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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0663500-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:26034426:26035297:-1 gene:Os03g0663500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thaumatin-like protein description:Similar to Osmotin precursor. (Os03t0663500-00)
Sequence

CCTCTTCTCCTCCTCGCCGCCGCCGCGAACGCCGCCACGTTCACCATCACCAACAAGTGC
CAGATCACCGTGTGGGCGGCAGCCGTGCCGTCCGGCGGCGGGCAGCAGCTGGACCCGGGG
CAGCAGTGGGTGATCGACGTGCCGGCCGGCACGACGGGCGGGCGCGTGTGGGCGCGCACG
GGCTGCAGCTTCGACGGCAGCGGCAACGGGCGGTGCCAGACGGGCGACTGCGGCGGCGTG
CTGCGGTGCGCGGCGTACGGGCAGCCGCCCAACACGCTGGCGGAGTTCGCGCTGAACCAG
TTCAGCAACCTCGACTTCTTCGACATCTCCCTCATCGACGGATTCAACGTGCCCATGGAC
TTCCTCCCCGCCGGCGACGGCGCCGGGTGCGCCAAGGGCGGGCCGCGGTGCGAGGCGGAC
GTGGCGGGGCAGTGCCCGAGCGAGCTGAGGGCGCCCGGCGGGTGCAACAACGCGTGCACG
GTGTTCAAGCAGGACCAGTACTGCTGCACCGGCTCGGCGGCGAACAACTGCGGCCCGACC
AACTACTCGCAGTTCTTCAAGGGGCTCTGCCCGGACGCCTACAGCTACCCCAAGGACGAC
CAGACGAGCACCTTCACTTGCCCGGCCGGCACCAACTACCAGGTCGTCTTCTGCCCATGA

Peptide Sequence

PEP ID

Os03t0663500-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:26034426:26035297:-1 gene:Os03g0663500 transcript:Os03t0663500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thaumatin-like protein description:Similar to Osmotin precursor. (Os03t0663500-00)
Sequence

PLLLLAAAANAATFTITNKCQITVWAAAVPSGGGQQLDPGQQWVIDVPAGTTGGRVWART
GCSFDGSGNGRCQTGDCGGVLRCAAYGQPPNTLAEFALNQFSNLDFFDISLIDGFNVPMD
FLPAGDGAGCAKGGPRCEADVAGQCPSELRAPGGCNNACTVFKQDQYCCTGSAANNCGPT
NYSQFFKGLCPDAYSYPKDDQTSTFTCPAGTNYQVVFCP

Transcript Sequence

Transcript ID

Os03t0663500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:26034426:26035297:-1 gene:Os03g0663500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thaumatin-like protein description:Similar to Osmotin precursor. (Os03t0663500-00)
Sequence

CCCTCTTCTCCTCCTCGCCGCCGCCGCGAACGCCGCCACGTTCACCATCACCAACAAGTG
CCAGATCACCGTGTGGGCGGCAGCCGTGCCGTCCGGCGGCGGGCAGCAGCTGGACCCGGG
GCAGCAGTGGGTGATCGACGTGCCGGCCGGCACGACGGGCGGGCGCGTGTGGGCGCGCAC
GGGCTGCAGCTTCGACGGCAGCGGCAACGGGCGGTGCCAGACGGGCGACTGCGGCGGCGT
GCTGCGGTGCGCGGCGTACGGGCAGCCGCCCAACACGCTGGCGGAGTTCGCGCTGAACCA
GTTCAGCAACCTCGACTTCTTCGACATCTCCCTCATCGACGGATTCAACGTGCCCATGGA
CTTCCTCCCCGCCGGCGACGGCGCCGGGTGCGCCAAGGGCGGGCCGCGGTGCGAGGCGGA
CGTGGCGGGGCAGTGCCCGAGCGAGCTGAGGGCGCCCGGCGGGTGCAACAACGCGTGCAC
GGTGTTCAAGCAGGACCAGTACTGCTGCACCGGCTCGGCGGCGAACAACTGCGGCCCGAC
CAACTACTCGCAGTTCTTCAAGGGGCTCTGCCCGGACGCCTACAGCTACCCCAAGGACGA
CCAGACGAGCACCTTCACTTGCCCGGCCGGCACCAACTACCAGGTCGTCTTCTGCCCATG
AGGGACGATGACTTGTTAGCTGGCATCTGATCGATGTGATCTTGGTTAGATGTATACACA
ATAAACAAGCATGCATACTTTTTATGCGAGTTTGTATCAGAATCATGAAGAGAAAAGTTA
CTCTGTAATAAAGTAAACCATTCAAAACTGAAGTGGTTTTTCACTTGTAGTTTGGTTAAT
TACACAGGCATGAACGAATCCGTTCAAATTCT