Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0684700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:27300727:27302989:-1 gene:Os03g0684700 gene_biotype:protein_coding transcript_biotype:protein_coding description:HPP family protein. (Os03t0684700-01)
Sequence

ATGGCATTGCAGCAACGACCGGGGATGCTCGGCATTGGCTGCAGCAACGTCTTGGCACGA
GCAAGGGTGCAGCAATGTCTAGCAGCGGCGTCCCACTCCAATATGCCATGTCTACCCGTC
CTCCTGCATGTCAATGGCAGCAAGAAGCAGGGTAGCAGCTTCCTTTCTTCTCAGAGGATC
GGCTTAAGTAGGAGGAGGAGGAGGAGGGACCTGAGCGGCGTCGTTGTCGCGGAAGTGAGC
GCCGCCGCCGGTGTCACGCCGGCGTCGTCGTCGTCGTCGCCTGGCGGCATCAGCGTCAGC
GATGTTCTTTGGCCCTCCGCCGGTGCATTCCTAGCAATGGCCGTGCTGGGAAGGATGGAT
CAGATGATGGCGTACAAGGGAGTATCATTGACAATTGCCCCTCTCGGAGCAGTCTGCGAT
GTGCTTTTCACCGCTCCAGGCTCACCTGCTGCCAAGAAATACAACATGTTTGTTGCCCAG
ATTGGTTGTGCGGCATTTGGTGTGTTAGCCCTTTCCTTATTTGGGCCTGGATGGTTGGCA
AGAGGTGCTGCTCTTTCTGCATCCATAGCATTCATGACAATTACAGGCGCCTCACACCCT
CCAGCTGCAAGCTTGCCTCTCTTGTTTATTGATGGTCCAAAGTTTCACCACTTGCAACTC
TGGTATGCCCTTTTTCCTGGAGCTGCAGGCTGCATAATTCTTTGCTTGATTCAAGAGGTG
GTGATTTACCTGAAGAAGAATTTCAAGTTTTGA

Peptide Sequence

PEP ID

Os03t0684700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:27300727:27302989:-1 gene:Os03g0684700 transcript:Os03t0684700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HPP family protein. (Os03t0684700-01)
Sequence

MALQQRPGMLGIGCSNVLARARVQQCLAAASHSNMPCLPVLLHVNGSKKQGSSFLSSQRI
GLSRRRRRRDLSGVVVAEVSAAAGVTPASSSSSPGGISVSDVLWPSAGAFLAMAVLGRMD
QMMAYKGVSLTIAPLGAVCDVLFTAPGSPAAKKYNMFVAQIGCAAFGVLALSLFGPGWLA
RGAALSASIAFMTITGASHPPAASLPLLFIDGPKFHHLQLWYALFPGAAGCIILCLIQEV
VIYLKKNFKF

Transcript Sequence

Transcript ID

Os03t0684700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:27300727:27302989:-1 gene:Os03g0684700 gene_biotype:protein_coding transcript_biotype:protein_coding description:HPP family protein. (Os03t0684700-01)
Sequence

GGGGAGAGAGAGAGAGAGAGAGAATGGCATTGCAGCAACGACCGGGGATGCTCGGCATTG
GCTGCAGCAACGTCTTGGCACGAGCAAGGGTGCAGCAATGTCTAGCAGCGGCGTCCCACT
CCAATATGCCATGTCTACCCGTCCTCCTGCATGTCAATGGCAGCAAGAAGCAGGGTAGCA
GCTTCCTTTCTTCTCAGAGGATCGGCTTAAGTAGGAGGAGGAGGAGGAGGGACCTGAGCG
GCGTCGTTGTCGCGGAAGTGAGCGCCGCCGCCGGTGTCACGCCGGCGTCGTCGTCGTCGT
CGCCTGGCGGCATCAGCGTCAGCGATGTTCTTTGGCCCTCCGCCGGTGCATTCCTAGCAA
TGGCCGTGCTGGGAAGGATGGATCAGATGATGGCGTACAAGGGAGTATCATTGACAATTG
CCCCTCTCGGAGCAGTCTGCGATGTGCTTTTCACCGCTCCAGGCTCACCTGCTGCCAAGA
AATACAACATGTTTGTTGCCCAGATTGGTTGTGCGGCATTTGGTGTGTTAGCCCTTTCCT
TATTTGGGCCTGGATGGTTGGCAAGAGGTGCTGCTCTTTCTGCATCCATAGCATTCATGA
CAATTACAGGCGCCTCACACCCTCCAGCTGCAAGCTTGCCTCTCTTGTTTATTGATGGTC
CAAAGTTTCACCACTTGCAACTCTGGTATGCCCTTTTTCCTGGAGCTGCAGGCTGCATAA
TTCTTTGCTTGATTCAAGAGGTGGTGATTTACCTGAAGAAGAATTTCAAGTTTTGATTCA
AGCGGTGCATTACTTCTCGTAGCAATGACATGACTAAAATTCAAGATTGTACCACAATTT
GCTAGAACTGCATTGGGGAGAAATGGAGGAAATGCAGATTTAGTTTCCTTGGTCTTATTT
ACTAAACAGGAAGAGGAGAAAAAGCAGATTGATCGATACCTGATTGTGAATTTGTGATCA
CAGTGCAGAACATGCAAATATGAAGTACATACCAATATCTCATTTAATGAAATCTGATAA
GTGTACAAATAAAATTCCTTCTTTTGTGATTCATAATTGCTTTCTTCATGTAATATACAA
TTTTGCACAAAAAGAAAAAAGGGAGGAAGGAAGTTCACCTCTGTTAATCTGAGGGAGATT
GAACTATTT