Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0674700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:26679255:26682044:1 gene:Os03g0674700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GROWTH-REGULATING FACTOR 9 description:Similar to Growth-regulating factor 3. (Os03t0674700-01)
Sequence

ATGTTTGCTGACTTCTCTGCTGCTGCCATGGAGCTTGGAGAGGTGTTGGGCTTGCAAGGA
CTCACAGTGCCATCCACCAAGGAGGGTGATCTGAGCCTCATCAAGAGAGCTGCTGCTGGT
AGCTTCACCCAGGCTGCTGCTGCATCATACCCTTCCCCCTTTCTTGATGAACAGAAGATG
CTCAGATTCGCCAAGGCTGCTCACACATTGCCATCAGGTTTGGATTTTGGGAGGGAAAAT
GAGCAGAGGTTCTTGTTGTCTAGGACCAAGAGGCCTTTCACTCCCTCACAGTGGATGGAG
CTGGAGCACCAGGCTCTCATTTACAAGTATCTCAATGCAAAGGCCCCTATACCTTCCAGC
CTGCTCATTTCAATCAGCAAAAGCTTCAGATCATCAGCTAACAGAATGAGCTGGAGGCCT
CTCTATCAAGGCTTCCCAAATGCAGACTCTGACCCAGAACCTGGAAGATGCCGTCGAACA
GATGGCAAGAAATGGCGGTGTTCAAAGGAGGCCATGGCCGACCACAAGTATTGTGAGAGG
CACATCAACAGAAACCGCCACCGTTCAAGAAAGCCTGTGGAAAACCAAAGTAGAAAGACT
GTGAAAGAGACACCGTGTGCTGGCTCATTGCCATCTTCTGTCGGGCAGGGCAGCTTCAAG
AAGGCAAAAGTTAATGAAATGAAGCCACGCAGTATCAGCTATTGGACAGATAGTTTGAAC
AGGACAATGGCGAACAAAGAGAAAGGAAACAAAGCTGCTGAAGAAAACAATGGCCCACTG
CTAAATTTAACGAATCAACAGCCAACATTGTCCCTGTTCTCTCAGTTGAAGCAACAGAAC
AAACCGGAGAAGTTCAATACAGCAGGAGACAGTGAATCGATTTCTTCAAATACCATGTTG
AAGCCTTGGGAGAGCAGCAACCAGCAGAACAACAAAAGCATTCCTTTCACCAAGATGCAT
GATCGTGGATGCCTTCAGTCAGTCCTTCAGAATTTCAGCTTGCCTAAGGACGAGAAAATG
GAGTTTCAGAAAAGCAAAGATTCCAATGTCATGACAGTTCCATCAACTTTCTATTCCTCG
CCAGAGGACCCACGCGTCAGCTGCCATGCACCTAATATGGCACAAATGCAAGAGGATAGC
ATCTCAAGTTCTTGGGAGATGCCTCAAGGTGGACCTCTAGGTGAGATCTTGACAAACTCC
AAAAATCCTGACGATTCAATCATGAAACCAGAAGCAAGGCCATATGGTTGGTTACTGAAC
CTCGAGGATCATGCAATGTGA

Peptide Sequence

PEP ID

Os03t0674700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:26679255:26682044:1 gene:Os03g0674700 transcript:Os03t0674700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GROWTH-REGULATING FACTOR 9 description:Similar to Growth-regulating factor 3. (Os03t0674700-01)
Sequence

MFADFSAAAMELGEVLGLQGLTVPSTKEGDLSLIKRAAAGSFTQAAAASYPSPFLDEQKM
LRFAKAAHTLPSGLDFGRENEQRFLLSRTKRPFTPSQWMELEHQALIYKYLNAKAPIPSS
LLISISKSFRSSANRMSWRPLYQGFPNADSDPEPGRCRRTDGKKWRCSKEAMADHKYCER
HINRNRHRSRKPVENQSRKTVKETPCAGSLPSSVGQGSFKKAKVNEMKPRSISYWTDSLN
RTMANKEKGNKAAEENNGPLLNLTNQQPTLSLFSQLKQQNKPEKFNTAGDSESISSNTML
KPWESSNQQNNKSIPFTKMHDRGCLQSVLQNFSLPKDEKMEFQKSKDSNVMTVPSTFYSS
PEDPRVSCHAPNMAQMQEDSISSSWEMPQGGPLGEILTNSKNPDDSIMKPEARPYGWLLN
LEDHAM

Transcript Sequence

Transcript ID

Os03t0674700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:26679255:26682044:1 gene:Os03g0674700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GROWTH-REGULATING FACTOR 9 description:Similar to Growth-regulating factor 3. (Os03t0674700-01)
Sequence

AAAGAGCCACCATCCCATAATATATCACCACACACTTCCTGCCTCCTACTAGAAAGCACA
CACTACACCCTCCTCACTCTCAACCTCAGCCTCACTGTGACTGTCCCCAGCAATGCTCAC
CCCCTCCTCTTCTTCTTCTTCCTCCTCTCCCCTCCTCCTGTCCTTCCAAGATGTTTGCTG
ACTTCTCTGCTGCTGCCATGGAGCTTGGAGAGGTGTTGGGCTTGCAAGGACTCACAGTGC
CATCCACCAAGGAGGGTGATCTGAGCCTCATCAAGAGAGCTGCTGCTGGTAGCTTCACCC
AGGCTGCTGCTGCATCATACCCTTCCCCCTTTCTTGATGAACAGAAGATGCTCAGATTCG
CCAAGGCTGCTCACACATTGCCATCAGGTTTGGATTTTGGGAGGGAAAATGAGCAGAGGT
TCTTGTTGTCTAGGACCAAGAGGCCTTTCACTCCCTCACAGTGGATGGAGCTGGAGCACC
AGGCTCTCATTTACAAGTATCTCAATGCAAAGGCCCCTATACCTTCCAGCCTGCTCATTT
CAATCAGCAAAAGCTTCAGATCATCAGCTAACAGAATGAGCTGGAGGCCTCTCTATCAAG
GCTTCCCAAATGCAGACTCTGACCCAGAACCTGGAAGATGCCGTCGAACAGATGGCAAGA
AATGGCGGTGTTCAAAGGAGGCCATGGCCGACCACAAGTATTGTGAGAGGCACATCAACA
GAAACCGCCACCGTTCAAGAAAGCCTGTGGAAAACCAAAGTAGAAAGACTGTGAAAGAGA
CACCGTGTGCTGGCTCATTGCCATCTTCTGTCGGGCAGGGCAGCTTCAAGAAGGCAAAAG
TTAATGAAATGAAGCCACGCAGTATCAGCTATTGGACAGATAGTTTGAACAGGACAATGG
CGAACAAAGAGAAAGGAAACAAAGCTGCTGAAGAAAACAATGGCCCACTGCTAAATTTAA
CGAATCAACAGCCAACATTGTCCCTGTTCTCTCAGTTGAAGCAACAGAACAAACCGGAGA
AGTTCAATACAGCAGGAGACAGTGAATCGATTTCTTCAAATACCATGTTGAAGCCTTGGG
AGAGCAGCAACCAGCAGAACAACAAAAGCATTCCTTTCACCAAGATGCATGATCGTGGAT
GCCTTCAGTCAGTCCTTCAGAATTTCAGCTTGCCTAAGGACGAGAAAATGGAGTTTCAGA
AAAGCAAAGATTCCAATGTCATGACAGTTCCATCAACTTTCTATTCCTCGCCAGAGGACC
CACGCGTCAGCTGCCATGCACCTAATATGGCACAAATGCAAGAGGATAGCATCTCAAGTT
CTTGGGAGATGCCTCAAGGTGGACCTCTAGGTGAGATCTTGACAAACTCCAAAAATCCTG
ACGATTCAATCATGAAACCAGAAGCAAGGCCATATGGTTGGTTACTGAACCTCGAGGATC
ATGCAATGTGAATCTTCAGGAAATGGAGATCAAGTCGTTAATGAGCTCACCATGGGATAG
CTTTAGTATTGGCGTTACCCATGCATGTTATTCCCTTCTTTCTGTTCTCAAGCTTCTGCA
ATGTAATACCAGCTAATTGCGATTTTCAGTTCTTATGAATTCAGCTGTATCCTTG