Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0688200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:27458294:27463536:1 gene:Os03g0688200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0688200-01)
Sequence

ATGGCCGCCTCCCCCACCGGCTCCTCCTCCTCGGCCCCCGCCGCCGCGGCGGCGGCGGCG
GCCGAGGCCACCGACGGGCCGACCCTCAGCGTCGTCTCGAAGCGGCTCCGCGCGCTGCGG
AAGAAGCACAACCGGATCCTCCAGATGGAGGAGTCGCTCGCCGGCGGGAGGAAGCTCAAC
AAGGAGCAGGAGGGGGTGCTCCGATCCAAGCCCGCCGTCGTCGCGCTCATCGACGAGCTC
GAGCGGATGCGCGCCCCTCTCGCCGCCGCCCTCGCCGAGGAGCTCTCCTCCCGCCCCGCC
CCCTCCTCCTCCGCCGCGCCGCCGCCCCCCGCATCCTCCTCCGCCGCAGGCGCCGCGGAT
TCGTCCGTCGTCGAGGATCTCCTCGCGCTCATCTACTTCGGCACCCTCTTCGACCTCAAG
CCGCAGACCGAGTTCGTCGCCACCATGGTCGCGCGCGCGCAGGAGCGGGACTGCTGCATC
ACCTACGACTACGTCACGGAGGACGCCGCCGACCTGCTGCACCAGTCCGATCTCGACAAG
GTGTCTGCTCTGGCCGCCCTCGCCGCCTCGCGCCCTGCCGCGGCGGTGGGCGTCTCGCAC
CGCGACGCGCTCCAGTCCTGCGCGCAGCACGCCCGCCTCTGGCTTCGCCGTGCCGATGAG
CCAATCCACCCCGAATCCAGCATCACTTATGCAGCGGTTAGGGCGAAGTTGGACAAGATC
ATGGCTTCAGACTACTACACAGCGCAACCGGAGATGCCGGAGATGGGGGCTGCGGTCGAT
TTGTCGGCTGCTGTGCAGGAGAGCATGGTTGTGTCACCAGAGGCGCCGGCTGTGGAAGAG
AGCCAGGCTGAGGGACACAAGGATGAGAAGGAGGCTTCGGAGGCTACAGAAATCTACAAC
GATAATCAGCCTAATGTAGCTGATGCTCAGAATGTGGAGGATGAAGCCCCGGTGAATCCT
TCTGAAGAGTTCTCAGCAGCAGAGGTGGAGCAGGAGAAGTTTGAAGCAGATGTGGAGGAA
CAAGAGAGGAATGCAGATCAACAGTTCACTTCTCGACGGCCTTACCAGAACCAGCGCGGT
GGTGGTGGTCGTGGTGGTGGCAGGAGGGGTTACCAGAATGGAGGTCGTGGTGGACGTGGG
GGGCGAGGAATGGGCGGTGGCGGGTACCAGAATGGTCGTGGTGGTGGCGGCGGCGGTGGC
TACCAGAATGGCCGTGGTGGGGGTGAGGGTGGTGGGTACTACTATAATGAGCCTGGTTAC
TACCAGCAGAGGGGGTACAGCAACAGAGGCAGGGGTGGTCGCTCTGGTGGTGGCAACTCT
TATTACAACAATCAAGGTGGAGGTTCGCAGGGAGGTGGCCACGCCCATCCTGGGAGGGTT
GAGCTGGGCGCAAACGCTTAG

Peptide Sequence

PEP ID

Os03t0688200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:27458294:27463536:1 gene:Os03g0688200 transcript:Os03t0688200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0688200-01)
Sequence

MAASPTGSSSSAPAAAAAAAAEATDGPTLSVVSKRLRALRKKHNRILQMEESLAGGRKLN
KEQEGVLRSKPAVVALIDELERMRAPLAAALAEELSSRPAPSSSAAPPPPASSSAAGAAD
SSVVEDLLALIYFGTLFDLKPQTEFVATMVARAQERDCCITYDYVTEDAADLLHQSDLDK
VSALAALAASRPAAAVGVSHRDALQSCAQHARLWLRRADEPIHPESSITYAAVRAKLDKI
MASDYYTAQPEMPEMGAAVDLSAAVQESMVVSPEAPAVEESQAEGHKDEKEASEATEIYN
DNQPNVADAQNVEDEAPVNPSEEFSAAEVEQEKFEADVEEQERNADQQFTSRRPYQNQRG
GGGRGGGRRGYQNGGRGGRGGRGMGGGGYQNGRGGGGGGGYQNGRGGGEGGGYYYNEPGY
YQQRGYSNRGRGGRSGGGNSYYNNQGGGSQGGGHAHPGRVELGANA

Transcript Sequence

Transcript ID

Os03t0688200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27458294:27463536:1 gene:Os03g0688200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0688200-01)
Sequence

ACCCGTCTCGCCGCTCCATCTCCAAGCCCGAATCCCCAAAACCCTAGCCCACCCCCTGCC
GCCATGGCCGCCTCCCCCACCGGCTCCTCCTCCTCGGCCCCCGCCGCCGCGGCGGCGGCG
GCGGCCGAGGCCACCGACGGGCCGACCCTCAGCGTCGTCTCGAAGCGGCTCCGCGCGCTG
CGGAAGAAGCACAACCGGATCCTCCAGATGGAGGAGTCGCTCGCCGGCGGGAGGAAGCTC
AACAAGGAGCAGGAGGGGGTGCTCCGATCCAAGCCCGCCGTCGTCGCGCTCATCGACGAG
CTCGAGCGGATGCGCGCCCCTCTCGCCGCCGCCCTCGCCGAGGAGCTCTCCTCCCGCCCC
GCCCCCTCCTCCTCCGCCGCGCCGCCGCCCCCCGCATCCTCCTCCGCCGCAGGCGCCGCG
GATTCGTCCGTCGTCGAGGATCTCCTCGCGCTCATCTACTTCGGCACCCTCTTCGACCTC
AAGCCGCAGACCGAGTTCGTCGCCACCATGGTCGCGCGCGCGCAGGAGCGGGACTGCTGC
ATCACCTACGACTACGTCACGGAGGACGCCGCCGACCTGCTGCACCAGTCCGATCTCGAC
AAGGTGTCTGCTCTGGCCGCCCTCGCCGCCTCGCGCCCTGCCGCGGCGGTGGGCGTCTCG
CACCGCGACGCGCTCCAGTCCTGCGCGCAGCACGCCCGCCTCTGGCTTCGCCGTGCCGAT
GAGCCAATCCACCCCGAATCCAGCATCACTTATGCAGCGGTTAGGGCGAAGTTGGACAAG
ATCATGGCTTCAGACTACTACACAGCGCAACCGGAGATGCCGGAGATGGGGGCTGCGGTC
GATTTGTCGGCTGCTGTGCAGGAGAGCATGGTTGTGTCACCAGAGGCGCCGGCTGTGGAA
GAGAGCCAGGCTGAGGGACACAAGGATGAGAAGGAGGCTTCGGAGGCTACAGAAATCTAC
AACGATAATCAGCCTAATGTAGCTGATGCTCAGAATGTGGAGGATGAAGCCCCGGTGAAT
CCTTCTGAAGAGTTCTCAGCAGCAGAGGTGGAGCAGGAGAAGTTTGAAGCAGATGTGGAG
GAACAAGAGAGGAATGCAGATCAACAGTTCACTTCTCGACGGCCTTACCAGAACCAGCGC
GGTGGTGGTGGTCGTGGTGGTGGCAGGAGGGGTTACCAGAATGGAGGTCGTGGTGGACGT
GGGGGGCGAGGAATGGGCGGTGGCGGGTACCAGAATGGTCGTGGTGGTGGCGGCGGCGGT
GGCTACCAGAATGGCCGTGGTGGGGGTGAGGGTGGTGGGTACTACTATAATGAGCCTGGT
TACTACCAGCAGAGGGGGTACAGCAACAGAGGCAGGGGTGGTCGCTCTGGTGGTGGCAAC
TCTTATTACAACAATCAAGGTGGAGGTTCGCAGGGAGGTGGCCACGCCCATCCTGGGAGG
GTTGAGCTGGGCGCAAACGCTTAGCTTCCTAACTATTTTGCTTGGAGGAGTGAGTGTTAC
GCGAGGAGAGGACATAATATGTGGGAGCCATTTTGTTATTATAGAACTAACTTAGCCCTT
TATTATGTCAACATTTGCCCCCCTCAGAGTTCTTTTGTCACTCCAATGACTTTCATATGG
ATGGTTGGTTGATAATGCGGAATACTTTGGGGAAGTAGTTTAAGGTC