Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0686900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:27408274:27413223:1 gene:Os03g0686900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOURY ENDOSPERM 6 description:CBM48 domain-containing protein, Compound granule formation and starch synthesis (Os03t0686900-01)
Sequence	ATGCTCCCCCTCCTCCTCCCCCTCCCCGTGACCCCTCCTCCTCCTCTCCCCTCCCCAACC CTAACCCTAGCCCCCGCCTCCGCTCCTCGCCGACGCCTCGTCCTCCTCGCCGCCGCGGCG CCGCACCACCACCATCACCACCGCCGCCGCCGCGTCTACCGTCGCCAGCGCGCGGCGCCG ACGCAGACGCGGGCGCCGAGGAGGACGTTGTCGGCGTCCAATGCGGCCCGCGGGGAGGAG GACCTCGAGGAGGCGATCTACGAGTTCATGCGGCGGTCCGACAAGCCGGGGGCGTTCCCC ACCCGCGCCGAGCTCGTCGCCGCGGGGAGGGCCGACCTCGCCGCCGCCGTGGACGCCTGC GGCGGCTGGCTCTCGCTCGGGTGGTCCTCCGGTGGCGCGGAGGCAGGCAGGGCCTCCTCG TCGGTCGGCGTGCACCCTGACTACCCTCCCGAGGCGGGGGCGGCGGCGGCGGCGGGGGGC GCCTCCGACCTAGCGCAGGGAGCCGTGTGGGCGTCGTCCAGGGAGGCGGAAGCTTCGCCG TCCGGGCGCCAGCCGGAGACGGAGGAGGAGGAGACGGAGACGAAATTTGGGACTGGGTTG GACGGGATGCTTACCAGGCTGCAGAGGGAAAGGGAGAGGGTCCGGCCGCCGCTCCCACGG AGCAGCGATGGAGCGGGAGGGGAACGCGACAATGTTGCTTTAATGGGTCAGAGTGGAGCA CCCAGTCACTCTGCAACTGGTGGCAGGTACACTCCAAAGGTACCTGATAATGGAAATATA CATAGTTATCATCCTCAAAATGGAGCACTAGAACATAACAAAAGCTCAAAGAGTTTGACT AATGATGCATGGCGAACATGGTCCCTTGACAAGGGTGGTTTTTCAGATTTTCAAGCTGCT GAAATCCATTCAACTAACAGCAGGAAATCATTTAGACATGATGGCCTAGACATTCTTGCA CAAGATGACGTGCACGGGCCATCTAATGGTGTGGCTGTACATGATTATGATATTAATGAT GTAGACTCTGAAAGAGACGATATACATGCACGCCTTCAAAATTTGGAGTTGGATCTTACT GCCGCTCTTCATACATTAAGATCAAGATTCGACAAGGTTATATCAGATATGTCCGAAGGT GACGGAGCAAAAGCACCAAATGGGCTCTCCGACGATTGGGAATTTGAAGAGACCAAAGTA ATGCAAGCTCAGGAAGAGCTGCGGTCAATCCGTGCAAAAATAGCAGTATTAGAAGGAAAG ATGGCACTGGAGATAATTGAGAAGAACAAAATAATTGAAGAGAAACAAAGAAGGCTTGAT GAAGCTGAGAAGGCCTTGAGTGAGCTCCGTACTGTTTATATTGTGTGGTCTAATCCTGCT TCAGAGGTTCTATTGACTGGATCTTTTGATGGCTGGACAAGCCAGAGAAGAATGGAAAGA TCAGAAAGAGGCACCTTTTCCTTAAACCTGAGGTTGTATCCTGGTAGATATGAGATTAAA TTTATTGTTGATGGTGTTTGGAGGAATGATCCTCTGCGCCCCCTTGTGAGCAATAACGGG CATGAAAACAACCTTCTGACTGTCACTTGA

Peptide Sequence

PEP ID	Os03t0686900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:27408274:27413223:1 gene:Os03g0686900 transcript:Os03t0686900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOURY ENDOSPERM 6 description:CBM48 domain-containing protein, Compound granule formation and starch synthesis (Os03t0686900-01)
Sequence	MLPLLLPLPVTPPPPLPSPTLTLAPASAPRRRLVLLAAAAPHHHHHHRRRRVYRRQRAAP TQTRAPRRTLSASNAARGEEDLEEAIYEFMRRSDKPGAFPTRAELVAAGRADLAAAVDAC GGWLSLGWSSGGAEAGRASSSVGVHPDYPPEAGAAAAAGGASDLAQGAVWASSREAEASP SGRQPETEEEETETKFGTGLDGMLTRLQRERERVRPPLPRSSDGAGGERDNVALMGQSGA PSHSATGGRYTPKVPDNGNIHSYHPQNGALEHNKSSKSLTNDAWRTWSLDKGGFSDFQAA EIHSTNSRKSFRHDGLDILAQDDVHGPSNGVAVHDYDINDVDSERDDIHARLQNLELDLT AALHTLRSRFDKVISDMSEGDGAKAPNGLSDDWEFEETKVMQAQEELRSIRAKIAVLEGK MALEIIEKNKIIEEKQRRLDEAEKALSELRTVYIVWSNPASEVLLTGSFDGWTSQRRMER SERGTFSLNLRLYPGRYEIKFIVDGVWRNDPLRPLVSNNGHENNLLTVT

Transcript Sequence

Transcript ID	Os03t0686900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:27408274:27413223:1 gene:Os03g0686900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOURY ENDOSPERM 6 description:CBM48 domain-containing protein, Compound granule formation and starch synthesis (Os03t0686900-01)
Sequence	GCCCAACCCATCGCGTTTCCCCCCCCGCGGAGAAGCAGCACCGAAATGCGACCGCGATGC TCCCCCTCCTCCTCCCCCTCCCCGTGACCCCTCCTCCTCCTCTCCCCTCCCCAACCCTAA CCCTAGCCCCCGCCTCCGCTCCTCGCCGACGCCTCGTCCTCCTCGCCGCCGCGGCGCCGC ACCACCACCATCACCACCGCCGCCGCCGCGTCTACCGTCGCCAGCGCGCGGCGCCGACGC AGACGCGGGCGCCGAGGAGGACGTTGTCGGCGTCCAATGCGGCCCGCGGGGAGGAGGACC TCGAGGAGGCGATCTACGAGTTCATGCGGCGGTCCGACAAGCCGGGGGCGTTCCCCACCC GCGCCGAGCTCGTCGCCGCGGGGAGGGCCGACCTCGCCGCCGCCGTGGACGCCTGCGGCG GCTGGCTCTCGCTCGGGTGGTCCTCCGGTGGCGCGGAGGCAGGCAGGGCCTCCTCGTCGG TCGGCGTGCACCCTGACTACCCTCCCGAGGCGGGGGCGGCGGCGGCGGCGGGGGGCGCCT CCGACCTAGCGCAGGGAGCCGTGTGGGCGTCGTCCAGGGAGGCGGAAGCTTCGCCGTCCG GGCGCCAGCCGGAGACGGAGGAGGAGGAGACGGAGACGAAATTTGGGACTGGGTTGGACG GGATGCTTACCAGGCTGCAGAGGGAAAGGGAGAGGGTCCGGCCGCCGCTCCCACGGAGCA GCGATGGAGCGGGAGGGGAACGCGACAATGTTGCTTTAATGGGTCAGAGTGGAGCACCCA GTCACTCTGCAACTGGTGGCAGGTACACTCCAAAGGTACCTGATAATGGAAATATACATA GTTATCATCCTCAAAATGGAGCACTAGAACATAACAAAAGCTCAAAGAGTTTGACTAATG ATGCATGGCGAACATGGTCCCTTGACAAGGGTGGTTTTTCAGATTTTCAAGCTGCTGAAA TCCATTCAACTAACAGCAGGAAATCATTTAGACATGATGGCCTAGACATTCTTGCACAAG ATGACGTGCACGGGCCATCTAATGGTGTGGCTGTACATGATTATGATATTAATGATGTAG ACTCTGAAAGAGACGATATACATGCACGCCTTCAAAATTTGGAGTTGGATCTTACTGCCG CTCTTCATACATTAAGATCAAGATTCGACAAGGTTATATCAGATATGTCCGAAGGTGACG GAGCAAAAGCACCAAATGGGCTCTCCGACGATTGGGAATTTGAAGAGACCAAAGTAATGC AAGCTCAGGAAGAGCTGCGGTCAATCCGTGCAAAAATAGCAGTATTAGAAGGAAAGATGG CACTGGAGATAATTGAGAAGAACAAAATAATTGAAGAGAAACAAAGAAGGCTTGATGAAG CTGAGAAGGCCTTGAGTGAGCTCCGTACTGTTTATATTGTGTGGTCTAATCCTGCTTCAG AGGTTCTATTGACTGGATCTTTTGATGGCTGGACAAGCCAGAGAAGAATGGAAAGATCAG AAAGAGGCACCTTTTCCTTAAACCTGAGGTTGTATCCTGGTAGATATGAGATTAAATTTA TTGTTGATGGTGTTTGGAGGAATGATCCTCTGCGCCCCCTTGTGAGCAATAACGGGCATG AAAACAACCTTCTGACTGTCACTTGACTTGAAGCTCCATTTGTCAATCCTGGTAGCATTT TTGTAGATTGTTATCTAGATCTTTATCAACATGATTAGGCCAATCCATCCAGAATGGAAA CAAAAAAAATGAGTGAGCTGGTTAGCTCTGTTCCACCCTGTAATTATCTGCTTCGCCTTA AGTCGTCGTTCTTTTTCTTTGGTAGAGATTCTTACAATTTAAACAGTGTAAGGGTGTTGT CAGAATGCCTCACCCTGTTAGATAGGAGAAGAGAATAGTTGTGTATTCTTTTCTTCCCCG TCTTTTGCCCGGAGAAGTATAGTTGTGTGATGGGTATCCAGGTGTCTGGTTGTACACCTT CATGGAATGTGGTTGTACATCTCTTTTGTGGTGACAAAAACTCCCCCCGCCGGTAACTTT GCACTTGC