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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0659200-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:25800528:25801213:1 gene:Os03g0659200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ferredoxin-like protein with C-terminal extension 1 description:Similar to Ferredoxin. (Os03t0659200-01);Similar to Ferredoxin. (Os03t0659200-02);Similar to ferredoxin. (Os03t0659200-03)
Sequence

CTCCACCTCGCCACCTCCGCCTGCTCCCCGCCGCGCGTCAGGCTCGTCGGCCCCACCACC
GGCCGGAGATCGCCGCTGCGCGCGGCTCCGGCGCCGCCGCCGCCGCGGGCGTACAAGGTG
ACGATCGAGCACGGCGGCGAGTCGCGGGTGGTGGAGGTGGAGGAGGGCGAGACCATCCTG
TCGCGGGCGCTCGACGAGGGCATCGACGTGCCGCACGACTGCAAGCTCGGCGTGTGCATG
ACGTGCCCGGCGCGCCTCGTCGCCGGCGAGGTGGACCAGAGCGACGGCATGCTCAGCGAC
GACGTCGTGGCGCAGGGCTACGCGCTGCTCTGCGCCTCCTACCCGCGCTCCGACTGCACC
ATCCGCGTCATCCCCGAGGACGAGCTGCTCAAGGTCCAGCTCGCCACCGCCGACGACTGA

Peptide Sequence

PEP ID

Os03t0659200-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:25800528:25801213:1 gene:Os03g0659200 transcript:Os03t0659200-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ferredoxin-like protein with C-terminal extension 1 description:Similar to Ferredoxin. (Os03t0659200-01);Similar to Ferredoxin. (Os03t0659200-02);Similar to ferredoxin. (Os03t0659200-03)
Sequence

LHLATSACSPPRVRLVGPTTGRRSPLRAAPAPPPPRAYKVTIEHGGESRVVEVEEGETIL
SRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCT
IRVIPEDELLKVQLATADD

Transcript Sequence

Transcript ID

Os03t0659200-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:25800528:25801213:1 gene:Os03g0659200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ferredoxin-like protein with C-terminal extension 1 description:Similar to Ferredoxin. (Os03t0659200-01);Similar to Ferredoxin. (Os03t0659200-02);Similar to ferredoxin. (Os03t0659200-03)
Sequence

GCTCCACCTCGCCACCTCCGCCTGCTCCCCGCCGCGCGTCAGGCTCGTCGGCCCCACCAC
CGGCCGGAGATCGCCGCTGCGCGCGGCTCCGGCGCCGCCGCCGCCGCGGGCGTACAAGGT
GACGATCGAGCACGGCGGCGAGTCGCGGGTGGTGGAGGTGGAGGAGGGCGAGACCATCCT
GTCGCGGGCGCTCGACGAGGGCATCGACGTGCCGCACGACTGCAAGCTCGGCGTGTGCAT
GACGTGCCCGGCGCGCCTCGTCGCCGGCGAGGTGGACCAGAGCGACGGCATGCTCAGCGA
CGACGTCGTGGCGCAGGGCTACGCGCTGCTCTGCGCCTCCTACCCGCGCTCCGACTGCAC
CATCCGCGTCATCCCCGAGGACGAGCTGCTCAAGGTCCAGCTCGCCACCGCCGACGACTG
AGGCACATCGCGCGCCCGCCGCCGCCGCCGTCGCCGGCGTGTGTGTCATCTCCGGCTAGC
TTGTACAACTTTTTTCCCCTCAAGTGGTATTTCCCGAGATATTTGTGACAATTGCTCCTT
TGCCTAGCTAGTTGTTTCAGTTGTGATAATGTAGTATCTACTATTTTTGTTTTAAGCATT
ATGTAGGATACATAGTATTATTTCTATCTTTTTCATATTCTAAGAGACGAACTACAAAAG
GGTAATGTACAAAAATTTGGGGAGCT