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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0663400-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:26032958:26033800:-1 gene:Os03g0663400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:osmotin protein, Osmotin description:Similar to Thaumatin-like protein. (Os03t0663400-02)
Sequence

ATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCGTGGTGCTCGCCGCC
GCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCG
GCGCTGCCGTCGGGCGACGGCAATCAGCTCGACCCGGGGCAGAGCTGGGCCGTGTACGTG
CCGGCGGGCACCAAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGCGGCTTCATCTCCGGC
GGCAGCCTAGGGCAGTGCCAGACGGGCGACTGCGGCGGCACGCTGCGGTGCGCGGCCGTC
GGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTAC
TTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCG
GGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCGGTGCGCGGCGGAGATCACGCTGCAGTGC
CCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGC
GGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCC
CGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTC
TGCCCATGA

Peptide Sequence

PEP ID

Os03t0663400-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:26032958:26033800:-1 gene:Os03g0663400 transcript:Os03t0663400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:osmotin protein, Osmotin description:Similar to Thaumatin-like protein. (Os03t0663400-02)
Sequence

MASLANSSVHLLLLVVVLAAAADAVTFTIVNKCGYTVWPAALPSGDGNQLDPGQSWAVYV
PAGTKGARVWGRTGCGFISGGSLGQCQTGDCGGTLRCAAVGAPPVTVAEFSLGQASKDDY
FDISLVDGFNAPMAIVPAAAGGRRCPRGGPRCAAEITLQCPGELRAKAGCSNPCRGNSTC
GPTKDTEFFKKLCPETVTYARDGQGTTFTCPAGTDYQIVFCP

Transcript Sequence

Transcript ID

Os03t0663400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:26032958:26033800:-1 gene:Os03g0663400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:osmotin protein, Osmotin description:Similar to Thaumatin-like protein. (Os03t0663400-02)
Sequence

GCTCAGCTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCC
AACTCTTCTGTCCACCTCCTCCTCCTCGTCGTGGTGCTCGCCGCCGCCGCCGATGCGGTG
ACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGC
GACGGCAATCAGCTCGACCCGGGGCAGAGCTGGGCCGTGTACGTGCCGGCGGGCACCAAG
GGCGCGCGCGTGTGGGGGCGCACGGGCTGCGGCTTCATCTCCGGCGGCAGCCTAGGGCAG
TGCCAGACGGGCGACTGCGGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTC
ACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTC
GTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGC
CCCCGCGGCGGGCCTCGGTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGC
GCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGAC
ACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGC
ACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCT
TGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAA
TAAAACCTCGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAATCTT
GTC