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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0685500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:27343321:27346707:-1 gene:Os03g0685500 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHCH domain containing protein. (Os03t0685500-01)
Sequence

ATGGCTCGCCGCAGCTCAGCAAGGTCTCGCCCTGCACCACGTGCTGCTCCCGTGAGGAAC
CCTCCGCAGCCAGCAAGGCAGGCTCCTCCTCCAGCTCCTGCCCAGAACGGAGGTGGCTCT
ATCCTGGGAGGAATTGGTTCCACTATTGCTCAAGGCATGGCTTTTGGTACTGGTAGTGCC
ATGGCACATAGGGCTGTTGATGCTGTAATGGGTCCCCGTACCATTCAGCATGAGACTGTT
GTCTCCGAGGCTGCTGCCTCTGCCACCCCAATGGCCAACGCCACTCCATCTGACTCATGC
AGCATCCATTCCAAGGCCTTCCAAGACTGCATCAACAACTATGGAAGTGACATCAGCAAG
TGCCAATTCTACCTGGATATGCTGAACGAGTGCCGCCGTGGTGGTGCATCTGCTTAG

Peptide Sequence

PEP ID

Os03t0685500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:27343321:27346707:-1 gene:Os03g0685500 transcript:Os03t0685500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHCH domain containing protein. (Os03t0685500-01)
Sequence

MARRSSARSRPAPRAAPVRNPPQPARQAPPPAPAQNGGGSILGGIGSTIAQGMAFGTGSA
MAHRAVDAVMGPRTIQHETVVSEAAASATPMANATPSDSCSIHSKAFQDCINNYGSDISK
CQFYLDMLNECRRGGASA

Transcript Sequence

Transcript ID

Os03t0685500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27343321:27346707:-1 gene:Os03g0685500 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHCH domain containing protein. (Os03t0685500-01)
Sequence

AACCTCCCGACCCGTTGCTGCCCTCTTCATTCGCTCGCTCCCCTCCTCGCCGCGCCGCCA
TCTAGGGTTTCGTCTTCTCCTCCGCCGCCGACCGCCATGGCTCGCCGCAGCTCAGCAAGG
TCTCGCCCTGCACCACGTGCTGCTCCCGTGAGGAACCCTCCGCAGCCAGCAAGGCAGGCT
CCTCCTCCAGCTCCTGCCCAGAACGGAGGTGGCTCTATCCTGGGAGGAATTGGTTCCACT
ATTGCTCAAGGCATGGCTTTTGGTACTGGTAGTGCCATGGCACATAGGGCTGTTGATGCT
GTAATGGGTCCCCGTACCATTCAGCATGAGACTGTTGTCTCCGAGGCTGCTGCCTCTGCC
ACCCCAATGGCCAACGCCACTCCATCTGACTCATGCAGCATCCATTCCAAGGCCTTCCAA
GACTGCATCAACAACTATGGAAGTGACATCAGCAAGTGCCAATTCTACCTGGATATGCTG
AACGAGTGCCGCCGTGGTGGTGCATCTGCTTAGGCTGGTGGCCTTTTGGAACTTTTATTA
ATTGGGCCTCGCGTTACTCTCATGATTATACATGAATAACTTGGCAAATTCATGAACTTG
GTGCCACTGCTTATGGCTGTACTCTGATAATCGTTGGTACGCTTGGGTTTGTGGTATGCT
ACTTCTGGGAGTAGGTACATTCTACTATCCTAAAATGCTAGAACTGCCTACATTGCTCTG
GGTGTCATAAATATTATGGAATTAAACCCGTTATTTCTCGAAACGCTCCGTTGTTTCATG
TTTCGTGG