Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0656900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:25627120:25631135:1 gene:Os03g0656900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT 1 description:Plastid RNA-binding protein, Regulation of chloroplast RNA metabolism, Early chloroplast development under cold stress (Os03t0656900-01)
Sequence	ATGGAAGCGACGGGCGCCGCCGTATCCGCCTTCTCCACCGCGTCCTCGTCGAGTCCCGCG GCGCCTAGACACGGCCGTCTCCTGGCGAGCCCCGCGGCGTGGCGCAGCGCACGGACGCTG CCACCACGGGCCGTCGCCTCCTCCCGCGCGACGGTCCTCGTCTCGAACCCTCCTCCGCCG CCGCTGCCGCCGACACCCGCTCCTGCTGCGGTCGCGCCCTCCAAGGTCGACCGGTCCGGG CGGTTCTGTAGCCCCCGCGCCGCTCGCGAGCTCGCGCTGATGATTTCCTACGCGGCTTGC CTTGAGGGCGCCGACGTGGTGCGGCTCTTCGACCGCAGAATCAGCGCGAGAAGAGAACCT GGCTATGTTTTCGATAAGGCGTGCGTGGTGAACTACAACCATATGAGCTTCGGTGGGGGA CCTCTGGAGGTCGGGACAGAGGAGGAGGCTGAGAAGCTCATGAGTCAGAACGAGAAGGAT TCAGCAAATGAAGCAGAAGTTCTTTCAGCTCCTCCAAAGCTGGTGTACAACAACTTTGTG TTACGACTGGCTCGAGAAATTTTAGTGGCTGTTGCCAGTGGATGGGACAAGCATGTTGAT ATCATCAACAAAATAACTCCCCAGAATTGGAAGGACGAACCTGTTGCAAGGATCCTTGAA CTTTGTATTCTTCATATTGCCATGGCAGAGATGACATCAAAAGGAACACCTCACAAAATT GTCATTAACGAGGCTGTGGATTTGGCAAAACGGTTCTGTGATGGTGGTGCTCCTCGGGTA ATCAATGGATGCCTTCGGACATTTGTGAAGGATCACATGAACATTGACACCAGTCAGCCA GCTCCAGCTGAGTCAAAAGCGTGA

Peptide Sequence

PEP ID	Os03t0656900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:25627120:25631135:1 gene:Os03g0656900 transcript:Os03t0656900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT 1 description:Plastid RNA-binding protein, Regulation of chloroplast RNA metabolism, Early chloroplast development under cold stress (Os03t0656900-01)
Sequence	MEATGAAVSAFSTASSSSPAAPRHGRLLASPAAWRSARTLPPRAVASSRATVLVSNPPPP PLPPTPAPAAVAPSKVDRSGRFCSPRAARELALMISYAACLEGADVVRLFDRRISARREP GYVFDKACVVNYNHMSFGGGPLEVGTEEEAEKLMSQNEKDSANEAEVLSAPPKLVYNNFV LRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHKI VINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQPAPAESKA

Transcript Sequence

Transcript ID	Os03t0656900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:25627120:25631135:1 gene:Os03g0656900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIRESCENT 1 description:Plastid RNA-binding protein, Regulation of chloroplast RNA metabolism, Early chloroplast development under cold stress (Os03t0656900-01)
Sequence	ATTTCTCTTTCTCCCACCTCCACCGGCGACGCCACCGCCGCCGCCTCCTCCTCCTCCGCC TCTCTACGGCAGCCTCGCCGCCGCGCCGCGCAGCGCAGCGCAGAGCAACATGGAAGCGAC GGGCGCCGCCGTATCCGCCTTCTCCACCGCGTCCTCGTCGAGTCCCGCGGCGCCTAGACA CGGCCGTCTCCTGGCGAGCCCCGCGGCGTGGCGCAGCGCACGGACGCTGCCACCACGGGC CGTCGCCTCCTCCCGCGCGACGGTCCTCGTCTCGAACCCTCCTCCGCCGCCGCTGCCGCC GACACCCGCTCCTGCTGCGGTCGCGCCCTCCAAGGTCGACCGGTCCGGGCGGTTCTGTAG CCCCCGCGCCGCTCGCGAGCTCGCGCTGATGATTTCCTACGCGGCTTGCCTTGAGGGCGC CGACGTGGTGCGGCTCTTCGACCGCAGAATCAGCGCGAGAAGAGAACCTGGCTATGTTTT CGATAAGGCGTGCGTGGTGAACTACAACCATATGAGCTTCGGTGGGGGACCTCTGGAGGT CGGGACAGAGGAGGAGGCTGAGAAGCTCATGAGTCAGAACGAGAAGGATTCAGCAAATGA AGCAGAAGTTCTTTCAGCTCCTCCAAAGCTGGTGTACAACAACTTTGTGTTACGACTGGC TCGAGAAATTTTAGTGGCTGTTGCCAGTGGATGGGACAAGCATGTTGATATCATCAACAA AATAACTCCCCAGAATTGGAAGGACGAACCTGTTGCAAGGATCCTTGAACTTTGTATTCT TCATATTGCCATGGCAGAGATGACATCAAAAGGAACACCTCACAAAATTGTCATTAACGA GGCTGTGGATTTGGCAAAACGGTTCTGTGATGGTGGTGCTCCTCGGGTAATCAATGGATG CCTTCGGACATTTGTGAAGGATCACATGAACATTGACACCAGTCAGCCAGCTCCAGCTGA GTCAAAAGCGTGAAGTTTTTGCAAATATGAAAATATGAATCATCACAAATATGATTCAAA GAATAGAAGCACGGAGAAAATCCTGCTCTCTTTGTCTGATCTCCTTTGGTTGTTTAAAGA TTGATTGGTGAAGTTGAAAGGAGGCAAACATGCTGGACTTGTGGAGAACTAGAAGTATCT TCAATATTTAGCTGGTGGTTAGACTAGATATGTTGAGCCATATACTGATGATGCACTCTT CTTGAAGAACTAAATGACACTACTTCTAACAGCTTTTGCCATGCTGATTCCTGTGCTTAA TGGGACAAGAGAACCTGTATCATAGTGTATGTGTAAAGTTGCAAGGTAAGGGTTGCATCT CTCAATTTCACAATAACGTGCTTGAGCTGCTGAGTAAGTTGGGAGTTGGGAGTTTGCAGC TGATACTATGGAAGATGCATTTTCTCCAAGATTTGGATATGATATATTGTGTAATTCTAC CTGCACACGAGTTCTGTTCAAATATAAATTTGGTACACCTCTAATAGTATTTGTATTGTA TATGGCTGCAAACTTTTCCTACGAAATTCTTTGTAAGTAGCATGGGTTGTAACCTGCTTA ACGATCCAATGATTGCTGCTTTAATTAATAAGTTTGTTGC