Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0657100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25639131:25642187:-1 gene:Os03g0657100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 24, U-box protein 24 description:Armadillo-like helical domain containing protein. (Os03t0657100-01);Similar to predicted protein. (Os03t0657100-02)
Sequence	ATGGCGGGCGAGGGCGTGGAGATGTCGGAGGAGGAAGGCGCGTTCGAGGCGTTCGTGTGC CCGCTGACGAAGCAGGTGATGCGCGACCCGGTGACGATCGAGACCGGGCAGACGTTCGAG CGGGAGGCGATCCTCAAGTGGTTCCGCGAGTGCCGGGACAACGGCCGCCGCCCGACGTGC CCGCTCACGCAGCGCGAGCTCCGCGACACGGAGGTGTCGCCCAGCGTGGCGCTCCGCAGC GTCATCCACGAGTGGCGGGCGCGCAACGAGGAGAAGGACCTCGACCGCGCCTGCGCCTCC CTCGTCGGCGGCTTCGCCGGCCACGCCGGCGACGAGGAGGAGGAGGAGTCCGCGCTCCGT GCCCTGGTGCACGTCTCCCAGATATGCCAGCGGAGCGCCGCCAGCAAGGACCTCGTCCGC CGCCGCGGCGTCCTCCGCGCCGTCGCCGAGATGCTCAAGAGCGGCAGCCGACGGCTCCGC CTCAAGTCCCTCCAGGTCCTCCGCGTCCTCGTCGAAGACAACGACGATAACAAGGAGGAG TTGGGGAAGGGCGACACGATACGCACCATCATCAAGTTCTTGTCGAACGAGCATGTCCAG GAGCGGGAGCTGGCGGTGTCGCTGCTGCACGAGCTGTCCGGGCACGAGCCGACGTGCGAG CGGATCGGCGCGGTGTACGGCGCCATCCTGCTGCTGGTCGGGATGGGGAGCAGCAAGTCG GAGAGCGCCGTCGCCGTCGACAAGGCGGAGAGCACGCTCCGCAACCTCGACCGCTTCGAC GCCAACGTCAAGCAGATGGCCGACAACGGCAGGCTGCAGCCGCTCCTCACCAGGCTGCTC CGCGGCGAGCCCGACACGCGGGTCGCCATGGCCGACTACCTCGGCGAGCTCGCCCTGGCG AACGACGACAAGGCCGCGGTGGCCGAGCAGGCCGGCCCGCTGCTGGTGGGGATGCTCCGG ACCGGCGCCACGCCGGCGAAGGAGGCCACGCTCAAGGCGCTCAGGGAGATCTCATCCAGC GAGGCGAGCGCCAAGCTGCTGCTGCAGCGCGCCGGCGTCCTGCCCCCGCTCGTCAACGAT GTCCTCTTCTCCACGGGACACCTACCGATGAAGCTCAAGGAGCTCGCCGCCACCATCCTC GCCAACCTCGTCGCCTCAGGCGCCGATTTCCGTTCCATCCCACTCGACGACGACGAAGAC GACGACGGCGGCGGCGGCGGACGTGGGCGCCGCAGGACGCTCCTGTCGGAGGACGTCGTG CATAGCCAGCTCCACCTCATCAGCAACACCGGCCCCGCCATCGGATGCAGACTCCTCAGC GTCCTCGCCGGGTTGACCAGCTCCCGCGCGACGGTGGCCGACGTCGTCGCGGCGGTCAAG AGCTCCGGCGCCACAATCAGCCTCATCCAGTTCATCGAGGCAGCGCACCGGGACATCCGC GTCGAGTCCCTCAAGCTCCTGCGCAACCTCGCCCCCTACATGGGCGCCGAGCTCGCCGAC GCCCTGGGCGGAAGCCTGAGCAGCCTCCTCCGGGCCATCTCCTCCGACGGCGGCGGCGTC ACGGAGGAGCAGGCGGCTGCCGTGGGGTTGCTCGGCGACCTCCCGGAGGGTGACTCCAGC CTGACCAGGCAGCTGTTCGACCTGGGCGCGTTCAGGGCGCTGGCCCCGAAGCTGGCGGAG CTCCGGCGGGGCACCATCCGCGGCGGGAACCGGTACGTGACGCCGCTGACGGAGGGCGTG GTGAAGGTGATGTACCGGGTGACGTGCGCGCTGGAGGAGGACGCGGAGTACGTGGAGTTC GCGCGGGAGGCCGGCCTGGCGCCGCTGTTCGTCGAGCTGCTCCACACCAACGGCATGGAC ACGGTGCAGCTCTACTCGGCAATGGCGCTGGAGAAGCTGTCGCTGCAGTCGAGCCACCTG ACGGCCATCCCGGCGCCGCCGTCGCCACCGGCGGGGTTCGGGTGCGCGTGCTTGGGGAGG AGACCCGCGGCGGCGGCGGTGCCCGCGGGGGTGTGCCGCGTGCACGGCGGGTTCTGCTCG CTGCGGGAGACGTTCTGCCTGGCGCAGGCGGACGGCGGGAAGGCGGTGGAGCGGCTGGTG GCGTGCCTGGACCACCTGGACGGGAGGGTGGTGGAGGCGGCGCTGGCGGCGCTGTCGACG CTGGTGTGCGACGGCGTGGACGCGAGGGAAGGGGTGGTGGTGCTGGGGGAAGCCGACGGG CTGCGCCCGGTGGTGGACATCATGGTGGAGAGCCGCACGGAGGCGCTGCAGCGGCGGGCG GTGTGGGCGGTGGAGCGCATCCTGCGGGTGGAGGAGATCGCCGGGGAGGTGGCCGCCGAC CAGACGGTGGCGTCGGCGCTCGTCGAGGCGTACCGCAACGGCGACCCGCGCACCCGGCAG ACGGCGGAGCGCGCGCTCCGCCACCTCGACCGGATCCCCAACTTCTCCGCCGCCTTCCAA TCCAAACGCTCATAG

Peptide Sequence

PEP ID	Os03t0657100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25639131:25642187:-1 gene:Os03g0657100 transcript:Os03t0657100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 24, U-box protein 24 description:Armadillo-like helical domain containing protein. (Os03t0657100-01);Similar to predicted protein. (Os03t0657100-02)
Sequence	MAGEGVEMSEEEGAFEAFVCPLTKQVMRDPVTIETGQTFEREAILKWFRECRDNGRRPTC PLTQRELRDTEVSPSVALRSVIHEWRARNEEKDLDRACASLVGGFAGHAGDEEEEESALR ALVHVSQICQRSAASKDLVRRRGVLRAVAEMLKSGSRRLRLKSLQVLRVLVEDNDDNKEE LGKGDTIRTIIKFLSNEHVQERELAVSLLHELSGHEPTCERIGAVYGAILLLVGMGSSKS ESAVAVDKAESTLRNLDRFDANVKQMADNGRLQPLLTRLLRGEPDTRVAMADYLGELALA NDDKAAVAEQAGPLLVGMLRTGATPAKEATLKALREISSSEASAKLLLQRAGVLPPLVND VLFSTGHLPMKLKELAATILANLVASGADFRSIPLDDDEDDDGGGGGRGRRRTLLSEDVV HSQLHLISNTGPAIGCRLLSVLAGLTSSRATVADVVAAVKSSGATISLIQFIEAAHRDIR VESLKLLRNLAPYMGAELADALGGSLSSLLRAISSDGGGVTEEQAAAVGLLGDLPEGDSS LTRQLFDLGAFRALAPKLAELRRGTIRGGNRYVTPLTEGVVKVMYRVTCALEEDAEYVEF AREAGLAPLFVELLHTNGMDTVQLYSAMALEKLSLQSSHLTAIPAPPSPPAGFGCACLGR RPAAAAVPAGVCRVHGGFCSLRETFCLAQADGGKAVERLVACLDHLDGRVVEAALAALST LVCDGVDAREGVVVLGEADGLRPVVDIMVESRTEALQRRAVWAVERILRVEEIAGEVAAD QTVASALVEAYRNGDPRTRQTAERALRHLDRIPNFSAAFQSKRS

Transcript Sequence

Transcript ID	Os03t0657100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25639131:25642187:-1 gene:Os03g0657100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 24, U-box protein 24 description:Armadillo-like helical domain containing protein. (Os03t0657100-01);Similar to predicted protein. (Os03t0657100-02)
Sequence	GTTCTGGCTCGCACACAGCTCAGCAGCTAACTAGTCCAATGGAGCAGCTAGCAGGTGAGA AAATAAAAGCCAAGAACAAGTCGACGTGGCCGCCTTTCGTTACCCACCAACCCAACCTCG TTCTACGGTACGCCACGCCTCCCCTCCCCTCCTCCGCCGCCGCCGCCTCAATTAGACCGA AGCTCTAAACTCCGGCGAGCCCTCGCCGCCGCCTGCGTGGAGGGGAGGTCGGGAGGAGGG GGTTGATGGCGGGCGAGGGCGTGGAGATGTCGGAGGAGGAAGGCGCGTTCGAGGCGTTCG TGTGCCCGCTGACGAAGCAGGTGATGCGCGACCCGGTGACGATCGAGACCGGGCAGACGT TCGAGCGGGAGGCGATCCTCAAGTGGTTCCGCGAGTGCCGGGACAACGGCCGCCGCCCGA CGTGCCCGCTCACGCAGCGCGAGCTCCGCGACACGGAGGTGTCGCCCAGCGTGGCGCTCC GCAGCGTCATCCACGAGTGGCGGGCGCGCAACGAGGAGAAGGACCTCGACCGCGCCTGCG CCTCCCTCGTCGGCGGCTTCGCCGGCCACGCCGGCGACGAGGAGGAGGAGGAGTCCGCGC TCCGTGCCCTGGTGCACGTCTCCCAGATATGCCAGCGGAGCGCCGCCAGCAAGGACCTCG TCCGCCGCCGCGGCGTCCTCCGCGCCGTCGCCGAGATGCTCAAGAGCGGCAGCCGACGGC TCCGCCTCAAGTCCCTCCAGGTCCTCCGCGTCCTCGTCGAAGACAACGACGATAACAAGG AGGAGTTGGGGAAGGGCGACACGATACGCACCATCATCAAGTTCTTGTCGAACGAGCATG TCCAGGAGCGGGAGCTGGCGGTGTCGCTGCTGCACGAGCTGTCCGGGCACGAGCCGACGT GCGAGCGGATCGGCGCGGTGTACGGCGCCATCCTGCTGCTGGTCGGGATGGGGAGCAGCA AGTCGGAGAGCGCCGTCGCCGTCGACAAGGCGGAGAGCACGCTCCGCAACCTCGACCGCT TCGACGCCAACGTCAAGCAGATGGCCGACAACGGCAGGCTGCAGCCGCTCCTCACCAGGC TGCTCCGCGGCGAGCCCGACACGCGGGTCGCCATGGCCGACTACCTCGGCGAGCTCGCCC TGGCGAACGACGACAAGGCCGCGGTGGCCGAGCAGGCCGGCCCGCTGCTGGTGGGGATGC TCCGGACCGGCGCCACGCCGGCGAAGGAGGCCACGCTCAAGGCGCTCAGGGAGATCTCAT CCAGCGAGGCGAGCGCCAAGCTGCTGCTGCAGCGCGCCGGCGTCCTGCCCCCGCTCGTCA ACGATGTCCTCTTCTCCACGGGACACCTACCGATGAAGCTCAAGGAGCTCGCCGCCACCA TCCTCGCCAACCTCGTCGCCTCAGGCGCCGATTTCCGTTCCATCCCACTCGACGACGACG AAGACGACGACGGCGGCGGCGGCGGACGTGGGCGCCGCAGGACGCTCCTGTCGGAGGACG TCGTGCATAGCCAGCTCCACCTCATCAGCAACACCGGCCCCGCCATCGGATGCAGACTCC TCAGCGTCCTCGCCGGGTTGACCAGCTCCCGCGCGACGGTGGCCGACGTCGTCGCGGCGG TCAAGAGCTCCGGCGCCACAATCAGCCTCATCCAGTTCATCGAGGCAGCGCACCGGGACA TCCGCGTCGAGTCCCTCAAGCTCCTGCGCAACCTCGCCCCCTACATGGGCGCCGAGCTCG CCGACGCCCTGGGCGGAAGCCTGAGCAGCCTCCTCCGGGCCATCTCCTCCGACGGCGGCG GCGTCACGGAGGAGCAGGCGGCTGCCGTGGGGTTGCTCGGCGACCTCCCGGAGGGTGACT CCAGCCTGACCAGGCAGCTGTTCGACCTGGGCGCGTTCAGGGCGCTGGCCCCGAAGCTGG CGGAGCTCCGGCGGGGCACCATCCGCGGCGGGAACCGGTACGTGACGCCGCTGACGGAGG GCGTGGTGAAGGTGATGTACCGGGTGACGTGCGCGCTGGAGGAGGACGCGGAGTACGTGG AGTTCGCGCGGGAGGCCGGCCTGGCGCCGCTGTTCGTCGAGCTGCTCCACACCAACGGCA TGGACACGGTGCAGCTCTACTCGGCAATGGCGCTGGAGAAGCTGTCGCTGCAGTCGAGCC ACCTGACGGCCATCCCGGCGCCGCCGTCGCCACCGGCGGGGTTCGGGTGCGCGTGCTTGG GGAGGAGACCCGCGGCGGCGGCGGTGCCCGCGGGGGTGTGCCGCGTGCACGGCGGGTTCT GCTCGCTGCGGGAGACGTTCTGCCTGGCGCAGGCGGACGGCGGGAAGGCGGTGGAGCGGC TGGTGGCGTGCCTGGACCACCTGGACGGGAGGGTGGTGGAGGCGGCGCTGGCGGCGCTGT CGACGCTGGTGTGCGACGGCGTGGACGCGAGGGAAGGGGTGGTGGTGCTGGGGGAAGCCG ACGGGCTGCGCCCGGTGGTGGACATCATGGTGGAGAGCCGCACGGAGGCGCTGCAGCGGC GGGCGGTGTGGGCGGTGGAGCGCATCCTGCGGGTGGAGGAGATCGCCGGGGAGGTGGCCG CCGACCAGACGGTGGCGTCGGCGCTCGTCGAGGCGTACCGCAACGGCGACCCGCGCACCC GGCAGACGGCGGAGCGCGCGCTCCGCCACCTCGACCGGATCCCCAACTTCTCCGCCGCCT TCCAATCCAAACGCTCATAGCCTCTCCACAGATCTGCCATTGCCAATGTGCAACTGCAAC TCTGCAAGGCTCTCCCTTCGCTGATTATCCCATTCCCCTCTTTCATTTCACTTGCTCTTT TTCCCATTCCCCTCTCACTTCACTTGCTCTTTTGCTGGATCGGATTGCTGATTTTTTTTT CTTTTTTTTGGTTTGTTTACAGCAGCATGATGCTTGTATAGCATAATCGTCTTAATTCTT TCAAAGCAAAATGGATGAAACAAAATTGGTTGC