Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0666700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:26240893:26244246:-1 gene:Os03g0666700 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os03t0666700-01)
Sequence

ATGGCGATGACGGGGTACAAGTACCAAGCTCAGGAGTTGATGAGAGACTACTTGCTGGCT
GATCCACTGGTTCCGTACACCTCGGTGCTCGTAGGCATTGCCCTGTGCAAGATGGCATAT
GATCTCACAAGGGTACTGAGCTCATTTTACTTCAAGGGATATTCTTCACTGACAAAGATA
CAACGTGTTGAATGGAACAACAGGGGTATGTCCAGTGCACATGCGATCTTTATCACAGCT
ATATCATTATATCTTGTCATGTCTACAGATCTTTTCTCTGATCGCCTTAAGGGGCCTATC
ACATTCCGCAATTCAATCATCTCCACTTTTGCATTAGGGGTTTCTGTGGGCTACTTCATC
GCTGACCTTGCAATGATCTTCTGGTTGTATCCTTCCCTTGGTGGAATGGAATACATCGTC
CATCATACTCTTTCTCTAGTTGCAATAGCTTACACAATGTTGTCAGGGGAGGGTCAGTTC
TACACATACATGGTTCTTATTTCAGAAACAACCACCCCTGAAATTAACTTGAGATGGTTT
CTTGACACAGCTGGACTGAAAAAGTCAAGTGCTTACTTGGTTAATGGTATTCTGATGTTC
GTTGCATGGCTGGTTGCAAGGATACTTCTGTTCATTTACGTATTCTATCACATCTATTTG
CACTACAGTCAGGTAATGCAGATGCATGCTTTTGGGTACTACTTGACATTTATTGTGCCA
TCGGTGCTCTTTGTCATGAACACAATGTGGTTTATGAAGATCTTGAAAGGCGTGAAGAAA
ACATTGGGGAAGTGGTCATGA

Peptide Sequence

PEP ID

Os03t0666700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:26240893:26244246:-1 gene:Os03g0666700 transcript:Os03t0666700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os03t0666700-01)
Sequence

MAMTGYKYQAQELMRDYLLADPLVPYTSVLVGIALCKMAYDLTRVLSSFYFKGYSSLTKI
QRVEWNNRGMSSAHAIFITAISLYLVMSTDLFSDRLKGPITFRNSIISTFALGVSVGYFI
ADLAMIFWLYPSLGGMEYIVHHTLSLVAIAYTMLSGEGQFYTYMVLISETTTPEINLRWF
LDTAGLKKSSAYLVNGILMFVAWLVARILLFIYVFYHIYLHYSQVMQMHAFGYYLTFIVP
SVLFVMNTMWFMKILKGVKKTLGKWS

Transcript Sequence

Transcript ID

Os03t0666700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:26240893:26244246:-1 gene:Os03g0666700 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os03t0666700-01)
Sequence

GCTCCTCCACTGCAGCAAAAAGCAAGCAACCTCACCGAGGAGGGGAATGGAATGGAGCTG
AGCCTTCTCCCCGCCCCACGCGTGTAGCCGCCGCCGCCGGCGAGCAGGTTTGGAGTGGGG
GCGACGCGGCCGTGGAGAGCAGGTCTCGTGTCCGGATCGAATCGAAGGGCGTTTCTAGTG
TCAAAAAGAGAGGAGGGATGGCGATGACGGGGTACAAGTACCAAGCTCAGGAGTTGATGA
GAGACTACTTGCTGGCTGATCCACTGGTTCCGTACACCTCGGTGCTCGTAGGCATTGCCC
TGTGCAAGATGGCATATGATCTCACAAGGGTACTGAGCTCATTTTACTTCAAGGGATATT
CTTCACTGACAAAGATACAACGTGTTGAATGGAACAACAGGGGTATGTCCAGTGCACATG
CGATCTTTATCACAGCTATATCATTATATCTTGTCATGTCTACAGATCTTTTCTCTGATC
GCCTTAAGGGGCCTATCACATTCCGCAATTCAATCATCTCCACTTTTGCATTAGGGGTTT
CTGTGGGCTACTTCATCGCTGACCTTGCAATGATCTTCTGGTTGTATCCTTCCCTTGGTG
GAATGGAATACATCGTCCATCATACTCTTTCTCTAGTTGCAATAGCTTACACAATGTTGT
CAGGGGAGGGTCAGTTCTACACATACATGGTTCTTATTTCAGAAACAACCACCCCTGAAA
TTAACTTGAGATGGTTTCTTGACACAGCTGGACTGAAAAAGTCAAGTGCTTACTTGGTTA
ATGGTATTCTGATGTTCGTTGCATGGCTGGTTGCAAGGATACTTCTGTTCATTTACGTAT
TCTATCACATCTATTTGCACTACAGTCAGGTAATGCAGATGCATGCTTTTGGGTACTACT
TGACATTTATTGTGCCATCGGTGCTCTTTGTCATGAACACAATGTGGTTTATGAAGATCT
TGAAAGGCGTGAAGAAAACATTGGGGAAGTGGTCATGATCGATCCAGGAATGCAGATCCT
AGAACCGCCAACAAGAGTTGGTATTCCAGCGATCATCCGTATGATCTTGATGTGTAAAGT
TATGGACATATATCAGGTTAACTAGGTAAAGCGAATATGTAAAGTGCTAGTAGCAAAAAC
AAGTTTAGATTAGGCCAAATTGCCGCTATTTTCAGCAAGCTGGAATTTCCTAGCCTGTTT
GGCACGGTACTGAAGTTCCCAGCACGCTGTTTCTCCCCTCCCGCATCGTGTGTATATCTG
AAGAAATTTCTGTGGATCAGTTGCCCAACAGTACAACCTCAAATGCTATAGTATTTGTGA
C