTTGAAGGTA AAGAAAAACAGACAGAGTGAAGACCTTGACGTGATGGAAGGACGGAATAGTAAACAGTCT GCATTTTGTTCTGATGAACCTGATTGGATTGAGATGTTTGATGTTCTGCTTCGTCAAACT GAGAAGAAGGCAACTGATCTTCGAAAAATGATGCGTTTTGAGGCTTCCAAGAATTCTCAA GTTGCTCAGCCAAAAGGACCAAGTGGGACCCGATCACGGGGACGGAAGCCAACTAAGAAG GATGTGGTGGACCTTAGGACGCTACTCATCCACTGTGCTCAGGCAGTGGCAGCTGATGAC CGCCGGACTGCTAATGAGTTGTTAAAGCAAATAAGGCAGCATGCCAAGCCAAATGGAGAT GGCTCCCAGAGATTGGCGTATTGCTTTGCAGATGGTCTTGAGGCTCGCTTGGCTGGAACA GGGAGCCAACTTTACCATAAACTTGTGGCAAAACGGACAACAGCCTCTGACATGCTCAAG GCATACCATCTTTACCTTGCAGCATGCCCATTCAAGAGGCTCTCACATTTTCTTTCAAAT CAAACAATTTTGAGTTTGACAAAAAATGCATCAAAGGTGCATATCATTGACTTTGGCATT TACTTCGGCTTCCAATGGCCGTGCCTGATTAGACGTCTCTTCAAGAGGGAAGGTGGGCCA CCAAAGCTGCGTATCACAGGGATTGATGTACCTCAGCCAGGTTTCCGCCCAACTGAGCGC ATCGAAGAGACAGGGCAGAGGCTTGCAGAATATGCTGAGAAGATTGGTGTCCCTTTTGAG TACCAAGGCATTGCATCAAAGTGGGAAACAATCTGTGTTGAGGATCTCAATATTAAGAAA GATGAAGTAGTGATTGTTAATTGCTTGTATCGGTTCAGAAATCTTATTGATGAAACAGTT GCCATAGACAGTCCTAGGAATAGGGTGCTCAATACCATAAGGCAAGTGAACCCAGCAATT TTTATCCATGGCATTGTGAATGGGTCGTACAGCGTTCCCTTCTTCATCACACGGTTCCGT GAGGCATTATTTCATTTCTCTGCATTATTTGACATGCTCGAGACAACTGTGCCACGGGAT GATGCCCAGCGTGCACTAATTGAGAGAGATCTATTTGGCCGGGAAGCACTCAATGTGATT GCATGTGAAGGCTCAGACAGGGTCGAGAGACCGGAGACATACAAACAGTGGCAAGTGAGG AATCTGAGAGCTGGATTTGTCCAGTCTCCATTAAACCAAGACATTGTGCTGAAAGCCAAG GACAAAGTGAAAGACATCTATCACAAAGACTTTGTCATTGATGAAGACAGTGAATGGCTC CTTCAAGGGTGGAAAGGAAGGATAATCTATGCCATATCTACATGGAAGCCTAATAACAAT TAGGGTATGGTCTGTGAGCTGTGCCTGGTTGCCCGTTAGCACTAGCAATTAACGAAGAAA AGTACCTTGCATTGGGCTACATGCGTATGTACAGGTCTGCTTATTGTTTTCCAAAGTACT GCTGCTCAGTTCAGTGATTTTCACATTTGTCCACTATTAGTTCAGTTCAGTACTTCTGTT CTTGATTTGGCCTTTGAGTTGATAATTTTTTTCAAGTTTAGAACAAGTAGGACATATGTC ACAATGGGTTAATTAATAAGCATAACTATCAGCATCAAAGTGGCATATGTCAGAAGACAA GTGTACTTTTTACATGCTATGCATTCCATGCGTTGGTGCAGACCGCAGAGCAGTTTCTGC CTTGCTTTTACCATATCTGTATCTATACTTATATATAACATGAAAAGCACTAGTTTCAAA CTTTTACCATACATGAAAGGTTGCTACAAGTAATCCTAGCAATTGGTTGGTTTGATCATT TTGTATTGAAGATGGATCCTTCATCCTTTCCCCCAACCCAAATCTCTCCAAAACAATTAA TTTGTACTTAATATATACTCTTTGCTCTGTCCAGATCTTCATGTGCACAGACAGTCCTAA ACGTCCGATCTGATGAATCTAATGGATGATATCCATTCCATGGTCCTGCCTTCCACAGAT AACTTAATAACAATAGTCGTCTACACTAATACCTGATAAATTAATTACCTTAATGGCCTA TATTCCTCCTAATCCTGCTCTGGACCAAAAAAAATCCCAGCCTCCTGAGAATACTCTGCA GCTGCATGGGTGCCAAAGTCCAATGCCTGTAACATCATAGGCATGAATTAATTTGACTTG GATACAATGGACATATATCAGCACATCTATGCATTACGACCTTCTGATCCTCATGAAGCC TTGGTTTTAACCGTTGCCGTACGAGTGCTTAGTGCTTGCCCCTGTTTAGCCTTTTTATAT TTTCCCTTTTCCAGGGATGTAATTTACAGGTTCCTTTTATTTGGATTGCATTGTACTAAT TACATAAATGTTTTAACGTTTTTTGGCCCAAC