Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0658800-03
CDS Infomation

cds chromosome:IRGSP-1.0:3:25746145:25760690:-1 gene:Os03g0658800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 family protein. (Os03t0658800-01);Hypothetical conserved gene. (Os03t0658800-02);Cytochrome P450 family protein. (Os03t0658800-03)
Sequence

ATGGAAGGTATCCATGCAGGGACGGTGACGATGGCCTGCAGCTGGCTTGTTCTCACGGCC
GCCATGGCTGTGCTAGCCTCTTGGTTGATCCGTTTGGTTTCACTAAAATGGAACAGCAGC
CACCCATGCAAAGCTGATGAAGGCAGCAGGCTGCCGCCAGGGTCGAGGGGCCTTCCTCTT
CTCGGCGAGTCGCTCGAGTTCTTCACTTCGAGCACCTCTCTTGAGCTGCCCGTCTTCTTT
AAGCGCCGTCTTAATAGGTACGGTCCAGTTTTCAGGACGAACATGGTCGGGCAAGACCTG
ATCGTGTGTCTCGATCCGGAGGTGAACAGCTTCGTGTTCCAGCAAGAGGAAAGGCTCTTC
CAGTGCTGGTACCCTGATTCGTTCATGCGGATCATCGGCGCCGACAACATCATCACGACG
CTCGGGTCGTCGCACAAGTACATCAGGAATCTGATCCTTCGGTTGTTCGGCCCTGAAAAC
CTCAGGCGTGCGATGCTCCAGGACGTGCACAGAACGGCTCAGGCCAGCCTGCTCTCCTGG
CTCGATCGACCGAGCATCGAACTCAAGGATGCAGTCTCAAGCATGATATTCAGCGTCACA
GCCAAGAAGTTAATTAGCTATGACTCCTTGGCCTCAGATGGAAAGATGTGGAAACAATTT
GATGCTTTCATTCGAGGTCTACTGGCATTTCCAATTGGCATTCCTGGCACCGCATTCTAC
AAATGTATGCAGGGGCGAAAGAATATCATGAAGATGCTGAAAGAATTGATTGATGAGAGG
AAGGAGGCATCAGGGCGACGGGGAAGCATTGACTTCATTGATGTGCTGCTCGAGGAGCTG
AACGAGGAGAAGCCTTTAATCAGTGAGAACGTTGCGCTGGATTTGATCTTCTTGCTGCTA
TTTGCCAGCTTCGAGACCACGGCATCCGCTATAACCGCAGTGGTCAGATTTCTAACGGAT
AATCCCGAGGCATTGCAAGAATTAGCAGAGGAGCATGATAACATTCAGAAAAGAAGGGTC
GACCTGAACTCTGAAATCACATGGGAGGAATACAAATCTATGAAATTTACATCTCATGTT
ATACATGAAGCTTTAAGGCTTGCTAACATTGCTCCAGTGATGTTTAGAAAAGCCACAGAG
GATGTTCATATAAAAGGTTTTTTTATCCCAAAAGGATCTAAAATTATGATTTGTCCTTCC
ACGGTTCACCTAAACCCTATGATTTATAAGGATCCAAATATATTCAATCCTTGGAGATGG
AAGGATACTGCTGAACCAACCGGTGGTGCCTCCAAGGATTTCATGGCCTTTGGAGGGGGA
CTGCGCTTGTGTGTTGGTGCAGATTTCGCTAAGCTGCAGACGGCGATCTTCCTCCACTGC
TTAGTCACCAAGTATAGATGGAAAGCGATCAAGGGAGGAACAATGGTGCTTGGTCCAGGA
CTACGATTCCCTGAAGGTTTTCACATCCAACTTTTCCCAAAACCTTGA

Peptide Sequence

PEP ID

Os03t0658800-03
PEP Infomation

pep chromosome:IRGSP-1.0:3:25746145:25760690:-1 gene:Os03g0658800 transcript:Os03t0658800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 family protein. (Os03t0658800-01);Hypothetical conserved gene. (Os03t0658800-02);Cytochrome P450 family protein. (Os03t0658800-03)
Sequence

MEGIHAGTVTMACSWLVLTAAMAVLASWLIRLVSLKWNSSHPCKADEGSRLPPGSRGLPL
LGESLEFFTSSTSLELPVFFKRRLNRYGPVFRTNMVGQDLIVCLDPEVNSFVFQQEERLF
QCWYPDSFMRIIGADNIITTLGSSHKYIRNLILRLFGPENLRRAMLQDVHRTAQASLLSW
LDRPSIELKDAVSSMIFSVTAKKLISYDSLASDGKMWKQFDAFIRGLLAFPIGIPGTAFY
KCMQGRKNIMKMLKELIDERKEASGRRGSIDFIDVLLEELNEEKPLISENVALDLIFLLL
FASFETTASAITAVVRFLTDNPEALQELAEEHDNIQKRRVDLNSEITWEEYKSMKFTSHV
IHEALRLANIAPVMFRKATEDVHIKGFFIPKGSKIMICPSTVHLNPMIYKDPNIFNPWRW
KDTAEPTGGASKDFMAFGGGLRLCVGADFAKLQTAIFLHCLVTKYRWKAIKGGTMVLGPG
LRFPEGFHIQLFPKP

Transcript Sequence

Transcript ID

Os03t0658800-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:25746145:25760690:-1 gene:Os03g0658800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 family protein. (Os03t0658800-01);Hypothetical conserved gene. (Os03t0658800-02);Cytochrome P450 family protein. (Os03t0658800-03)
Sequence

AATGTGGGCAATATAGTATATATCGAGGTGCCACAAATAAATGGAAGGTATCCATGCAGG
GACGGTGACGATGGCCTGCAGCTGGCTTGTTCTCACGGCCGCCATGGCTGTGCTAGCCTC
TTGGTTGATCCGTTTGGTTTCACTAAAATGGAACAGCAGCCACCCATGCAAAGCTGATGA
AGGCAGCAGGCTGCCGCCAGGGTCGAGGGGCCTTCCTCTTCTCGGCGAGTCGCTCGAGTT
CTTCACTTCGAGCACCTCTCTTGAGCTGCCCGTCTTCTTTAAGCGCCGTCTTAATAGGTA
CGGTCCAGTTTTCAGGACGAACATGGTCGGGCAAGACCTGATCGTGTGTCTCGATCCGGA
GGTGAACAGCTTCGTGTTCCAGCAAGAGGAAAGGCTCTTCCAGTGCTGGTACCCTGATTC
GTTCATGCGGATCATCGGCGCCGACAACATCATCACGACGCTCGGGTCGTCGCACAAGTA
CATCAGGAATCTGATCCTTCGGTTGTTCGGCCCTGAAAACCTCAGGCGTGCGATGCTCCA
GGACGTGCACAGAACGGCTCAGGCCAGCCTGCTCTCCTGGCTCGATCGACCGAGCATCGA
ACTCAAGGATGCAGTCTCAAGCATGATATTCAGCGTCACAGCCAAGAAGTTAATTAGCTA
TGACTCCTTGGCCTCAGATGGAAAGATGTGGAAACAATTTGATGCTTTCATTCGAGGTCT
ACTGGCATTTCCAATTGGCATTCCTGGCACCGCATTCTACAAATGTATGCAGGGGCGAAA
GAATATCATGAAGATGCTGAAAGAATTGATTGATGAGAGGAAGGAGGCATCAGGGCGACG
GGGAAGCATTGACTTCATTGATGTGCTGCTCGAGGAGCTGAACGAGGAGAAGCCTTTAAT
CAGTGAGAACGTTGCGCTGGATTTGATCTTCTTGCTGCTATTTGCCAGCTTCGAGACCAC
GGCATCCGCTATAACCGCAGTGGTCAGATTTCTAACGGATAATCCCGAGGCATTGCAAGA
ATTAGCAGAGGAGCATGATAACATTCAGAAAAGAAGGGTCGACCTGAACTCTGAAATCAC
ATGGGAGGAATACAAATCTATGAAATTTACATCTCATGTTATACATGAAGCTTTAAGGCT
TGCTAACATTGCTCCAGTGATGTTTAGAAAAGCCACAGAGGATGTTCATATAAAAGGTTT
TTTTATCCCAAAAGGATCTAAAATTATGATTTGTCCTTCCACGGTTCACCTAAACCCTAT
GATTTATAAGGATCCAAATATATTCAATCCTTGGAGATGGAAGGATACTGCTGAACCAAC
CGGTGGTGCCTCCAAGGATTTCATGGCCTTTGGAGGGGGACTGCGCTTGTGTGTTGGTGC
AGATTTCGCTAAGCTGCAGACGGCGATCTTCCTCCACTGCTTAGTCACCAAGTATAGATG
GAAAGCGATCAAGGGAGGAACAATGGTGCTTGGTCCAGGACTACGATTCCCTGAAGGTTT
TCACATCCAACTTTTCCCAAAACCTTGAAGTACCGGGGCCAGATACTTCTAGCCCCTACA
CAATATATGTAGCTCAGAAGCAACGTTTGAGATCTATATTGTTGATGATTGGTACTTCGA
TGTAATTTCCATTAATTTTCTGCTGTTCCCATTAGTTCACTGCTGAATGAGCTATGCTTA
TTCTTCACTTTGCCATAAATGTTGTGTGATGTCCAAATATCACAAATAAATGTAGATATG
TTTGAGTCCTCTT