Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0681400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:27111495:27116436:-1 gene:Os03g0681400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 25 description:Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19) (Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (PM42). (Os03t0681400-01)
Sequence	ATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGCGTGCAACCGGCTG CAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTCCCTCCGGCTTCAAGCACAAGGTCACC GACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCACGCTCTATGCCGGA GAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGAGGCTCCCCAGGTC ATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGGGCATATCTGTTTA GATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGTTTGTATCAGTATC TTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAATGATCGCTATGTC AGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGGTGGTGGTTTCATGATGACAAA GTGTGA

Peptide Sequence

PEP ID	Os03t0681400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:27111495:27116436:-1 gene:Os03g0681400 transcript:Os03t0681400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 25 description:Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19) (Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (PM42). (Os03t0681400-01)
Sequence	MTSSSSPSRKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAG ETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISI LSMLSSSPAKQRPADNDRYVRNCRNGRSPKETRWWFHDDKV

Transcript Sequence

Transcript ID	Os03t0681400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:27111495:27116436:-1 gene:Os03g0681400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 25 description:Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19) (Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (PM42). (Os03t0681400-01)
Sequence	GCACACCTTTCCCCCCCTCTCTCCCTCCCTCCTCCGCCATCCCTAGCAGCCGCCCCGCAC CCGCGCCCGCACCATGACGAGCTCCTCCTCCCCTTCCCGCAAGGTGCTGAGCAAGATCGC GTGCAACCGGCTGCAGAAGGAGCTCGCGGAGTGGCAGGTCAACCCTCCCTCCGGCTTCAA GCACAAGGTCACCGACAATCTCCAGAGGTGGGTCATCGAGGTCGCGGGGGCTGCGGGCAC GCTCTATGCCGGAGAGACATACCAATTGCAGGTGGACTTCCCTGAGCATTACCCCATGGA GGCTCCCCAGGTCATATTTCTTCATCCAGCGCCAATGCATCCGCACATTTACAGCAATGG GCATATCTGTTTAGATATATTGTATGACTCGTGGTCACCGGCGATGACCGTTAGTTCTGT TTGTATCAGTATCTTGTCCATGTTGTCAAGCTCACCAGCAAAGCAACGTCCTGCCGACAA TGATCGCTATGTCAGGAACTGCCGCAATGGGAGGTCGCCGAAGGAGACCAGGTGGTGGTT TCATGATGACAAAGTGTGATTGGTTCCAACTTCCGGTTGGCTTCTCCTCAGCAACCCTTT TACCCGCCACCCTACCTTTACATGGCGTCCTCCATGGGAGATGATTTAGGCATATTTTTA AGCGATCTATTTGACCGCAAATTAACATGCCTTTGTGGTTTGTAAATGAATGTGAACCTG TATCGAATCCTAGACTTATTAATTACTATACCTTGGATATATAGAATAATTACATGTGTA TCTTGCTTATTGC