Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0666200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:26207742:26211666:-1 gene:Os03g0666200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSWAP70A description:Rac/Rop guanine nucleotide exchange factor, Regulation of immune responses (Os03t0666200-01)
Sequence

ATGGCCACCAACGGCAGCTCCCCGAGGGCGAGGGAGACTGAGAGCAGCCTGGAGAAGGTG
AAGCGGCAGCTCTCGTCGGGGTCCGGGCGGTACCTGCTGCAGGGGCCACTGCTGAAGCGA
TCTGAGACGTTGAGGAAATGGAATGAGAGATGGGTAATTTTAGACCCTACTTCAGGAAAG
ATGGAATACAAAATTCGGAGAAATGAAACTGCCATTAAAGGAACCATTATATTTGATGCT
TCAAGCACTATTACCTTGTCCCCTGTAAATTTCCAAGGGATGCCAAAGTATGATGGCTGC
TGTTTCTACATTGGAACTCCTCAAAAAAAGGATTACTTTCTTTGTGCTGAAACTCCTGGT
GCTGCAAAGGCTTGGGTATCTACGTTGCTTGCAACACAATTAGTACTACAAGCGCATAAA
GAAGCAGTGAATTCTTTGGCTGGGAACGGCTCTCCTGCCACGTTAGGTACAGTTGCTACA
GCAGTTGCTAATGCCAACGCTACTGCTTTGGAGGCTACCAAGGAGATAGAAGCAGCAATG
AAAGTTTCAATGAGGGCAGCTCTTGGGTTGGGTGCAAACAATCCAAAGGAAGGTCAACTT
GATGATTTAACCATCATGAAGGAGACTCTTCGGGTGAAAGATGAGGAGTTGCAGAATTTG
GCCAAGGATATTCGTGCTCGGGATGCTACAATTAAGGAAATAGCAAATAAATTAACAGAG
ACTGCAGAGGCTGCGGAAGCTGCTGCTTCTGCAGCCCATACGATGGATGAACAGAGAAGA
CTTCTATGTTCGGAGATCGAGCGCCTAAGACAAGCAATGGAAAGACAAATGGAACAATCC
ATGCTCAAGCTAAGACAATCTGAAGAAAAGGTAATTAGCTTGAGTAAAGAGAAGGACCAA
TTGCTGAAGGAAAGAGATGCTGCACTTCAGGAGGCTCATATGTGGCGCACTGAGCTAGGG
AAAGCTAGAGAGCAAGCAGTAATACAAGAAGCAACTATTGCCAGAGCAGATGAGAAGGTA
AGGGCATCTGAAGCAGATGCTGCAGCTCGGATAAAGGAAGCTGCTGAAAAGTTACATGCT
GTTGAGAAAGAAAAAGAGGAGCTTCTATCCCTTGTTGGTATTCTTCAATCACAAGTCCAG
AGAGAGCAAAGCAGCACGAAGCAGGTATGCGAAGAGAGATCTGAATCATGCTCCGGCACC
GATAACTCCCCTCCCTTGACAAAGCACGTCGATGCATCAGATGACGATGTCGACAAAGCT
TGTGTGAGTGACTCAAGATCTGTCCTAGTTTCCAATGATAACACTGAAGTCCAACTGGCC
GTGGATGGGGTCGACATCCGTCCTATCGGTGATGCGGAGTGGGGTAGTTTCCAGCAGTCG
GAAGCATTGATCGCCGATGTGCGGGAGGTCTCCCCAGAATCAGAAGGCGGCAGCTTGGAT
ATCCCTGTGGTCAACCCCCCACCAGTGAGCGATCATATCCAGGGAGGCGCAACCCACCCC
TGA

Peptide Sequence

PEP ID

Os03t0666200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:26207742:26211666:-1 gene:Os03g0666200 transcript:Os03t0666200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSWAP70A description:Rac/Rop guanine nucleotide exchange factor, Regulation of immune responses (Os03t0666200-01)
Sequence

MATNGSSPRARETESSLEKVKRQLSSGSGRYLLQGPLLKRSETLRKWNERWVILDPTSGK
MEYKIRRNETAIKGTIIFDASSTITLSPVNFQGMPKYDGCCFYIGTPQKKDYFLCAETPG
AAKAWVSTLLATQLVLQAHKEAVNSLAGNGSPATLGTVATAVANANATALEATKEIEAAM
KVSMRAALGLGANNPKEGQLDDLTIMKETLRVKDEELQNLAKDIRARDATIKEIANKLTE
TAEAAEAAASAAHTMDEQRRLLCSEIERLRQAMERQMEQSMLKLRQSEEKVISLSKEKDQ
LLKERDAALQEAHMWRTELGKAREQAVIQEATIARADEKVRASEADAAARIKEAAEKLHA
VEKEKEELLSLVGILQSQVQREQSSTKQVCEERSESCSGTDNSPPLTKHVDASDDDVDKA
CVSDSRSVLVSNDNTEVQLAVDGVDIRPIGDAEWGSFQQSEALIADVREVSPESEGGSLD
IPVVNPPPVSDHIQGGATHP

Transcript Sequence

Transcript ID

Os03t0666200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:26207742:26211666:-1 gene:Os03g0666200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSWAP70A description:Rac/Rop guanine nucleotide exchange factor, Regulation of immune responses (Os03t0666200-01)
Sequence

GGTCGACGCCACCCCCCACCGGCCGGCCCCGTCTCGCCGTCGCCGCCGTCGTCTCCGCCA
CCCAAAACCCTAGCCCTGCAGCCTCCCCTCCGCAGCTCGCCCCCTCTCCTCGCCATGGCC
ACCAACGGCAGCTCCCCGAGGGCGAGGGAGACTGAGAGCAGCCTGGAGAAGGTGAAGCGG
CAGCTCTCGTCGGGGTCCGGGCGGTACCTGCTGCAGGGGCCACTGCTGAAGCGATCTGAG
ACGTTGAGGAAATGGAATGAGAGATGGGTAATTTTAGACCCTACTTCAGGAAAGATGGAA
TACAAAATTCGGAGAAATGAAACTGCCATTAAAGGAACCATTATATTTGATGCTTCAAGC
ACTATTACCTTGTCCCCTGTAAATTTCCAAGGGATGCCAAAGTATGATGGCTGCTGTTTC
TACATTGGAACTCCTCAAAAAAAGGATTACTTTCTTTGTGCTGAAACTCCTGGTGCTGCA
AAGGCTTGGGTATCTACGTTGCTTGCAACACAATTAGTACTACAAGCGCATAAAGAAGCA
GTGAATTCTTTGGCTGGGAACGGCTCTCCTGCCACGTTAGGTACAGTTGCTACAGCAGTT
GCTAATGCCAACGCTACTGCTTTGGAGGCTACCAAGGAGATAGAAGCAGCAATGAAAGTT
TCAATGAGGGCAGCTCTTGGGTTGGGTGCAAACAATCCAAAGGAAGGTCAACTTGATGAT
TTAACCATCATGAAGGAGACTCTTCGGGTGAAAGATGAGGAGTTGCAGAATTTGGCCAAG
GATATTCGTGCTCGGGATGCTACAATTAAGGAAATAGCAAATAAATTAACAGAGACTGCA
GAGGCTGCGGAAGCTGCTGCTTCTGCAGCCCATACGATGGATGAACAGAGAAGACTTCTA
TGTTCGGAGATCGAGCGCCTAAGACAAGCAATGGAAAGACAAATGGAACAATCCATGCTC
AAGCTAAGACAATCTGAAGAAAAGGTAATTAGCTTGAGTAAAGAGAAGGACCAATTGCTG
AAGGAAAGAGATGCTGCACTTCAGGAGGCTCATATGTGGCGCACTGAGCTAGGGAAAGCT
AGAGAGCAAGCAGTAATACAAGAAGCAACTATTGCCAGAGCAGATGAGAAGGTAAGGGCA
TCTGAAGCAGATGCTGCAGCTCGGATAAAGGAAGCTGCTGAAAAGTTACATGCTGTTGAG
AAAGAAAAAGAGGAGCTTCTATCCCTTGTTGGTATTCTTCAATCACAAGTCCAGAGAGAG
CAAAGCAGCACGAAGCAGGTATGCGAAGAGAGATCTGAATCATGCTCCGGCACCGATAAC
TCCCCTCCCTTGACAAAGCACGTCGATGCATCAGATGACGATGTCGACAAAGCTTGTGTG
AGTGACTCAAGATCTGTCCTAGTTTCCAATGATAACACTGAAGTCCAACTGGCCGTGGAT
GGGGTCGACATCCGTCCTATCGGTGATGCGGAGTGGGGTAGTTTCCAGCAGTCGGAAGCA
TTGATCGCCGATGTGCGGGAGGTCTCCCCAGAATCAGAAGGCGGCAGCTTGGATATCCCT
GTGGTCAACCCCCCACCAGTGAGCGATCATATCCAGGGAGGCGCAACCCACCCCTGAAGG
CCTGGAGCCAAATACATTCTGGGATTGTTGTGATTATTGAGGATAACCGACTGGGATTTG
AATCCTTTCGAGAATTGCTGTGGCAGGAGTTCGCACCGGTGCCTGGTTGTATGTTCATTG
TATTAAAACTATACGACTCAAATAAAAGATAGCGGTGGCTTGTGTGTGTAAATTGTTCGG
TTCAAGCTCTCTTTTGTTACATTCTGACTTCAATGCATTAAAGTAGTAGTAACTGTTAAA
ACGGCAGATTAGCAGTGTGAATGTGAGATCTTGTCAACTTGG